Wall clock time and date at job start Mon Mar 8 2021 05:44:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86299 * 109.47421 * 2 1 4 4 C 1.50704 * 109.47386 * 120.00373 * 2 1 3 5 5 C 1.38602 * 120.71938 * 64.99560 * 4 2 1 6 6 N 1.32279 * 119.19348 * 179.97438 * 5 4 2 7 7 C 1.32488 * 120.74408 * 359.97438 * 6 5 4 8 8 N 1.38407 * 119.21852 * 180.02562 * 7 6 5 9 9 C 1.46502 * 120.00004 * 179.97438 * 8 7 6 10 10 C 1.53002 * 109.47175 * 180.02562 * 9 8 7 11 11 C 1.52990 * 109.47110 * 179.97438 * 10 9 8 12 12 H 1.09000 * 112.90908 * 43.75454 * 11 10 9 13 13 C 1.53786 * 113.61464 * 175.00082 * 11 10 9 14 14 C 1.53781 * 87.17350 * 140.02626 * 13 11 10 15 15 H 1.08998 * 113.61196 * 219.97759 * 14 13 11 16 16 F 1.39903 * 113.61367 * 89.07581 * 14 13 11 17 17 C 1.53781 * 87.08070 * 334.52830 * 14 13 11 18 18 N 1.32501 * 121.56531 * 0.27807 * 7 6 5 19 19 C 1.32277 * 120.73547 * 359.44258 * 18 7 6 20 20 H 0.96702 * 114.00132 * 299.99708 * 1 2 3 21 21 H 1.09004 * 109.47367 * 240.00125 * 2 1 3 22 22 H 1.48502 * 110.00104 * 178.67619 * 3 2 1 23 23 H 1.48495 * 110.00012 * 300.00315 * 3 2 1 24 24 H 1.07993 * 120.40336 * 0.02562 * 5 4 2 25 25 H 0.97003 * 120.00022 * 0.02562 * 8 7 6 26 26 H 1.09002 * 109.47067 * 60.00301 * 9 8 7 27 27 H 1.09003 * 109.47399 * 300.00438 * 9 8 7 28 28 H 1.09007 * 109.46551 * 60.00395 * 10 9 8 29 29 H 1.08994 * 109.47111 * 300.00667 * 10 9 8 30 30 H 1.09002 * 113.61357 * 25.43543 * 13 11 10 31 31 H 1.09002 * 113.61608 * 254.61705 * 13 11 10 32 32 H 1.09005 * 113.61471 * 139.98321 * 17 14 13 33 33 H 1.09003 * 113.61469 * 270.88099 * 17 14 13 34 34 H 1.08003 * 120.39642 * 180.29392 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6925 -2.0634 1.4139 6 7 2.1478 -2.6568 2.5049 7 6 2.8251 -1.9729 3.4154 8 7 3.2874 -2.6257 4.5449 9 6 4.0387 -1.8862 5.5623 10 6 4.4301 -2.8348 6.6972 11 6 5.2152 -2.0628 7.7593 12 1 4.7750 -1.0928 7.9908 13 6 5.5527 -2.8990 9.0050 14 6 6.9291 -2.2132 8.9989 15 1 7.7525 -2.8847 9.2421 16 9 6.9645 -1.0210 9.7300 17 6 6.7305 -2.0039 7.4884 18 7 3.0661 -0.6779 3.2727 19 6 2.6435 -0.0255 2.2024 20 1 -0.3933 0.4417 0.7651 21 1 1.7923 -0.5138 -0.8900 22 1 3.5346 1.7702 0.0322 23 1 1.5615 2.4679 -1.2084 24 1 1.1422 -2.6264 0.6748 25 1 3.1147 -3.5729 4.6626 26 1 3.4190 -1.0816 5.9583 27 1 4.9388 -1.4649 5.1147 28 1 5.0500 -3.6391 6.3008 29 1 3.5302 -3.2565 7.1448 30 1 5.5980 -3.9709 8.8123 31 1 4.9451 -2.6508 9.8753 32 1 7.0733 -1.0319 7.1335 33 1 7.0979 -2.8310 6.8809 34 1 2.8471 1.0291 2.0894 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14412252_12175864.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:44:05 Heat of formation + Delta-G solvation = -2.009591 kcal Electronic energy + Delta-G solvation = -18017.508593 eV Core-core repulsion = 14867.369174 eV Total energy + Delta-G solvation = -3150.139419 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 254.117 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -48.61871 -42.05052 -39.66676 -38.21925 -36.92138 -34.68942 -33.30031 -31.13700 -27.14053 -26.88953 -26.01730 -25.14688 -23.14136 -22.82418 -20.64399 -19.39467 -18.68395 -18.06038 -17.29506 -16.90088 -16.73465 -16.35737 -16.10793 -16.03960 -15.74292 -15.48684 -15.35249 -14.70219 -14.55802 -14.07171 -13.82382 -13.68964 -13.26077 -13.15948 -12.75515 -12.22779 -12.11353 -11.97447 -11.84206 -11.75646 -11.38845 -11.24984 -11.14102 -10.58304 -10.00896 -9.10272 -5.11021 0.07761 0.17540 1.22555 1.56594 1.80854 1.92595 2.84759 3.10528 3.15501 3.21408 3.40997 3.46197 3.53595 3.62459 3.71711 3.73193 3.80144 3.98364 4.14773 4.20292 4.31570 4.45300 4.49861 4.51050 4.63815 4.67503 4.74286 4.78415 4.88552 4.96494 5.01005 5.22704 5.34696 5.76727 6.00908 6.40368 6.51541 7.30416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.046 4.046 3 Si 0.680 3.320 4 C -0.295 4.295 5 C 0.223 3.777 6 N -0.570 5.570 7 C 0.566 3.434 8 N -0.697 5.697 9 C 0.136 3.864 10 C -0.122 4.122 11 C -0.105 4.105 12 H 0.100 0.900 13 C -0.158 4.158 14 C 0.061 3.939 15 H 0.096 0.904 16 F -0.197 7.197 17 C -0.160 4.160 18 N -0.562 5.562 19 C 0.200 3.800 20 H 0.379 0.621 21 H 0.115 0.885 22 H -0.255 1.255 23 H -0.251 1.251 24 H 0.170 0.830 25 H 0.415 0.585 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.073 0.927 29 H 0.075 0.925 30 H 0.100 0.900 31 H 0.082 0.918 32 H 0.082 0.918 33 H 0.099 0.901 34 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.027 -0.357 1.515 1.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.158 4.158 3 Si 0.581 3.419 4 C -0.304 4.304 5 C 0.055 3.945 6 N -0.292 5.292 7 C 0.210 3.790 8 N -0.334 5.334 9 C 0.012 3.988 10 C -0.160 4.160 11 C -0.124 4.124 12 H 0.118 0.882 13 C -0.195 4.195 14 C 0.025 3.975 15 H 0.114 0.886 16 F -0.178 7.178 17 C -0.197 4.197 18 N -0.284 5.284 19 C 0.033 3.967 20 H 0.226 0.774 21 H 0.133 0.867 22 H -0.180 1.180 23 H -0.175 1.175 24 H 0.187 0.813 25 H 0.252 0.748 26 H 0.088 0.912 27 H 0.087 0.913 28 H 0.092 0.908 29 H 0.093 0.907 30 H 0.118 0.882 31 H 0.100 0.900 32 H 0.101 0.899 33 H 0.118 0.882 34 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 1.010 -0.419 1.571 1.914 hybrid contribution -0.253 -0.492 -0.838 1.004 sum 0.757 -0.910 0.732 1.392 Atomic orbital electron populations 1.86509 1.17147 1.81649 1.49269 1.24696 0.85098 1.09612 0.96400 0.94998 0.81110 0.77808 0.87955 1.21708 1.09145 0.97866 1.01669 1.22834 0.89152 0.90971 0.91547 1.67984 1.16637 1.40026 1.04521 1.19396 0.87137 0.85536 0.86965 1.44191 1.58710 1.12213 1.18238 1.21359 0.95835 0.94420 0.87145 1.21778 1.00930 0.98268 0.95035 1.22534 0.95010 0.99922 0.94919 0.88204 1.23615 0.96187 1.00604 0.99123 1.22374 0.99630 0.83575 0.91944 0.88574 1.92829 1.97614 1.48603 1.78720 1.23737 0.96408 1.04160 0.95434 1.67929 1.27046 1.08277 1.25176 1.22766 0.88146 0.99188 0.86628 0.77362 0.86732 1.17997 1.17503 0.81293 0.74798 0.91202 0.91263 0.90827 0.90668 0.88182 0.89968 0.89949 0.88223 0.81690 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.36 12.85 -35.23 -0.45 -0.09 16 2 C -0.05 0.05 2.83 36.01 0.10 0.15 16 3 Si 0.68 -1.26 29.88 -169.99 -5.08 -6.34 16 4 C -0.30 0.00 5.36 -104.35 -0.56 -0.56 16 5 C 0.22 0.26 10.99 -17.22 -0.19 0.07 16 6 N -0.57 -1.64 10.46 -13.93 -0.15 -1.78 16 7 C 0.57 1.48 8.43 -322.80 -2.72 -1.24 16 8 N -0.70 -0.21 5.70 -62.30 -0.36 -0.57 16 9 C 0.14 -0.15 5.64 -4.04 -0.02 -0.17 16 10 C -0.12 0.36 5.17 -26.73 -0.14 0.22 16 11 C -0.10 0.24 3.64 -89.67 -0.33 -0.09 16 12 H 0.10 -0.15 8.13 -51.93 -0.42 -0.57 16 13 C -0.16 0.36 7.53 -25.92 -0.20 0.16 16 14 C 0.06 -0.06 5.69 -25.92 -0.15 -0.21 16 15 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 16 F -0.20 -0.45 17.38 2.25 0.04 -0.42 16 17 C -0.16 0.33 7.54 -25.78 -0.19 0.14 16 18 N -0.56 -1.34 9.59 -13.93 -0.13 -1.47 16 19 C 0.20 0.07 9.92 -17.23 -0.17 -0.10 16 20 H 0.38 -1.62 8.70 45.56 0.40 -1.22 16 21 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 22 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 23 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 24 H 0.17 -0.11 8.06 -52.49 -0.42 -0.53 16 25 H 0.41 -0.40 8.59 -40.82 -0.35 -0.75 16 26 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.07 -0.25 7.85 -51.93 -0.41 -0.66 16 29 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 30 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 33 H 0.10 -0.32 7.90 -51.93 -0.41 -0.73 16 34 H 0.17 -0.39 5.07 -52.48 -0.27 -0.65 16 LS Contribution 292.02 15.07 4.40 4.40 Total: 0.00 -6.58 292.02 -10.74 -17.32 By element: Atomic # 1 Polarization: -4.97 SS G_CDS: -4.45 Total: -9.42 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -4.56 Total: -1.62 kcal Atomic # 7 Polarization: -3.19 SS G_CDS: -0.63 Total: -3.82 kcal Atomic # 8 Polarization: 0.36 SS G_CDS: -0.45 Total: -0.09 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.08 Total: -6.34 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -6.58 -10.74 -17.32 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14412252_12175864.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.308 kcal (2) G-P(sol) polarization free energy of solvation -6.577 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.731 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.317 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.010 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds