Wall clock time and date at job start Mon Mar 8 2021 05:44:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86293 * 109.47296 * 2 1 4 4 C 1.50700 * 109.47290 * 239.99658 * 2 1 3 5 5 C 1.37980 * 120.32692 * 119.99845 * 4 2 1 6 6 N 1.32009 * 120.90323 * 179.97438 * 5 4 2 7 7 C 1.32340 * 121.64386 * 0.02562 * 6 5 4 8 8 N 1.39145 * 119.71542 * 179.97438 * 7 6 5 9 9 C 1.46498 * 120.00239 * 359.71915 * 8 7 6 10 10 C 1.53001 * 109.47427 * 180.02562 * 9 8 7 11 11 C 1.52994 * 109.47367 * 180.02562 * 10 9 8 12 12 H 1.09007 * 112.85320 * 43.80461 * 11 10 9 13 13 C 1.53782 * 113.61709 * 175.00108 * 11 10 9 14 14 C 1.53776 * 87.08231 * 139.98041 * 13 11 10 15 15 H 1.09002 * 113.62024 * 219.93627 * 14 13 11 16 16 F 1.39897 * 113.61641 * 89.11566 * 14 13 11 17 17 C 1.53780 * 87.08260 * 334.56985 * 14 13 11 18 18 C 1.39344 * 120.56448 * 0.25402 * 7 6 5 19 19 F 1.35104 * 120.46930 * 179.72542 * 18 7 6 20 20 C 1.38441 * 119.05394 * 359.49100 * 18 7 6 21 21 H 0.96698 * 114.00133 * 300.00041 * 1 2 3 22 22 H 1.09002 * 109.46878 * 119.99972 * 2 1 3 23 23 H 1.48498 * 110.00046 * 299.99625 * 3 2 1 24 24 H 1.48495 * 110.00016 * 61.31633 * 3 2 1 25 25 H 1.08001 * 119.54815 * 0.02562 * 5 4 2 26 26 H 0.97005 * 119.99811 * 179.97438 * 8 7 6 27 27 H 1.08998 * 109.47521 * 300.00504 * 9 8 7 28 28 H 1.09001 * 109.46777 * 60.00449 * 9 8 7 29 29 H 1.08998 * 109.47065 * 300.00641 * 10 9 8 30 30 H 1.09001 * 109.46892 * 60.00377 * 10 9 8 31 31 H 1.08993 * 113.61485 * 254.52829 * 13 11 10 32 32 H 1.08997 * 113.60908 * 25.43206 * 13 11 10 33 33 H 1.09003 * 113.61287 * 270.88371 * 17 14 13 34 34 H 1.09005 * 113.61589 * 139.98312 * 17 14 13 35 35 H 1.08005 * 120.75486 * 180.24348 * 20 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7250 -0.0464 -2.1431 6 7 3.1718 -0.6579 -3.2244 7 6 2.8792 -1.9235 -3.4773 8 7 3.3713 -2.5282 -4.6298 9 6 4.2043 -1.7624 -5.5604 10 6 4.6092 -2.6548 -6.7353 11 6 5.4796 -1.8553 -7.7068 12 1 6.2319 -1.2498 -7.2012 13 6 6.0423 -2.6961 -8.8649 14 6 5.7574 -1.4899 -9.7752 15 1 5.3628 -1.7646 -10.7535 16 9 6.8199 -0.5832 -9.8531 17 6 4.6730 -1.0826 -8.7637 18 6 2.0779 -2.6540 -2.6021 19 9 1.7760 -3.9444 -2.8649 20 6 1.5997 -2.0402 -1.4571 21 1 -0.3933 0.4417 0.7650 22 1 1.7923 -0.5138 0.8900 23 1 1.5616 2.4678 -1.2085 24 1 1.5879 2.4585 1.2242 25 1 2.9850 0.9874 -1.9701 26 1 3.1598 -3.4558 -4.8190 27 1 3.6411 -0.9064 -5.9320 28 1 5.0984 -1.4128 -5.0442 29 1 5.1722 -3.5111 -6.3640 30 1 3.7149 -3.0041 -7.2513 31 1 7.1031 -2.9252 -8.7630 32 1 5.4396 -3.5731 -9.1007 33 1 3.6958 -1.5185 -8.9719 34 1 4.6282 -0.0090 -8.5801 35 1 0.9797 -2.5817 -0.7579 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_14412252_17656566.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:44:12 Heat of formation + Delta-G solvation = -57.933975 kcal Electronic energy + Delta-G solvation = -20129.436184 eV Core-core repulsion = 16572.843637 eV Total energy + Delta-G solvation = -3556.592547 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.112 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -49.97147 -48.66617 -41.39005 -39.52686 -38.16475 -36.87399 -33.54202 -32.73067 -30.65232 -26.97286 -26.72723 -25.79882 -24.40581 -22.78809 -22.65772 -20.49968 -19.30405 -18.68228 -18.27760 -18.05142 -17.21569 -17.03931 -16.73105 -16.43134 -16.29173 -15.83410 -15.75405 -15.61367 -15.09802 -14.95821 -14.41576 -14.20722 -14.08153 -13.92799 -13.66573 -13.49063 -13.10195 -12.72233 -12.47833 -12.10544 -11.93375 -11.85188 -11.33240 -11.14848 -11.02236 -10.76198 -10.73778 -10.42432 -8.77002 -4.90314 -0.10717 0.09697 1.30436 1.62526 1.97674 1.98126 2.49866 3.00904 3.20401 3.29494 3.34819 3.40453 3.62746 3.64162 3.72081 3.84897 3.89526 4.06696 4.14898 4.29720 4.37537 4.43343 4.52153 4.60951 4.70999 4.73165 4.77162 4.83590 4.93210 4.98148 5.03567 5.12411 5.18840 5.36675 5.50286 5.94214 6.17805 6.61458 6.94812 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.070 4.070 3 Si 0.759 3.241 4 C -0.168 4.168 5 C 0.145 3.855 6 N -0.528 5.528 7 C 0.378 3.622 8 N -0.715 5.715 9 C 0.136 3.864 10 C -0.111 4.111 11 C -0.104 4.104 12 H 0.088 0.912 13 C -0.151 4.151 14 C 0.046 3.954 15 H 0.111 0.889 16 F -0.220 7.220 17 C -0.156 4.156 18 C -0.037 4.037 19 F -0.139 7.139 20 C -0.041 4.041 21 H 0.397 0.603 22 H 0.102 0.898 23 H -0.296 1.296 24 H -0.281 1.281 25 H 0.181 0.819 26 H 0.417 0.583 27 H 0.058 0.942 28 H 0.060 0.940 29 H 0.080 0.920 30 H 0.083 0.917 31 H 0.075 0.925 32 H 0.118 0.882 33 H 0.115 0.885 34 H 0.071 0.929 35 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.925 -1.282 1.600 2.250 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.179 4.179 3 Si 0.664 3.336 4 C -0.173 4.173 5 C -0.011 4.011 6 N -0.246 5.246 7 C 0.139 3.861 8 N -0.349 5.349 9 C 0.013 3.987 10 C -0.149 4.149 11 C -0.123 4.123 12 H 0.106 0.894 13 C -0.188 4.188 14 C 0.010 3.990 15 H 0.129 0.871 16 F -0.201 7.201 17 C -0.194 4.194 18 C -0.063 4.063 19 F -0.118 7.118 20 C -0.067 4.067 21 H 0.248 0.752 22 H 0.120 0.880 23 H -0.223 1.223 24 H -0.208 1.208 25 H 0.197 0.803 26 H 0.255 0.745 27 H 0.077 0.923 28 H 0.079 0.921 29 H 0.098 0.902 30 H 0.101 0.899 31 H 0.094 0.906 32 H 0.137 0.863 33 H 0.133 0.867 34 H 0.090 0.910 35 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 1.481 -0.237 0.304 1.530 hybrid contribution -1.761 -0.992 0.938 2.228 sum -0.280 -1.229 1.242 1.770 Atomic orbital electron populations 1.86539 1.18502 1.80717 1.51244 1.24758 0.84050 1.11558 0.97541 0.94270 0.90291 0.72060 0.77011 1.20043 1.03579 0.94148 0.99565 1.22622 0.91731 0.99702 0.87075 1.67363 1.27344 1.07650 1.22224 1.18607 0.90397 0.89240 0.87836 1.44642 1.54950 1.14938 1.20343 1.21309 0.93839 0.94419 0.89140 1.21692 1.00328 0.98166 0.94710 1.22444 0.97982 0.97469 0.94442 0.89407 1.23619 1.03057 0.97377 0.94774 1.22697 0.85695 0.89442 1.01194 0.87127 1.92776 1.59636 1.69874 1.97793 1.23703 0.98688 1.01795 0.95176 1.18100 1.07679 0.81038 0.99487 1.91465 1.92242 1.34041 1.94029 1.21442 0.95852 0.94785 0.94670 0.75215 0.88046 1.22310 1.20783 0.80282 0.74474 0.92331 0.92144 0.90177 0.89866 0.90634 0.86345 0.86673 0.91008 0.82575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.30 12.75 -148.98 -1.90 -2.20 16 2 C -0.07 0.16 2.83 71.24 0.20 0.36 16 3 Si 0.76 -2.78 29.82 68.60 2.05 -0.74 16 4 C -0.17 -0.33 5.43 -19.77 -0.11 -0.44 16 5 C 0.15 0.37 9.84 84.61 0.83 1.20 16 6 N -0.53 -3.10 9.57 -193.03 -1.85 -4.95 16 7 C 0.38 2.03 7.49 133.08 1.00 3.03 16 8 N -0.72 -0.81 5.71 -344.81 -1.97 -2.77 16 9 C 0.14 -0.13 5.69 86.38 0.49 0.36 16 10 C -0.11 0.61 5.16 30.59 0.16 0.76 16 11 C -0.10 0.38 3.63 -10.27 -0.04 0.35 16 12 H 0.09 -0.11 8.13 -2.38 -0.02 -0.13 16 13 C -0.15 0.65 7.54 31.12 0.23 0.89 16 14 C 0.05 -0.07 5.69 31.12 0.18 0.11 16 15 H 0.11 -0.53 8.14 -2.39 -0.02 -0.55 16 16 F -0.22 -1.35 17.38 44.97 0.78 -0.57 16 17 C -0.16 0.53 7.53 31.12 0.23 0.77 16 18 C -0.04 -0.20 7.35 22.58 0.17 -0.03 16 19 F -0.14 -0.82 16.65 44.97 0.75 -0.07 16 20 C -0.04 -0.15 9.75 22.48 0.22 0.07 16 21 H 0.40 -3.00 8.74 -74.06 -0.65 -3.65 16 22 H 0.10 -0.68 7.96 -2.39 -0.02 -0.70 16 23 H -0.30 -1.12 7.11 99.48 0.71 -0.41 16 24 H -0.28 -0.08 7.11 99.48 0.71 0.63 16 25 H 0.18 -0.42 4.88 -2.91 -0.01 -0.44 16 26 H 0.42 -0.71 7.94 -92.70 -0.74 -1.45 16 27 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 28 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 29 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 30 H 0.08 -0.59 7.84 -2.39 -0.02 -0.61 16 31 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.12 -0.95 8.10 -2.39 -0.02 -0.97 16 33 H 0.11 -0.76 7.90 -2.39 -0.02 -0.78 16 34 H 0.07 -0.08 8.14 -2.38 -0.02 -0.10 16 35 H 0.16 0.16 8.06 -2.91 -0.02 0.14 16 Total: 0.00 -14.77 302.41 1.21 -13.56 By element: Atomic # 1 Polarization: -9.46 SS G_CDS: -0.22 Total: -9.68 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: 3.57 Total: 7.42 kcal Atomic # 7 Polarization: -3.91 SS G_CDS: -3.81 Total: -7.72 kcal Atomic # 8 Polarization: -0.30 SS G_CDS: -1.90 Total: -2.20 kcal Atomic # 9 Polarization: -2.18 SS G_CDS: 1.53 Total: -0.65 kcal Atomic # 14 Polarization: -2.78 SS G_CDS: 2.05 Total: -0.74 kcal Total: -14.77 1.21 -13.56 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14412252_17656566.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.371 kcal (2) G-P(sol) polarization free energy of solvation -14.770 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.141 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.207 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.563 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.934 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds