Wall clock time and date at job start Mon Mar 8 2021 05:54:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47192 * 2 1 4 4 C 1.50707 * 109.46861 * 240.00291 * 2 1 3 5 5 C 1.33327 * 125.95268 * 299.99732 * 4 2 1 6 6 N 1.32116 * 114.57817 * 180.02562 * 5 4 2 7 7 C 1.29683 * 116.86896 * 0.02562 * 6 5 4 8 8 N 1.38616 * 124.95190 * 179.97438 * 7 6 5 9 9 C 1.46496 * 119.99624 * 0.02702 * 8 7 6 10 10 H 1.09000 * 112.91246 * 23.74668 * 9 8 7 11 11 C 1.53786 * 113.61518 * 154.99909 * 9 8 7 12 12 C 1.53781 * 87.17350 * 89.15486 * 11 9 8 13 13 H 1.08997 * 113.61223 * 270.84552 * 12 11 9 14 14 C 1.50703 * 113.61417 * 139.93966 * 12 11 9 15 15 C 1.38217 * 119.99153 * 120.00089 * 14 12 11 16 16 C 1.38264 * 120.01470 * 179.97438 * 15 14 12 17 17 C 1.38187 * 120.01251 * 0.02562 * 16 15 14 18 18 C 1.38348 * 119.99515 * 359.97438 * 17 16 15 19 19 Br 1.89091 * 120.01566 * 179.97438 * 18 17 16 20 20 C 1.38240 * 119.99442 * 299.72569 * 14 12 11 21 21 C 1.53782 * 87.08260 * 25.39213 * 12 11 9 22 22 S 1.70966 * 110.10066 * 0.24180 * 7 6 5 23 23 H 0.96700 * 114.00101 * 299.99991 * 1 2 3 24 24 H 1.09000 * 109.46931 * 120.00470 * 2 1 3 25 25 H 1.48503 * 109.99612 * 178.67997 * 3 2 1 26 26 H 1.48489 * 110.00339 * 300.00121 * 3 2 1 27 27 H 1.08001 * 122.71091 * 0.02911 * 5 4 2 28 28 H 0.97001 * 120.00258 * 180.02562 * 8 7 6 29 29 H 1.09002 * 113.61357 * 334.56403 * 11 9 8 30 30 H 1.09002 * 113.61608 * 203.74565 * 11 9 8 31 31 H 1.07998 * 119.99186 * 0.02562 * 15 14 12 32 32 H 1.08001 * 119.99233 * 180.02562 * 16 15 14 33 33 H 1.08002 * 120.00591 * 180.02562 * 17 16 15 34 34 H 1.07996 * 120.00468 * 359.97438 * 20 14 12 35 35 H 1.08997 * 113.61668 * 89.11298 * 21 12 11 36 36 H 1.08994 * 113.61387 * 220.02033 * 21 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.6834 -1.9788 -1.5582 6 7 2.2384 -2.3723 -2.6907 7 6 2.9437 -1.4945 -3.3339 8 7 3.5979 -1.7261 -4.5338 9 6 3.5198 -3.0443 -5.1680 10 1 2.6381 -3.6093 -4.8653 11 6 3.7363 -3.0095 -6.6901 12 6 5.2376 -3.1794 -6.4038 13 1 5.7662 -2.2356 -6.2704 14 6 5.9334 -4.1110 -7.3626 15 6 6.9791 -3.6486 -8.1391 16 6 7.6180 -4.5030 -9.0185 17 6 7.2111 -5.8196 -9.1218 18 6 6.1644 -6.2830 -8.3447 19 35 5.6066 -8.0842 -8.4861 20 6 5.5293 -5.4294 -7.4611 21 6 4.8294 -3.8492 -5.0811 22 16 2.9552 -0.0120 -2.4824 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5139 0.8900 25 1 3.5346 1.7701 0.0321 26 1 1.5615 2.4679 -1.2084 27 1 1.0779 -2.6318 -0.9471 28 1 4.1075 -1.0154 -4.9535 29 1 3.4843 -2.0516 -7.1452 30 1 3.2930 -3.8565 -7.2138 31 1 7.2976 -2.6198 -8.0584 32 1 8.4354 -4.1414 -9.6249 33 1 7.7106 -6.4870 -9.8084 34 1 4.7154 -5.7918 -6.8507 35 1 4.6846 -4.9263 -5.1635 36 1 5.4598 -3.5691 -4.2372 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14189270_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:54:59 Heat of formation + Delta-G solvation = 80.207671 kcal Electronic energy + Delta-G solvation = -21173.835470 eV Core-core repulsion = 17798.570827 eV Total energy + Delta-G solvation = -3375.264643 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.998 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.55156 -40.55713 -39.33705 -37.78545 -35.41507 -33.39128 -32.14467 -31.13707 -30.27077 -27.01308 -26.82724 -26.17172 -24.51194 -23.55855 -22.66226 -21.21207 -20.16149 -19.26002 -18.50683 -18.19797 -17.52187 -16.86775 -16.41573 -16.26050 -15.93906 -15.74602 -15.48061 -15.09564 -14.91542 -14.59600 -14.50597 -14.35931 -14.22506 -13.70376 -13.59456 -13.03814 -12.80803 -12.48689 -12.43698 -12.21849 -12.07099 -11.97753 -11.67142 -11.40016 -11.23700 -11.09398 -10.64072 -10.32288 -10.14533 -9.92036 -9.67698 -8.76207 -5.22458 -0.05879 0.03999 0.07050 0.18684 0.63654 0.64648 1.22056 1.56818 1.91856 2.02511 2.04659 2.48807 3.27781 3.42534 3.45997 3.53670 3.66052 3.70774 3.80803 3.93375 3.97396 4.06462 4.16906 4.31076 4.40787 4.45580 4.56929 4.59117 4.66052 4.75566 4.82459 4.84546 4.88770 4.95708 5.13609 5.20156 5.28138 5.44085 5.72564 5.83262 6.00533 6.58144 6.98668 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.017 4.017 3 Si 0.668 3.332 4 C -0.261 4.261 5 C 0.124 3.876 6 N -0.544 5.544 7 C 0.332 3.668 8 N -0.675 5.675 9 C 0.136 3.864 10 H 0.109 0.891 11 C -0.136 4.136 12 C -0.074 4.074 13 H 0.100 0.900 14 C -0.065 4.065 15 C -0.101 4.101 16 C -0.110 4.110 17 C -0.095 4.095 18 C -0.087 4.087 19 Br -0.049 7.049 20 C -0.089 4.089 21 C -0.145 4.145 22 S 0.070 5.930 23 H 0.383 0.617 24 H 0.082 0.918 25 H -0.242 1.242 26 H -0.239 1.239 27 H 0.179 0.821 28 H 0.414 0.586 29 H 0.078 0.922 30 H 0.101 0.899 31 H 0.128 0.872 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.134 0.866 35 H 0.097 0.903 36 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.195 3.624 1.908 4.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.131 4.131 3 Si 0.567 3.433 4 C -0.383 4.383 5 C -0.027 4.027 6 N -0.269 5.269 7 C -0.038 4.038 8 N -0.314 5.314 9 C 0.028 3.972 10 H 0.127 0.873 11 C -0.175 4.175 12 C -0.093 4.093 13 H 0.118 0.882 14 C -0.066 4.066 15 C -0.120 4.120 16 C -0.129 4.129 17 C -0.115 4.115 18 C -0.166 4.166 19 Br 0.037 6.963 20 C -0.108 4.108 21 C -0.184 4.184 22 S 0.318 5.682 23 H 0.231 0.769 24 H 0.100 0.900 25 H -0.166 1.166 26 H -0.163 1.163 27 H 0.196 0.804 28 H 0.251 0.749 29 H 0.097 0.903 30 H 0.119 0.881 31 H 0.146 0.854 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.152 0.848 35 H 0.115 0.885 36 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.941 3.506 0.409 4.028 hybrid contribution -0.022 -0.438 0.120 0.455 sum 1.919 3.067 0.529 3.657 Atomic orbital electron populations 1.86514 1.17137 1.81753 1.49765 1.23678 0.85479 1.09249 0.94658 0.95138 0.81766 0.78201 0.88154 1.24289 1.12789 0.97747 1.03465 1.21348 0.96727 0.92986 0.91627 1.66455 1.17095 1.33087 1.10309 1.23765 0.94871 0.93147 0.92064 1.43699 1.54362 1.13951 1.19364 1.21932 0.99411 0.83313 0.92508 0.87255 1.23477 0.94719 1.03837 0.95450 1.21623 0.95222 0.98016 0.94403 0.88221 1.19673 0.96146 0.93567 0.97224 1.21223 0.95192 1.00096 0.95445 1.21205 1.00003 0.93032 0.98667 1.21172 0.95493 0.96422 0.98422 1.21830 1.00716 0.91970 1.02133 1.96788 1.90187 1.11406 1.97910 1.20971 0.99706 0.92692 0.97451 1.23660 0.97410 1.00508 0.96860 1.84093 1.51508 1.14822 1.17774 0.76880 0.90032 1.16625 1.16264 0.80410 0.74853 0.90304 0.88060 0.85399 0.84944 0.84933 0.84850 0.88512 0.90532 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.09 12.84 -35.23 -0.45 -0.54 16 2 C -0.02 0.00 2.98 36.01 0.11 0.11 16 3 Si 0.67 -0.52 31.05 -169.99 -5.28 -5.79 16 4 C -0.26 -0.72 5.78 -36.02 -0.21 -0.93 16 5 C 0.12 0.41 11.22 -19.14 -0.21 0.20 16 6 N -0.54 -2.23 9.83 -15.21 -0.15 -2.38 16 7 C 0.33 0.85 8.09 -87.68 -0.71 0.14 16 8 N -0.68 0.08 5.42 -54.90 -0.30 -0.22 16 9 C 0.14 -0.09 4.45 -67.02 -0.30 -0.39 16 10 H 0.11 0.10 7.67 -51.93 -0.40 -0.29 16 11 C -0.14 0.27 7.29 -25.92 -0.19 0.09 16 12 C -0.07 0.14 3.86 -90.96 -0.35 -0.21 16 13 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 14 C -0.07 0.03 5.29 -104.63 -0.55 -0.52 16 15 C -0.10 0.08 9.71 -39.58 -0.38 -0.31 16 16 C -0.11 0.06 10.05 -39.59 -0.40 -0.34 16 17 C -0.10 -0.04 9.79 -39.56 -0.39 -0.43 16 18 C -0.09 -0.10 6.22 -39.52 -0.25 -0.34 16 19 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 20 C -0.09 -0.03 8.37 -39.56 -0.33 -0.36 16 21 C -0.15 0.16 7.26 -25.82 -0.19 -0.03 16 22 S 0.07 0.17 20.57 -107.50 -2.21 -2.05 16 23 H 0.38 -1.93 8.74 45.56 0.40 -1.53 16 24 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 25 H -0.24 -0.36 7.11 56.52 0.40 0.04 16 26 H -0.24 -0.59 7.11 56.52 0.40 -0.19 16 27 H 0.18 0.29 8.06 -52.49 -0.42 -0.13 16 28 H 0.41 -0.91 8.83 -40.82 -0.36 -1.27 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 30 H 0.10 -0.20 7.73 -51.93 -0.40 -0.60 16 31 H 0.13 -0.33 8.05 -52.49 -0.42 -0.75 16 32 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 33 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 34 H 0.13 -0.08 6.64 -52.49 -0.35 -0.43 16 35 H 0.10 -0.11 6.30 -51.93 -0.33 -0.44 16 36 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 338.45 15.07 5.10 5.10 Total: 0.00 -6.78 338.45 -13.94 -20.72 By element: Atomic # 1 Polarization: -5.15 SS G_CDS: -4.00 Total: -9.16 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -4.35 Total: -3.31 kcal Atomic # 7 Polarization: -2.15 SS G_CDS: -0.45 Total: -2.60 kcal Atomic # 8 Polarization: -0.09 SS G_CDS: -0.45 Total: -0.54 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.28 Total: -5.79 kcal Atomic # 16 Polarization: 0.17 SS G_CDS: -2.21 Total: -2.05 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -6.78 -13.94 -20.72 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14189270_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.925 kcal (2) G-P(sol) polarization free energy of solvation -6.781 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.936 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.717 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.208 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds