Wall clock time and date at job start Mon Mar 8 2021 05:44:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.33327 * 125.95124 * 2 1 4 4 C 1.50700 * 122.71312 * 359.97438 * 3 2 1 5 5 O 1.42898 * 109.47297 * 113.53699 * 4 3 2 6 6 Si 1.86299 * 109.47276 * 233.54062 * 4 3 2 7 7 N 1.32122 * 114.58067 * 180.24387 * 3 2 1 8 8 C 1.29693 * 116.86463 * 359.48762 * 7 3 2 9 9 N 1.38607 * 124.95213 * 180.22692 * 8 7 3 10 10 C 1.46497 * 120.00002 * 180.27707 * 9 8 7 11 11 C 1.53007 * 109.46838 * 180.02562 * 10 9 8 12 12 C 1.52997 * 109.46820 * 180.02562 * 11 10 9 13 13 H 1.08995 * 112.85229 * 316.19394 * 12 11 10 14 14 C 1.53790 * 113.61555 * 87.49973 * 12 11 10 15 15 C 1.53788 * 87.07849 * 139.97771 * 14 12 11 16 16 H 1.08996 * 113.61227 * 220.01799 * 15 14 12 17 17 F 1.39899 * 113.61139 * 89.12018 * 15 14 12 18 18 C 1.53775 * 87.08342 * 334.56740 * 15 14 12 19 19 S 1.70967 * 110.09738 * 0.48774 * 8 7 3 20 20 H 1.09004 * 109.46809 * 84.87305 * 1 2 3 21 21 H 1.09000 * 109.47346 * 204.86932 * 1 2 3 22 22 H 1.08997 * 109.47429 * 324.87473 * 1 2 3 23 23 H 1.08998 * 109.46586 * 353.53752 * 4 3 2 24 24 H 0.96698 * 113.99975 * 59.99980 * 5 4 3 25 25 H 1.48499 * 109.99967 * 58.67442 * 6 4 3 26 26 H 1.48494 * 110.00080 * 179.97438 * 6 4 3 27 27 H 0.97002 * 119.99544 * 0.27562 * 9 8 7 28 28 H 1.09000 * 109.47251 * 299.99479 * 10 9 8 29 29 H 1.09000 * 109.47391 * 60.00274 * 10 9 8 30 30 H 1.09000 * 109.46653 * 299.99697 * 11 10 9 31 31 H 1.08987 * 109.47253 * 59.99712 * 11 10 9 32 32 H 1.08998 * 113.61052 * 254.52778 * 14 12 11 33 33 H 1.08997 * 113.61394 * 25.43185 * 14 12 11 34 34 H 1.08995 * 113.61581 * 270.88424 * 18 15 14 35 35 H 1.09004 * 113.69163 * 139.99047 * 18 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 -0.0006 5 8 2.0688 3.1228 1.2345 6 14 2.4882 3.4409 -1.4132 7 7 3.5850 0.8188 -0.0051 8 6 3.9315 -0.4310 0.0009 9 7 5.2384 -0.8926 0.0015 10 6 5.5065 -2.3329 0.0025 11 6 7.0180 -2.5702 0.0036 12 6 7.2980 -4.0744 0.0040 13 1 6.6623 -4.6231 0.6989 14 6 7.3513 -4.6915 -1.4036 15 6 8.5358 -5.5351 -0.9033 16 1 9.3355 -5.6428 -1.6360 17 9 8.1539 -6.7533 -0.3310 18 6 8.7907 -4.4231 0.1278 19 16 2.5413 -1.4260 0.0007 20 1 -0.3633 0.0918 -1.0236 21 1 -0.3634 -0.9324 0.4322 22 1 -0.3634 0.8405 0.5913 23 1 0.6581 2.4498 -0.1166 24 1 3.0186 3.1875 1.4043 25 1 2.1818 2.7681 -2.7011 26 1 1.9551 4.8268 -1.4251 27 1 5.9755 -0.2620 0.0012 28 1 5.0677 -2.7835 0.8927 29 1 5.0681 -2.7847 -0.8873 30 1 7.4572 -2.1195 -0.8864 31 1 7.4561 -2.1185 0.8935 32 1 6.4702 -5.2818 -1.6552 33 1 7.6212 -3.9788 -2.1829 34 1 9.4540 -3.6371 -0.2327 35 1 9.0718 -4.7954 1.1130 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14412252_15704122.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:44:11 Heat of formation + Delta-G solvation = -17.361107 kcal Electronic energy + Delta-G solvation = -18403.083554 eV Core-core repulsion = 15251.318981 eV Total energy + Delta-G solvation = -3151.764572 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.094 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.67602 -40.97527 -39.78470 -37.87551 -36.82302 -33.65193 -31.64138 -28.90051 -27.08545 -26.25553 -25.45085 -24.13695 -23.21962 -20.75447 -20.41286 -19.07341 -17.84135 -17.67625 -17.14351 -16.97192 -16.72557 -16.42204 -15.88335 -15.84609 -15.45202 -15.23964 -14.88247 -14.12750 -14.06194 -14.01182 -13.89227 -13.75429 -13.52508 -13.33414 -12.93748 -12.72979 -12.31833 -12.20032 -12.01673 -11.76432 -11.40853 -11.24015 -11.05388 -10.61301 -10.37106 -9.95545 -8.63877 -4.81607 0.02909 0.19474 0.79531 1.36403 1.76657 1.86805 1.94502 2.10670 3.06654 3.11040 3.36449 3.42402 3.49881 3.60858 3.69931 3.85366 3.93377 4.05893 4.15441 4.21027 4.30838 4.42761 4.44862 4.46254 4.56858 4.62341 4.65208 4.78952 4.83008 4.88132 4.92260 4.93597 5.20795 5.26854 5.54183 6.26875 6.63491 6.94305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C -0.249 4.249 3 C 0.075 3.925 4 C -0.033 4.033 5 O -0.536 6.536 6 Si 0.709 3.291 7 N -0.542 5.542 8 C 0.319 3.681 9 N -0.694 5.694 10 C 0.121 3.879 11 C -0.117 4.117 12 C -0.108 4.108 13 H 0.100 0.900 14 C -0.161 4.161 15 C 0.061 3.939 16 H 0.097 0.903 17 F -0.197 7.197 18 C -0.157 4.157 19 S 0.104 5.896 20 H 0.072 0.928 21 H 0.069 0.931 22 H 0.079 0.921 23 H 0.118 0.882 24 H 0.382 0.618 25 H -0.261 1.261 26 H -0.252 1.252 27 H 0.413 0.587 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.077 0.923 31 H 0.078 0.922 32 H 0.082 0.918 33 H 0.101 0.899 34 H 0.101 0.899 35 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.519 -1.422 -1.114 3.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.372 4.372 3 C -0.056 4.056 4 C -0.146 4.146 5 O -0.342 6.342 6 Si 0.610 3.390 7 N -0.269 5.269 8 C -0.053 4.053 9 N -0.335 5.335 10 C -0.004 4.004 11 C -0.155 4.155 12 C -0.126 4.126 13 H 0.118 0.882 14 C -0.198 4.198 15 C 0.025 3.975 16 H 0.115 0.885 17 F -0.177 7.177 18 C -0.195 4.195 19 S 0.353 5.647 20 H 0.091 0.909 21 H 0.088 0.912 22 H 0.098 0.902 23 H 0.136 0.864 24 H 0.230 0.770 25 H -0.186 1.186 26 H -0.177 1.177 27 H 0.251 0.749 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.096 0.904 31 H 0.097 0.903 32 H 0.101 0.899 33 H 0.119 0.881 34 H 0.119 0.881 35 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 3.002 -1.869 -1.806 3.971 hybrid contribution -0.351 0.409 0.323 0.628 sum 2.651 -1.460 -1.483 3.371 Atomic orbital electron populations 1.20189 0.86992 1.03338 1.02655 1.25085 1.01097 0.93226 1.17825 1.20068 0.86963 0.97113 1.01461 1.24728 1.02955 0.89814 0.97108 1.86466 1.29926 1.79529 1.38245 0.93806 0.91342 0.78545 0.75303 1.65965 1.16986 1.16551 1.27355 1.23267 0.91808 0.91593 0.98584 1.43928 1.01762 1.07281 1.80552 1.21584 0.97398 0.79096 1.02277 1.21708 0.93917 0.96180 1.03703 1.22520 0.97263 0.94999 0.97859 0.88223 1.23707 0.99084 0.99528 0.97495 1.22373 0.98511 0.80289 0.96328 0.88493 1.92832 1.92651 1.45938 1.86324 1.23610 0.96926 0.98321 1.00600 1.83972 0.96591 1.10246 1.73891 0.90935 0.91168 0.90234 0.86422 0.76977 1.18582 1.17662 0.74866 0.91323 0.91269 0.90408 0.90309 0.89947 0.88085 0.88075 0.89890 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.01 9.71 36.00 0.35 0.33 16 2 C -0.25 -0.56 6.57 -36.03 -0.24 -0.80 16 3 C 0.07 0.20 5.20 -84.18 -0.44 -0.24 16 4 C -0.03 -0.06 2.84 36.01 0.10 0.04 16 5 O -0.54 -1.26 12.88 -35.23 -0.45 -1.71 16 6 Si 0.71 0.85 32.61 -169.99 -5.54 -4.69 16 7 N -0.54 -1.37 9.76 -11.36 -0.11 -1.48 16 8 C 0.32 0.46 8.24 -87.68 -0.72 -0.27 16 9 N -0.69 0.89 5.71 -62.30 -0.36 0.54 16 10 C 0.12 -0.35 5.52 -4.04 -0.02 -0.37 16 11 C -0.12 0.50 5.17 -26.73 -0.14 0.36 16 12 C -0.11 0.36 3.63 -89.80 -0.33 0.04 16 13 H 0.10 -0.26 8.13 -51.93 -0.42 -0.69 16 14 C -0.16 0.50 7.53 -25.91 -0.20 0.30 16 15 C 0.06 -0.11 5.69 -25.92 -0.15 -0.26 16 16 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 17 F -0.20 -0.33 17.38 2.25 0.04 -0.29 16 18 C -0.16 0.49 7.54 -25.92 -0.20 0.29 16 19 S 0.10 0.12 22.32 -107.50 -2.40 -2.28 16 20 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 21 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 22 H 0.08 -0.01 7.17 -51.93 -0.37 -0.38 16 23 H 0.12 0.14 6.33 -51.93 -0.33 -0.19 16 24 H 0.38 -0.18 8.70 45.56 0.40 0.22 16 25 H -0.26 -0.99 7.11 56.52 0.40 -0.59 16 26 H -0.25 -0.83 7.11 56.52 0.40 -0.43 16 27 H 0.41 -0.99 8.60 -40.82 -0.35 -1.35 16 28 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.08 -0.37 7.84 -51.93 -0.41 -0.78 16 31 H 0.08 -0.34 8.14 -51.94 -0.42 -0.76 16 32 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.10 -0.44 7.89 -51.93 -0.41 -0.85 16 34 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 35 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 LS Contribution 310.40 15.07 4.68 4.68 Total: 0.00 -5.56 310.40 -11.01 -16.57 By element: Atomic # 1 Polarization: -5.88 SS G_CDS: -4.90 Total: -10.78 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -1.97 Total: -0.56 kcal Atomic # 7 Polarization: -0.47 SS G_CDS: -0.47 Total: -0.94 kcal Atomic # 8 Polarization: -1.26 SS G_CDS: -0.45 Total: -1.71 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: 0.85 SS G_CDS: -5.54 Total: -4.69 kcal Atomic # 16 Polarization: 0.12 SS G_CDS: -2.40 Total: -2.28 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -5.56 -11.01 -16.57 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14412252_15704122.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.792 kcal (2) G-P(sol) polarization free energy of solvation -5.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.011 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.569 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.361 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds