Wall clock time and date at job start Mon Mar 8 2021 04:44:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34224 * 117.00077 * 2 1 4 4 O 1.20833 * 120.00103 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00302 * 180.02562 * 3 2 1 6 6 H 1.08995 * 109.47473 * 59.99636 * 5 3 2 7 7 C 1.52999 * 109.47581 * 180.02562 * 5 3 2 8 8 C 1.52997 * 109.47606 * 179.97438 * 7 5 3 9 9 C 1.52998 * 109.46630 * 299.99508 * 8 7 5 10 10 H 1.09003 * 109.47339 * 179.97438 * 9 8 7 11 11 N 1.46495 * 109.47792 * 299.99856 * 9 8 7 12 12 C 1.38396 * 120.00766 * 205.00370 * 11 9 8 13 13 N 1.32494 * 119.21329 * 359.72840 * 12 11 9 14 14 C 1.32284 * 120.74108 * 179.71874 * 13 12 11 15 15 C 1.38601 * 119.19502 * 0.54612 * 14 13 12 16 16 C 1.50702 * 120.72510 * 179.75149 * 15 14 13 17 17 O 1.42898 * 109.47347 * 119.97612 * 16 15 14 18 18 Si 1.86304 * 109.46770 * 359.97438 * 16 15 14 19 19 C 1.38615 * 118.56118 * 359.72702 * 15 14 13 20 20 N 1.32281 * 119.19161 * 0.02562 * 19 15 14 21 21 C 1.53006 * 109.47286 * 60.00179 * 9 8 7 22 22 C 1.52997 * 109.46769 * 299.99910 * 21 9 8 23 23 H 1.09001 * 109.47153 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.47070 * 300.00162 * 1 2 3 25 25 H 1.09001 * 109.46626 * 60.00180 * 1 2 3 26 26 H 1.09005 * 109.46903 * 300.00018 * 7 5 3 27 27 H 1.09000 * 109.47608 * 59.99121 * 7 5 3 28 28 H 1.09000 * 109.47303 * 59.98998 * 8 7 5 29 29 H 1.08995 * 109.47152 * 179.97438 * 8 7 5 30 30 H 0.97008 * 119.99116 * 25.00066 * 11 9 8 31 31 H 1.07993 * 120.40404 * 180.29812 * 14 13 12 32 32 H 1.08999 * 109.47589 * 239.97782 * 16 15 14 33 33 H 0.96703 * 113.99703 * 300.00487 * 17 16 15 34 34 H 1.48501 * 110.00071 * 58.68166 * 18 16 15 35 35 H 1.48491 * 109.99919 * 179.97438 * 18 16 15 36 36 H 1.07997 * 120.40534 * 179.97438 * 19 15 14 37 37 H 1.09003 * 109.46914 * 59.99560 * 21 9 8 38 38 H 1.09001 * 109.47019 * 179.97438 * 21 9 8 39 39 H 1.09003 * 109.47116 * 299.99526 * 22 21 9 40 40 H 1.09008 * 109.47127 * 179.97438 * 22 21 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9558 0.7809 -0.8907 7 6 4.0002 2.7420 0.0002 8 6 5.5281 2.8222 0.0002 9 6 6.0750 2.1281 1.2492 10 1 7.1636 2.1847 1.2491 11 7 5.5512 2.7915 2.4457 12 6 6.2507 2.7221 3.6379 13 7 7.3898 2.0467 3.6809 14 6 8.0856 1.9654 4.8029 15 6 7.6038 2.5875 5.9439 16 6 8.3657 2.5122 7.2420 17 8 8.7128 3.8314 7.6678 18 14 9.9173 1.5112 6.9941 19 6 6.4062 3.2809 5.8651 20 7 5.7624 3.3275 4.7104 21 6 5.6412 0.6608 1.2485 22 6 4.1134 0.5807 1.2484 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3632 0.5138 -0.8900 26 1 3.6101 3.2367 -0.8894 27 1 3.6108 3.2357 0.8905 28 1 5.9179 2.3284 -0.8899 29 1 5.8371 3.8674 0.0003 30 1 4.7140 3.2797 2.4022 31 1 9.0159 1.4175 4.8306 32 1 7.7443 2.0371 8.0011 33 1 9.2667 4.3145 7.0394 34 1 10.7585 2.1311 5.9389 35 1 10.6780 1.4300 8.2668 36 1 6.0031 3.7764 6.7360 37 1 6.0310 0.1671 0.3583 38 1 6.0313 0.1662 2.1381 39 1 3.7236 1.0744 2.1386 40 1 3.8043 -0.4646 1.2474 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14474852_12175864.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:44:07 Heat of formation + Delta-G solvation = -60.218940 kcal Electronic energy + Delta-G solvation = -23916.692890 eV Core-core repulsion = 20312.355156 eV Total energy + Delta-G solvation = -3604.337734 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.141 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.16836 -41.67922 -39.92545 -38.13457 -37.45284 -35.71527 -34.66839 -32.85828 -31.96460 -30.89055 -28.64012 -26.60856 -25.88532 -24.72533 -23.82270 -23.29107 -21.78730 -20.61178 -19.54262 -18.62088 -18.41281 -18.10277 -17.78352 -17.37029 -16.64663 -16.51285 -16.18327 -16.01582 -15.68129 -15.44063 -15.04883 -14.94764 -14.57401 -14.17815 -14.01183 -13.95466 -13.82553 -13.38256 -13.25293 -13.08180 -12.97233 -12.39304 -12.25231 -12.15202 -11.83203 -11.81564 -11.74787 -11.70488 -11.59918 -11.18777 -11.10217 -10.69106 -9.99690 -9.07991 -5.03316 0.09738 0.19293 1.20718 1.22224 1.52363 1.70274 1.84458 1.91751 2.85290 3.16314 3.31555 3.41016 3.50487 3.59499 3.63657 3.73064 3.78445 3.88937 3.95225 4.08773 4.16927 4.21591 4.23006 4.24230 4.30157 4.31230 4.52066 4.55680 4.59323 4.67171 4.78277 4.86134 4.92454 4.97254 5.03758 5.14535 5.17974 5.29041 5.42178 5.81864 6.04369 6.34364 6.43636 6.74914 7.32862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.462 3.538 4 O -0.505 6.505 5 C -0.079 4.079 6 H 0.113 0.887 7 C -0.107 4.107 8 C -0.128 4.128 9 C 0.157 3.843 10 H 0.098 0.902 11 N -0.689 5.689 12 C 0.569 3.431 13 N -0.561 5.561 14 C 0.199 3.801 15 C -0.294 4.294 16 C -0.053 4.053 17 O -0.530 6.530 18 Si 0.678 3.322 19 C 0.224 3.776 20 N -0.570 5.570 21 C -0.128 4.128 22 C -0.110 4.110 23 H 0.103 0.897 24 H 0.063 0.937 25 H 0.063 0.937 26 H 0.079 0.921 27 H 0.071 0.929 28 H 0.087 0.913 29 H 0.078 0.922 30 H 0.413 0.587 31 H 0.166 0.834 32 H 0.120 0.880 33 H 0.376 0.624 34 H -0.258 1.258 35 H -0.254 1.254 36 H 0.169 0.831 37 H 0.079 0.921 38 H 0.077 0.923 39 H 0.067 0.933 40 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.491 -4.002 -1.782 4.628 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.305 3.695 4 O -0.392 6.392 5 C -0.098 4.098 6 H 0.131 0.869 7 C -0.145 4.145 8 C -0.166 4.166 9 C 0.052 3.948 10 H 0.115 0.885 11 N -0.326 5.326 12 C 0.212 3.788 13 N -0.283 5.283 14 C 0.031 3.969 15 C -0.303 4.303 16 C -0.164 4.164 17 O -0.336 6.336 18 Si 0.579 3.421 19 C 0.055 3.945 20 N -0.292 5.292 21 C -0.167 4.167 22 C -0.148 4.148 23 H 0.121 0.879 24 H 0.082 0.918 25 H 0.082 0.918 26 H 0.098 0.902 27 H 0.089 0.911 28 H 0.105 0.895 29 H 0.097 0.903 30 H 0.252 0.748 31 H 0.183 0.817 32 H 0.137 0.863 33 H 0.223 0.777 34 H -0.182 1.182 35 H -0.178 1.178 36 H 0.186 0.814 37 H 0.098 0.902 38 H 0.095 0.905 39 H 0.086 0.914 40 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.311 -3.928 -2.320 4.746 hybrid contribution -0.116 1.391 0.612 1.525 sum 1.194 -2.537 -1.707 3.282 Atomic orbital electron populations 1.23312 0.76002 1.03961 1.02686 1.86505 1.23672 1.33386 1.83889 1.23843 0.92095 0.81404 0.72140 1.90693 1.67227 1.36376 1.44954 1.21151 0.86885 0.99399 1.02379 0.86939 1.21458 0.95557 0.93478 1.03974 1.21880 0.94999 1.02062 0.97618 1.21019 0.99640 0.91398 0.82707 0.88451 1.44395 1.25496 1.57179 1.05543 1.19417 0.86091 0.86590 0.86694 1.67937 1.08252 1.23008 1.29113 1.22781 0.96556 0.91031 0.86505 1.21640 1.01363 1.08663 0.98600 1.24669 1.06848 0.89749 0.95125 1.86610 1.72128 1.26246 1.48629 0.95270 0.77059 0.88586 0.81207 1.22829 0.88517 0.89106 0.94028 1.68000 1.36312 1.25217 0.99672 1.21959 0.94700 0.96425 1.03590 1.21510 0.96285 1.01229 0.95777 0.87873 0.91794 0.91775 0.90226 0.91081 0.89463 0.90318 0.74788 0.81725 0.86262 0.77662 1.18240 1.17829 0.81365 0.90223 0.90450 0.91383 0.90266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.50 10.47 -39.24 -0.41 -0.91 16 3 C 0.46 0.83 7.25 36.00 0.26 1.09 16 4 O -0.51 -2.39 15.73 -18.76 -0.30 -2.69 16 5 C -0.08 0.10 2.63 -91.77 -0.24 -0.14 16 6 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 7 C -0.11 0.15 4.32 -26.73 -0.12 0.04 16 8 C -0.13 0.36 5.61 -26.73 -0.15 0.21 16 9 C 0.16 -0.26 2.77 -67.93 -0.19 -0.45 16 10 H 0.10 -0.09 7.51 -51.93 -0.39 -0.48 16 11 N -0.69 -0.07 4.38 -55.80 -0.24 -0.31 16 12 C 0.57 1.16 8.40 -322.82 -2.71 -1.55 16 13 N -0.56 -0.83 9.21 -13.93 -0.13 -0.96 16 14 C 0.20 -0.03 9.92 -17.22 -0.17 -0.20 16 15 C -0.29 0.10 5.40 -104.35 -0.56 -0.47 16 16 C -0.05 0.07 2.85 36.01 0.10 0.17 16 17 O -0.53 -0.10 12.79 -35.23 -0.45 -0.55 16 18 Si 0.68 -1.36 29.87 -169.99 -5.08 -6.44 16 19 C 0.22 0.22 10.92 -17.22 -0.19 0.03 16 20 N -0.57 -1.54 10.46 -13.93 -0.15 -1.69 16 21 C -0.13 0.26 5.62 -26.73 -0.15 0.11 16 22 C -0.11 0.16 4.98 -26.73 -0.13 0.02 16 23 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 24 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.08 -0.06 8.10 -51.93 -0.42 -0.49 16 27 H 0.07 -0.03 6.46 -51.93 -0.34 -0.36 16 28 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 29 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 30 H 0.41 0.00 6.98 -40.82 -0.28 -0.28 16 31 H 0.17 -0.42 5.04 -52.49 -0.26 -0.69 16 32 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 33 H 0.38 -0.88 8.70 45.56 0.40 -0.49 16 34 H -0.26 0.02 7.11 56.52 0.40 0.43 16 35 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 36 H 0.17 -0.10 8.06 -52.49 -0.42 -0.52 16 37 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 38 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.07 0.00 7.60 -51.93 -0.39 -0.39 16 40 H 0.08 -0.11 8.11 -51.92 -0.42 -0.53 16 LS Contribution 327.98 15.07 4.94 4.94 Total: 0.00 -7.46 327.98 -10.52 -17.99 By element: Atomic # 1 Polarization: -3.77 SS G_CDS: -5.53 Total: -9.30 kcal Atomic # 6 Polarization: 3.11 SS G_CDS: -3.18 Total: -0.08 kcal Atomic # 7 Polarization: -2.44 SS G_CDS: -0.52 Total: -2.96 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -1.16 Total: -4.15 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.08 Total: -6.44 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -7.46 -10.52 -17.99 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14474852_12175864.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.233 kcal (2) G-P(sol) polarization free energy of solvation -7.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.523 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.986 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.219 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds