Wall clock time and date at job start Mon Mar 8 2021 04:37:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52992 * 109.46961 * 2 1 4 4 C 1.52997 * 109.47317 * 120.00461 * 2 1 3 5 5 H 1.09002 * 109.47153 * 299.99641 * 4 2 1 6 6 C 1.53000 * 109.47060 * 59.99960 * 4 2 1 7 7 C 1.53001 * 109.46886 * 180.02562 * 6 4 2 8 8 C 1.53002 * 109.46963 * 299.99499 * 7 6 4 9 9 H 1.09002 * 109.47067 * 300.00341 * 8 7 6 10 10 N 1.46496 * 109.47313 * 180.02562 * 8 7 6 11 11 C 1.38401 * 120.00186 * 85.00075 * 10 8 7 12 12 N 1.32495 * 119.21796 * 359.73059 * 11 10 8 13 13 C 1.32279 * 120.73847 * 179.72022 * 12 11 10 14 14 C 1.38600 * 119.19802 * 0.54072 * 13 12 11 15 15 C 1.50703 * 120.71795 * 179.75265 * 14 13 12 16 16 O 1.42906 * 109.46964 * 244.97840 * 15 14 13 17 17 Si 1.86290 * 109.47285 * 4.98214 * 15 14 13 18 18 C 1.38606 * 118.55896 * 359.73592 * 14 13 12 19 19 N 1.32271 * 119.19729 * 359.97438 * 18 14 13 20 20 C 1.52997 * 109.47092 * 60.00194 * 8 7 6 21 21 C 1.53002 * 109.46817 * 179.97438 * 4 2 1 22 22 H 1.09000 * 109.47486 * 59.99547 * 1 2 3 23 23 H 1.09001 * 109.47362 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.46716 * 299.99630 * 1 2 3 25 25 H 1.09002 * 109.46716 * 240.00370 * 2 1 3 26 26 H 1.09001 * 109.47066 * 180.02562 * 3 2 1 27 27 H 1.08996 * 109.47747 * 300.00196 * 3 2 1 28 28 H 1.09002 * 109.47103 * 60.00608 * 3 2 1 29 29 H 1.09001 * 109.47194 * 299.99650 * 6 4 2 30 30 H 1.08992 * 109.47399 * 59.99823 * 6 4 2 31 31 H 1.09000 * 109.47437 * 180.02562 * 7 6 4 32 32 H 1.09002 * 109.47508 * 59.99571 * 7 6 4 33 33 H 0.97007 * 119.99693 * 264.99991 * 10 8 7 34 34 H 1.08000 * 120.39970 * 180.30397 * 13 12 11 35 35 H 1.09004 * 109.46754 * 124.98395 * 15 14 13 36 36 H 0.96695 * 113.99937 * 60.00551 * 16 15 14 37 37 H 1.48507 * 110.00150 * 179.97438 * 17 15 14 38 38 H 1.48502 * 110.00117 * 301.31512 * 17 15 14 39 39 H 1.08003 * 120.40021 * 179.97438 * 18 14 13 40 40 H 1.09001 * 109.47375 * 180.02562 * 20 8 7 41 41 H 1.09002 * 109.47497 * 59.99850 * 20 8 7 42 42 H 1.09002 * 109.47075 * 299.99262 * 21 4 2 43 43 H 1.08996 * 109.47407 * 60.00219 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4424 0.0000 4 6 2.0400 -0.7213 1.2491 5 1 1.6768 -0.2075 2.1392 6 6 1.5300 -2.1638 1.2490 7 6 2.0396 -2.8850 2.4985 8 6 3.5696 -2.8850 2.4990 9 1 3.9332 -3.3989 1.6092 10 7 4.0576 -3.5760 3.6951 11 6 4.1898 -4.9537 3.6929 12 7 3.8654 -5.6328 2.6024 13 6 3.9852 -6.9496 2.5654 14 6 4.4455 -7.6185 3.6886 15 6 4.5898 -9.1186 3.6860 16 8 3.6763 -9.6867 4.6268 17 14 4.2163 -9.7755 1.9832 18 6 4.7704 -6.8778 4.8142 19 7 4.6329 -5.5626 4.7830 20 6 4.0796 -1.4425 2.4991 21 6 3.5701 -0.7218 1.2487 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8901 25 1 1.8933 -0.5138 -0.8901 26 1 3.1299 1.4425 -0.0005 27 1 1.6766 1.9563 -0.8899 28 1 1.6767 1.9562 0.8901 29 1 0.4400 -2.1639 1.2491 30 1 1.8933 -2.6776 0.3591 31 1 1.6767 -3.9128 2.4983 32 1 1.6760 -2.3710 3.3884 33 1 4.2880 -3.0679 4.4886 34 1 3.7239 -7.4972 1.6719 35 1 5.6096 -9.3859 3.9630 36 1 2.7479 -9.4891 4.4420 37 1 4.3557 -11.2539 1.9672 38 1 2.8396 -9.3904 1.5810 39 1 5.1314 -7.3686 5.7060 40 1 5.1696 -1.4425 2.4989 41 1 3.7160 -0.9285 3.3889 42 1 3.9330 -1.2360 0.3587 43 1 3.9338 0.3057 1.2486 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14589128_12175864.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:53 Heat of formation + Delta-G solvation = 3.158501 kcal Electronic energy + Delta-G solvation = -22002.824278 eV Core-core repulsion = 18855.750083 eV Total energy + Delta-G solvation = -3147.074195 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 278.174 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.06642 -40.38833 -38.27508 -37.21024 -34.81848 -34.55508 -32.30606 -31.94116 -29.36407 -28.08396 -26.50136 -25.80816 -23.89356 -23.45971 -22.84018 -21.18765 -20.71802 -19.31173 -18.67993 -18.12953 -16.91958 -16.56803 -16.13905 -16.00553 -15.80737 -15.60094 -15.22349 -15.20622 -14.64859 -14.59963 -14.43507 -14.20478 -13.96916 -13.43772 -13.18863 -13.15419 -12.82733 -12.72765 -12.37832 -12.20637 -12.14594 -12.08912 -11.80720 -11.73897 -11.71372 -11.45135 -11.32745 -11.05866 -10.80933 -10.69289 -9.96867 -9.05450 -5.02133 0.11179 0.21146 1.22871 1.52340 1.85290 1.91731 2.86670 3.18610 3.33892 3.59454 3.63597 3.65644 3.70956 3.74841 3.85358 3.98262 4.08846 4.21786 4.27829 4.28698 4.36035 4.47931 4.50997 4.56261 4.60190 4.62508 4.74023 4.75426 4.82058 4.93690 4.95278 4.99397 5.04371 5.08258 5.14234 5.16617 5.25336 5.26642 5.32768 5.39635 5.48753 5.57107 5.84454 6.07190 6.35455 6.46709 7.35201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.092 4.092 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.070 0.930 6 C -0.112 4.112 7 C -0.128 4.128 8 C 0.161 3.839 9 H 0.093 0.907 10 N -0.692 5.692 11 C 0.569 3.431 12 N -0.560 5.560 13 C 0.197 3.803 14 C -0.294 4.294 15 C -0.052 4.052 16 O -0.530 6.530 17 Si 0.679 3.321 18 C 0.224 3.776 19 N -0.571 5.571 20 C -0.128 4.128 21 C -0.111 4.111 22 H 0.053 0.947 23 H 0.057 0.943 24 H 0.053 0.947 25 H 0.070 0.930 26 H 0.057 0.943 27 H 0.053 0.947 28 H 0.053 0.947 29 H 0.068 0.932 30 H 0.065 0.935 31 H 0.066 0.934 32 H 0.061 0.939 33 H 0.413 0.587 34 H 0.166 0.834 35 H 0.120 0.880 36 H 0.375 0.625 37 H -0.253 1.253 38 H -0.258 1.258 39 H 0.169 0.831 40 H 0.069 0.931 41 H 0.068 0.932 42 H 0.066 0.934 43 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.682 1.712 -2.417 3.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.103 4.103 5 H 0.089 0.911 6 C -0.150 4.150 7 C -0.167 4.167 8 C 0.056 3.944 9 H 0.111 0.889 10 N -0.327 5.327 11 C 0.212 3.788 12 N -0.283 5.283 13 C 0.029 3.971 14 C -0.303 4.303 15 C -0.164 4.164 16 O -0.336 6.336 17 Si 0.580 3.420 18 C 0.055 3.945 19 N -0.293 5.293 20 C -0.166 4.166 21 C -0.149 4.149 22 H 0.072 0.928 23 H 0.076 0.924 24 H 0.072 0.928 25 H 0.088 0.912 26 H 0.076 0.924 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.086 0.914 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.079 0.921 33 H 0.250 0.750 34 H 0.182 0.818 35 H 0.137 0.863 36 H 0.223 0.777 37 H -0.178 1.178 38 H -0.183 1.183 39 H 0.186 0.814 40 H 0.088 0.912 41 H 0.086 0.914 42 H 0.085 0.915 43 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.552 2.116 -2.804 3.556 hybrid contribution -0.799 -0.666 1.161 1.559 sum -0.247 1.450 -1.643 2.205 Atomic orbital electron populations 1.21910 0.95268 1.01888 1.01756 1.21136 0.95761 0.96149 0.98005 1.21911 1.01174 0.95945 1.01787 1.21260 0.95018 0.95740 0.98243 0.91118 1.21603 1.00746 0.94887 0.97784 1.21938 0.95095 1.01080 0.98552 1.21037 0.93735 0.92051 0.87568 0.88913 1.44353 1.69926 1.00939 1.17473 1.19420 0.86994 0.87304 0.85040 1.67953 1.23874 1.08758 1.27674 1.22838 0.88448 0.89199 0.96583 1.21623 1.11917 0.98751 0.97993 1.24665 0.97292 0.89689 1.04742 1.86612 1.19727 1.76094 1.51181 0.95179 0.85879 0.82157 0.78783 1.22830 0.87402 0.87440 0.96812 1.67997 1.21728 1.11847 1.27694 1.21836 1.01032 0.94203 0.99509 1.21598 0.95316 1.00682 0.97306 0.92763 0.92365 0.92764 0.91177 0.92365 0.92766 0.92739 0.91366 0.91583 0.91550 0.92052 0.74977 0.81761 0.86263 0.77693 1.17779 1.18267 0.81363 0.91207 0.91354 0.91510 0.90983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 8.84 37.16 0.33 0.47 16 2 C -0.09 0.11 2.50 -90.63 -0.23 -0.12 16 3 C -0.15 0.18 8.84 37.15 0.33 0.51 16 4 C -0.08 0.12 1.78 -90.62 -0.16 -0.04 16 5 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 6 C -0.11 0.10 4.85 -26.73 -0.13 -0.03 16 7 C -0.13 0.01 5.51 -26.73 -0.15 -0.14 16 8 C 0.16 -0.04 2.44 -67.93 -0.17 -0.21 16 9 H 0.09 0.09 7.51 -51.93 -0.39 -0.30 16 10 N -0.69 -0.58 5.22 -55.80 -0.29 -0.88 16 11 C 0.57 1.57 8.40 -322.81 -2.71 -1.14 16 12 N -0.56 -1.35 9.21 -13.93 -0.13 -1.48 16 13 C 0.20 0.11 9.92 -17.23 -0.17 -0.06 16 14 C -0.29 -0.03 5.36 -104.35 -0.56 -0.59 16 15 C -0.05 0.06 2.83 36.01 0.10 0.16 16 16 O -0.53 -0.24 12.85 -35.23 -0.45 -0.70 16 17 Si 0.68 -1.16 29.95 -169.99 -5.09 -6.25 16 18 C 0.22 0.28 10.99 -17.23 -0.19 0.09 16 19 N -0.57 -1.74 10.46 -13.93 -0.15 -1.89 16 20 C -0.13 0.20 5.39 -26.71 -0.14 0.06 16 21 C -0.11 0.19 4.85 -26.70 -0.13 0.06 16 22 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 23 H 0.06 -0.06 6.43 -51.93 -0.33 -0.39 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 26 H 0.06 -0.08 6.43 -51.93 -0.33 -0.42 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 29 H 0.07 -0.05 6.43 -51.93 -0.33 -0.38 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 32 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.41 -0.06 8.72 -40.82 -0.36 -0.41 16 34 H 0.17 -0.28 5.01 -52.49 -0.26 -0.55 16 35 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 36 H 0.38 -0.78 8.70 45.56 0.40 -0.38 16 37 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 38 H -0.26 -0.03 7.02 56.52 0.40 0.37 16 39 H 0.17 -0.09 8.06 -52.48 -0.42 -0.51 16 40 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 42 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.07 -0.14 6.43 -51.93 -0.33 -0.47 16 LS Contribution 333.71 15.07 5.03 5.03 Total: 0.00 -4.75 333.71 -12.12 -16.87 By element: Atomic # 1 Polarization: -2.67 SS G_CDS: -7.06 Total: -9.73 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: -3.98 Total: -0.98 kcal Atomic # 7 Polarization: -3.68 SS G_CDS: -0.57 Total: -4.24 kcal Atomic # 8 Polarization: -0.24 SS G_CDS: -0.45 Total: -0.70 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.09 Total: -6.25 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -4.75 -12.12 -16.87 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14589128_12175864.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.030 kcal (2) G-P(sol) polarization free energy of solvation -4.754 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.871 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.159 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds