Wall clock time and date at job start Mon Mar 8 2021 04:44:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34235 * 116.99569 * 2 1 4 4 O 1.20813 * 120.00426 * 0.02562 * 3 2 1 5 5 C 1.50707 * 119.99548 * 180.02562 * 3 2 1 6 6 H 1.08997 * 109.46934 * 299.99950 * 5 3 2 7 7 C 1.52994 * 109.47457 * 60.00006 * 5 3 2 8 8 C 1.53002 * 109.47421 * 179.97438 * 7 5 3 9 9 C 1.53000 * 109.47022 * 300.00341 * 8 7 5 10 10 H 1.08995 * 109.47062 * 180.02562 * 9 8 7 11 11 N 1.46500 * 109.46817 * 299.99510 * 9 8 7 12 12 C 1.39004 * 120.00487 * 275.00254 * 11 9 8 13 13 N 1.32392 * 119.70730 * 180.02562 * 12 11 9 14 14 C 1.31976 * 121.61887 * 179.72422 * 13 12 11 15 15 C 1.38022 * 120.85502 * 0.54346 * 14 13 12 16 16 C 1.50699 * 120.33216 * 179.72353 * 15 14 13 17 17 O 1.42903 * 109.47152 * 244.72624 * 16 15 14 18 18 Si 1.86305 * 109.47184 * 4.72096 * 16 15 14 19 19 C 1.38880 * 119.33082 * 359.45053 * 15 14 13 20 20 C 1.38301 * 118.50424 * 0.27084 * 19 15 14 21 21 C 1.52994 * 109.47301 * 59.99585 * 9 8 7 22 22 C 1.53000 * 109.46927 * 180.02562 * 5 3 2 23 23 H 1.09001 * 109.47370 * 59.99911 * 1 2 3 24 24 H 1.08995 * 109.46959 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.46834 * 300.00025 * 1 2 3 26 26 H 1.09004 * 109.47265 * 299.99852 * 7 5 3 27 27 H 1.09005 * 109.46956 * 59.99719 * 7 5 3 28 28 H 1.08997 * 109.47132 * 179.97438 * 8 7 5 29 29 H 1.09003 * 109.46526 * 59.99690 * 8 7 5 30 30 H 0.97001 * 119.99900 * 95.00434 * 11 9 8 31 31 H 1.08005 * 119.56897 * 180.28660 * 14 13 12 32 32 H 1.08997 * 109.47198 * 124.72302 * 16 15 14 33 33 H 0.96700 * 114.00311 * 180.02562 * 17 16 15 34 34 H 1.48499 * 109.99670 * 178.68093 * 18 16 15 35 35 H 1.48497 * 110.00233 * 300.00062 * 18 16 15 36 36 H 1.07998 * 120.74532 * 180.25278 * 19 15 14 37 37 H 1.07999 * 120.44790 * 179.97438 * 20 19 15 38 38 H 1.08997 * 109.47094 * 60.00033 * 21 9 8 39 39 H 1.09004 * 109.47265 * 180.02562 * 21 9 8 40 40 H 1.08994 * 109.47206 * 59.99764 * 22 5 3 41 41 H 1.08997 * 109.47020 * 299.99587 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2750 -0.0006 6 1 3.9564 0.7807 0.8891 7 6 4.1129 0.5817 -1.2501 8 6 5.6408 0.6623 -1.2510 9 6 6.0741 2.1297 -1.2511 10 1 7.1625 2.1871 -1.2522 11 7 5.5494 2.7936 -2.4470 12 6 6.2513 2.7247 -3.6448 13 7 5.7719 3.3273 -4.7218 14 6 6.4096 3.2907 -5.8767 15 6 7.6023 2.6081 -6.0054 16 6 8.3175 2.5688 -7.3313 17 8 8.3490 1.2248 -7.8158 18 14 7.4180 3.6488 -8.5542 19 6 8.1396 1.9627 -4.8992 20 6 7.4516 2.0233 -3.7010 21 6 5.5275 2.8230 -0.0016 22 6 4.0001 2.7422 0.0002 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 3.8039 -0.4636 -1.2502 27 1 3.7228 1.0760 -2.1399 28 1 6.0302 0.1680 -2.1410 29 1 6.0312 0.1683 -0.3612 30 1 4.7121 3.2814 -2.4029 31 1 5.9906 3.7980 -6.7332 32 1 9.3368 2.9336 -7.2053 33 1 8.7957 1.1241 -8.6675 34 1 8.1311 3.6437 -9.8568 35 1 6.0269 3.1618 -8.7349 36 1 9.0736 1.4254 -4.9731 37 1 7.8406 1.5325 -2.8211 38 1 5.9179 2.3290 0.8881 39 1 5.8358 3.8685 -0.0019 40 1 3.6107 3.2357 0.8906 41 1 3.6100 3.2368 -0.8893 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14474852_13915762.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:44:10 Heat of formation + Delta-G solvation = -75.394494 kcal Electronic energy + Delta-G solvation = -23761.364066 eV Core-core repulsion = 20221.794181 eV Total energy + Delta-G solvation = -3539.569884 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.88686 -41.28587 -39.82143 -37.90517 -37.43794 -35.62663 -33.48662 -32.35618 -31.83824 -30.54991 -28.62994 -26.27145 -25.16582 -24.43584 -23.75386 -22.65495 -21.70802 -20.44270 -18.81264 -18.59340 -18.45873 -17.91167 -17.78807 -17.31113 -16.60552 -16.31930 -16.09858 -15.73787 -15.28917 -15.06776 -14.92186 -14.80291 -14.24938 -14.10112 -13.94377 -13.88478 -13.78840 -13.68928 -13.39337 -13.18763 -12.97894 -12.39629 -12.29416 -12.14317 -11.91432 -11.79930 -11.69365 -11.57364 -11.20413 -10.98408 -10.64981 -10.52732 -10.22901 -8.63328 -4.94155 0.33265 0.51493 1.21169 1.31750 1.60975 1.71061 1.98068 2.12381 2.87783 3.38534 3.43642 3.46229 3.56501 3.68037 3.84215 3.88060 3.91798 4.02555 4.05732 4.14963 4.17154 4.18285 4.22284 4.25412 4.28843 4.37211 4.47224 4.55472 4.59491 4.65671 4.74806 4.82414 4.89328 4.96287 4.99807 5.09537 5.11445 5.17004 5.37420 5.42417 5.59262 6.07417 6.47112 6.59718 6.75356 7.24848 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.359 6.359 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.079 4.079 6 H 0.112 0.888 7 C -0.109 4.109 8 C -0.135 4.135 9 C 0.151 3.849 10 H 0.088 0.912 11 N -0.716 5.716 12 C 0.410 3.590 13 N -0.540 5.540 14 C 0.159 3.841 15 C -0.190 4.190 16 C -0.059 4.059 17 O -0.538 6.538 18 Si 0.676 3.324 19 C -0.005 4.005 20 C -0.240 4.240 21 C -0.125 4.125 22 C -0.107 4.107 23 H 0.063 0.937 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.079 0.921 27 H 0.070 0.930 28 H 0.075 0.925 29 H 0.080 0.920 30 H 0.405 0.595 31 H 0.154 0.846 32 H 0.074 0.926 33 H 0.378 0.622 34 H -0.260 1.260 35 H -0.254 1.254 36 H 0.133 0.867 37 H 0.134 0.866 38 H 0.085 0.915 39 H 0.080 0.920 40 H 0.079 0.921 41 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.555 -0.615 2.173 4.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.305 3.695 4 O -0.392 6.392 5 C -0.098 4.098 6 H 0.130 0.870 7 C -0.147 4.147 8 C -0.174 4.174 9 C 0.045 3.955 10 H 0.106 0.894 11 N -0.350 5.350 12 C 0.174 3.826 13 N -0.256 5.256 14 C 0.001 3.999 15 C -0.195 4.195 16 C -0.170 4.170 17 O -0.345 6.345 18 Si 0.577 3.423 19 C -0.031 4.031 20 C -0.265 4.265 21 C -0.163 4.163 22 C -0.145 4.145 23 H 0.082 0.918 24 H 0.121 0.879 25 H 0.082 0.918 26 H 0.097 0.903 27 H 0.089 0.911 28 H 0.093 0.907 29 H 0.098 0.902 30 H 0.242 0.758 31 H 0.171 0.829 32 H 0.092 0.908 33 H 0.226 0.774 34 H -0.185 1.185 35 H -0.178 1.178 36 H 0.151 0.849 37 H 0.152 0.848 38 H 0.104 0.896 39 H 0.099 0.901 40 H 0.098 0.902 41 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 1.866 -0.035 2.205 2.889 hybrid contribution 0.691 -1.285 -0.569 1.566 sum 2.558 -1.320 1.636 3.311 Atomic orbital electron populations 1.23310 0.75994 1.03957 1.02697 1.86506 1.23685 1.33396 1.83906 1.23826 0.92081 0.81409 0.72168 1.90688 1.67208 1.36370 1.44896 1.21146 0.86942 0.99448 1.02266 0.87028 1.21470 0.95909 1.01288 0.95993 1.22060 0.95466 0.96493 1.03404 1.21043 0.98842 0.91626 0.83952 0.89378 1.44684 1.26249 1.58068 1.05982 1.18398 0.88363 0.89508 0.86347 1.67179 1.35144 1.24341 0.98978 1.22186 0.89882 0.93805 0.94019 1.19888 0.98708 1.05795 0.95074 1.24514 1.03904 0.89638 0.98938 1.86600 1.81271 1.25743 1.40921 0.95176 0.79871 0.88290 0.78944 1.21163 0.98226 0.92872 0.90831 1.21456 0.97411 1.07721 0.99869 1.21822 0.95117 1.02090 0.97257 1.21445 0.95495 0.93438 1.04080 0.91787 0.87887 0.91758 0.90278 0.91087 0.90672 0.90181 0.75764 0.82898 0.90839 0.77395 1.18520 1.17818 0.84876 0.84794 0.89625 0.90129 0.90246 0.90897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.59 10.47 -39.27 -0.41 -1.00 16 3 C 0.46 0.92 7.26 36.01 0.26 1.18 16 4 O -0.50 -2.49 15.73 -18.74 -0.29 -2.78 16 5 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 6 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 7 C -0.11 0.14 4.98 -26.73 -0.13 0.01 16 8 C -0.14 0.35 5.52 -26.73 -0.15 0.21 16 9 C 0.15 -0.38 2.47 -67.93 -0.17 -0.55 16 10 H 0.09 -0.28 6.45 -51.93 -0.33 -0.61 16 11 N -0.72 0.14 4.40 -53.94 -0.24 -0.09 16 12 C 0.41 0.80 7.63 -155.03 -1.18 -0.38 16 13 N -0.54 -1.93 10.39 -12.44 -0.13 -2.06 16 14 C 0.16 0.39 9.84 -17.57 -0.17 0.22 16 15 C -0.19 -0.34 5.39 -104.46 -0.56 -0.90 16 16 C -0.06 -0.01 2.81 36.01 0.10 0.09 16 17 O -0.54 -0.73 12.82 -35.23 -0.45 -1.18 16 18 Si 0.68 -0.36 29.87 -169.99 -5.08 -5.44 16 19 C -0.01 -0.01 9.84 -39.32 -0.39 -0.39 16 20 C -0.24 -0.19 8.83 -39.23 -0.35 -0.54 16 21 C -0.13 0.40 5.61 -26.76 -0.15 0.25 16 22 C -0.11 0.16 4.32 -26.76 -0.12 0.04 16 23 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 24 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 25 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 26 H 0.08 -0.09 8.11 -51.93 -0.42 -0.51 16 27 H 0.07 0.03 7.60 -51.93 -0.39 -0.37 16 28 H 0.07 -0.12 7.66 -51.93 -0.40 -0.52 16 29 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.40 0.09 6.99 -40.82 -0.29 -0.19 16 31 H 0.15 0.11 4.87 -52.48 -0.26 -0.15 16 32 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 33 H 0.38 -0.99 8.74 45.56 0.40 -0.59 16 34 H -0.26 -0.35 7.11 56.52 0.40 0.06 16 35 H -0.25 -0.68 7.06 56.52 0.40 -0.28 16 36 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 37 H 0.13 -0.18 6.07 -52.49 -0.32 -0.50 16 38 H 0.09 -0.38 8.14 -51.93 -0.42 -0.81 16 39 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 40 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 41 H 0.07 -0.01 6.46 -51.93 -0.34 -0.35 16 LS Contribution 329.59 15.07 4.97 4.97 Total: 0.00 -7.82 329.59 -9.57 -17.39 By element: Atomic # 1 Polarization: -4.20 SS G_CDS: -5.76 Total: -9.96 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -2.18 Total: 0.15 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -0.37 Total: -2.15 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -1.16 Total: -4.96 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.08 Total: -5.44 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -7.82 -9.57 -17.39 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14474852_13915762.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.004 kcal (2) G-P(sol) polarization free energy of solvation -7.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.820 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.575 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.391 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds