Wall clock time and date at job start Mon Mar 8 2021 05:44:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86293 * 109.47296 * 2 1 4 4 C 1.50700 * 109.47290 * 239.99658 * 2 1 3 5 5 C 1.37980 * 120.32692 * 119.99845 * 4 2 1 6 6 N 1.32009 * 120.90323 * 179.97438 * 5 4 2 7 7 C 1.32340 * 121.64386 * 0.02562 * 6 5 4 8 8 N 1.39145 * 119.71542 * 179.97438 * 7 6 5 9 9 C 1.46498 * 120.00239 * 359.71915 * 8 7 6 10 10 C 1.53001 * 109.47427 * 180.02562 * 9 8 7 11 11 C 1.52994 * 109.47367 * 180.02562 * 10 9 8 12 12 H 1.09007 * 112.85320 * 43.80461 * 11 10 9 13 13 C 1.53782 * 113.61709 * 175.00108 * 11 10 9 14 14 C 1.53776 * 87.08231 * 139.98041 * 13 11 10 15 15 H 1.09002 * 113.62024 * 219.93627 * 14 13 11 16 16 F 1.39897 * 113.61641 * 89.11566 * 14 13 11 17 17 C 1.53780 * 87.08260 * 334.56985 * 14 13 11 18 18 C 1.39344 * 120.56448 * 0.25402 * 7 6 5 19 19 F 1.35104 * 120.46930 * 179.72542 * 18 7 6 20 20 C 1.38441 * 119.05394 * 359.49100 * 18 7 6 21 21 H 0.96698 * 114.00133 * 300.00041 * 1 2 3 22 22 H 1.09002 * 109.46878 * 119.99972 * 2 1 3 23 23 H 1.48498 * 110.00046 * 299.99625 * 3 2 1 24 24 H 1.48495 * 110.00016 * 61.31633 * 3 2 1 25 25 H 1.08001 * 119.54815 * 0.02562 * 5 4 2 26 26 H 0.97005 * 119.99811 * 179.97438 * 8 7 6 27 27 H 1.08998 * 109.47521 * 300.00504 * 9 8 7 28 28 H 1.09001 * 109.46777 * 60.00449 * 9 8 7 29 29 H 1.08998 * 109.47065 * 300.00641 * 10 9 8 30 30 H 1.09001 * 109.46892 * 60.00377 * 10 9 8 31 31 H 1.08993 * 113.61485 * 254.52829 * 13 11 10 32 32 H 1.08997 * 113.60908 * 25.43206 * 13 11 10 33 33 H 1.09003 * 113.61287 * 270.88371 * 17 14 13 34 34 H 1.09005 * 113.61589 * 139.98312 * 17 14 13 35 35 H 1.08005 * 120.75486 * 180.24348 * 20 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7250 -0.0464 -2.1431 6 7 3.1718 -0.6579 -3.2244 7 6 2.8792 -1.9235 -3.4773 8 7 3.3713 -2.5282 -4.6298 9 6 4.2043 -1.7624 -5.5604 10 6 4.6092 -2.6548 -6.7353 11 6 5.4796 -1.8553 -7.7068 12 1 6.2319 -1.2498 -7.2012 13 6 6.0423 -2.6961 -8.8649 14 6 5.7574 -1.4899 -9.7752 15 1 5.3628 -1.7646 -10.7535 16 9 6.8199 -0.5832 -9.8531 17 6 4.6730 -1.0826 -8.7637 18 6 2.0779 -2.6540 -2.6021 19 9 1.7760 -3.9444 -2.8649 20 6 1.5997 -2.0402 -1.4571 21 1 -0.3933 0.4417 0.7650 22 1 1.7923 -0.5138 0.8900 23 1 1.5616 2.4678 -1.2085 24 1 1.5879 2.4585 1.2242 25 1 2.9850 0.9874 -1.9701 26 1 3.1598 -3.4558 -4.8190 27 1 3.6411 -0.9064 -5.9320 28 1 5.0984 -1.4128 -5.0442 29 1 5.1722 -3.5111 -6.3640 30 1 3.7149 -3.0041 -7.2513 31 1 7.1031 -2.9252 -8.7630 32 1 5.4396 -3.5731 -9.1007 33 1 3.6958 -1.5185 -8.9719 34 1 4.6282 -0.0090 -8.5801 35 1 0.9797 -2.5817 -0.7579 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14412252_17656566.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:44:13 Heat of formation + Delta-G solvation = -61.958146 kcal Electronic energy + Delta-G solvation = -20129.610685 eV Core-core repulsion = 16572.843637 eV Total energy + Delta-G solvation = -3556.767048 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.112 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -49.81941 -48.60022 -41.31801 -39.63538 -38.18710 -36.87684 -33.50090 -32.70216 -30.66744 -27.05845 -26.80609 -25.78497 -24.38802 -22.78063 -22.68186 -20.60664 -19.25166 -18.69155 -18.23795 -17.95856 -17.26006 -16.94896 -16.79376 -16.42153 -16.30452 -15.81572 -15.75532 -15.57464 -15.08421 -14.93445 -14.39313 -14.16042 -14.00496 -13.93422 -13.69152 -13.59988 -13.18435 -12.78339 -12.51678 -12.10433 -12.03150 -11.93390 -11.35883 -11.21394 -11.12180 -10.69396 -10.65068 -10.44949 -8.70982 -5.02047 -0.00996 0.18678 1.21149 1.54479 1.91032 1.99502 2.57815 3.09996 3.15646 3.18978 3.23784 3.36933 3.50144 3.59524 3.64724 3.77351 3.90052 3.98771 4.12574 4.19704 4.27271 4.34652 4.48979 4.53390 4.55451 4.67564 4.71188 4.74523 4.81639 4.91782 5.01014 5.03318 5.05617 5.37300 5.40881 5.97392 6.20295 6.38131 7.00543 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.063 4.063 3 Si 0.679 3.321 4 C -0.163 4.163 5 C 0.151 3.849 6 N -0.511 5.511 7 C 0.389 3.611 8 N -0.719 5.719 9 C 0.133 3.867 10 C -0.123 4.123 11 C -0.105 4.105 12 H 0.100 0.900 13 C -0.158 4.158 14 C 0.061 3.939 15 H 0.096 0.904 16 F -0.197 7.197 17 C -0.159 4.159 18 C -0.021 4.021 19 F -0.134 7.134 20 C -0.037 4.037 21 H 0.381 0.619 22 H 0.079 0.921 23 H -0.251 1.251 24 H -0.258 1.258 25 H 0.164 0.836 26 H 0.412 0.588 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.073 0.927 30 H 0.072 0.928 31 H 0.082 0.918 32 H 0.099 0.901 33 H 0.099 0.901 34 H 0.082 0.918 35 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.107 -0.794 1.259 1.855 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.173 4.173 3 Si 0.579 3.421 4 C -0.168 4.168 5 C -0.006 4.006 6 N -0.228 5.228 7 C 0.151 3.849 8 N -0.352 5.352 9 C 0.009 3.991 10 C -0.161 4.161 11 C -0.124 4.124 12 H 0.118 0.882 13 C -0.196 4.196 14 C 0.025 3.975 15 H 0.114 0.886 16 F -0.178 7.178 17 C -0.197 4.197 18 C -0.047 4.047 19 F -0.113 7.113 20 C -0.063 4.063 21 H 0.229 0.771 22 H 0.096 0.904 23 H -0.175 1.175 24 H -0.182 1.182 25 H 0.180 0.820 26 H 0.249 0.751 27 H 0.086 0.914 28 H 0.087 0.913 29 H 0.092 0.908 30 H 0.091 0.909 31 H 0.100 0.900 32 H 0.118 0.882 33 H 0.118 0.882 34 H 0.101 0.899 35 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.655 0.275 -0.048 1.679 hybrid contribution -1.778 -1.189 1.039 2.377 sum -0.122 -0.914 0.991 1.353 Atomic orbital electron populations 1.86588 1.17827 1.80172 1.49896 1.24561 0.84431 1.10794 0.97504 0.95192 0.91588 0.74443 0.80854 1.19823 1.03799 0.94254 0.98959 1.22269 0.91978 0.98966 0.87410 1.67331 1.26644 1.07370 1.21447 1.18424 0.90160 0.89106 0.87240 1.44573 1.55240 1.14645 1.20779 1.21335 0.94581 0.94328 0.88861 1.21784 1.00025 0.98622 0.95651 1.22490 0.98135 0.97440 0.94301 0.88213 1.23616 1.03108 0.97283 0.95548 1.22381 0.85983 0.89247 0.99909 0.88605 1.92827 1.58402 1.68893 1.97654 1.23686 0.98209 1.02286 0.95530 1.17972 1.06879 0.81046 0.98850 1.91486 1.92119 1.33762 1.93928 1.21245 0.95937 0.94373 0.94737 0.77063 0.90351 1.17546 1.18245 0.81978 0.75116 0.91368 0.91260 0.90797 0.90947 0.89977 0.88213 0.88240 0.89942 0.83422 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.28 12.75 -35.23 -0.45 -0.73 16 2 C -0.06 0.05 2.83 36.01 0.10 0.15 16 3 Si 0.68 -1.13 29.82 -169.99 -5.07 -6.19 16 4 C -0.16 -0.17 5.43 -104.47 -0.57 -0.73 16 5 C 0.15 0.17 9.84 -17.57 -0.17 0.00 16 6 N -0.51 -1.32 9.57 -12.36 -0.12 -1.44 16 7 C 0.39 0.91 7.49 -154.85 -1.16 -0.25 16 8 N -0.72 -0.25 5.71 -60.34 -0.34 -0.59 16 9 C 0.13 -0.10 5.69 -4.04 -0.02 -0.12 16 10 C -0.12 0.31 5.16 -26.73 -0.14 0.17 16 11 C -0.10 0.20 3.63 -89.81 -0.33 -0.13 16 12 H 0.10 -0.11 8.13 -51.93 -0.42 -0.54 16 13 C -0.16 0.31 7.54 -25.92 -0.20 0.11 16 14 C 0.06 -0.05 5.69 -25.92 -0.15 -0.19 16 15 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 16 F -0.20 -0.50 17.38 2.25 0.04 -0.46 16 17 C -0.16 0.28 7.53 -25.92 -0.20 0.08 16 18 C -0.02 -0.05 7.35 -39.10 -0.29 -0.34 16 19 F -0.13 -0.36 16.65 2.25 0.04 -0.32 16 20 C -0.04 -0.06 9.75 -39.26 -0.38 -0.44 16 21 H 0.38 -1.32 8.74 45.56 0.40 -0.92 16 22 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 23 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 24 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 25 H 0.16 -0.20 4.88 -52.49 -0.26 -0.46 16 26 H 0.41 -0.39 7.94 -40.82 -0.32 -0.71 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 29 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 30 H 0.07 -0.21 7.84 -51.93 -0.41 -0.62 16 31 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 32 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 33 H 0.10 -0.28 7.90 -51.93 -0.41 -0.69 16 34 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 35 H 0.15 0.08 8.06 -52.48 -0.42 -0.35 16 LS Contribution 302.41 15.07 4.56 4.56 Total: 0.00 -6.05 302.41 -9.25 -15.30 By element: Atomic # 1 Polarization: -4.02 SS G_CDS: -4.41 Total: -8.43 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -3.49 Total: -1.69 kcal Atomic # 7 Polarization: -1.57 SS G_CDS: -0.46 Total: -2.03 kcal Atomic # 8 Polarization: -0.28 SS G_CDS: -0.45 Total: -0.73 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 0.08 Total: -0.79 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.07 Total: -6.19 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -6.05 -9.25 -15.30 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14412252_17656566.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.654 kcal (2) G-P(sol) polarization free energy of solvation -6.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.706 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.304 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.958 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds