Wall clock time and date at job start Mon Mar 8 2021 04:37:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53007 * 109.46970 * 2 1 4 4 C 1.52997 * 109.47143 * 120.00325 * 2 1 3 5 5 H 1.08996 * 109.46952 * 299.99863 * 4 2 1 6 6 C 1.52996 * 109.47131 * 60.00169 * 4 2 1 7 7 C 1.52997 * 109.47131 * 179.97438 * 6 4 2 8 8 C 1.52999 * 109.46991 * 299.99311 * 7 6 4 9 9 H 1.08993 * 109.47839 * 300.00447 * 8 7 6 10 10 N 1.46504 * 109.47050 * 179.97438 * 8 7 6 11 11 C 1.39004 * 119.99474 * 85.00529 * 10 8 7 12 12 N 1.32400 * 119.70199 * 179.72634 * 11 10 8 13 13 C 1.31974 * 121.61841 * 179.71079 * 12 11 10 14 14 C 1.38027 * 120.85607 * 0.56359 * 13 12 11 15 15 C 1.50700 * 120.33239 * 179.69729 * 14 13 12 16 16 O 1.42897 * 109.47661 * 245.02562 * 15 14 13 17 17 Si 1.86305 * 109.47412 * 5.02992 * 15 14 13 18 18 C 1.38878 * 119.32914 * 359.72833 * 14 13 12 19 19 C 1.38300 * 118.50818 * 359.97438 * 18 14 13 20 20 C 1.53006 * 109.46626 * 60.00378 * 8 7 6 21 21 C 1.52997 * 109.47127 * 299.99539 * 20 8 7 22 22 H 1.09004 * 109.46930 * 299.99609 * 1 2 3 23 23 H 1.09004 * 109.47059 * 59.99211 * 1 2 3 24 24 H 1.08992 * 109.47060 * 179.97438 * 1 2 3 25 25 H 1.09000 * 109.46497 * 240.00555 * 2 1 3 26 26 H 1.09001 * 109.46479 * 60.00410 * 3 2 1 27 27 H 1.08998 * 109.46501 * 179.97438 * 3 2 1 28 28 H 1.09000 * 109.47376 * 300.00295 * 3 2 1 29 29 H 1.09001 * 109.46993 * 300.00131 * 6 4 2 30 30 H 1.09000 * 109.47380 * 59.99237 * 6 4 2 31 31 H 1.09002 * 109.47153 * 179.97438 * 7 6 4 32 32 H 1.08993 * 109.47194 * 60.00154 * 7 6 4 33 33 H 0.96998 * 120.00034 * 265.00623 * 10 8 7 34 34 H 1.08000 * 119.57314 * 180.28917 * 13 12 11 35 35 H 1.09001 * 109.46853 * 125.02523 * 15 14 13 36 36 H 0.96694 * 113.99744 * 59.99766 * 16 15 14 37 37 H 1.48502 * 109.99602 * 58.67686 * 17 15 14 38 38 H 1.48490 * 110.00107 * 179.97438 * 17 15 14 39 39 H 1.08003 * 120.74395 * 179.97438 * 18 14 13 40 40 H 1.08002 * 120.45088 * 179.97438 * 19 18 14 41 41 H 1.09001 * 109.46801 * 59.99811 * 20 8 7 42 42 H 1.09001 * 109.46998 * 179.97438 * 20 8 7 43 43 H 1.09002 * 109.47153 * 180.02562 * 21 20 8 44 44 H 1.08996 * 109.46952 * 300.00302 * 21 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7213 1.2492 5 1 1.6767 -0.2075 2.1391 6 6 1.5301 -2.1638 1.2491 7 6 2.0406 -2.8853 2.4979 8 6 3.5706 -2.8854 2.4972 9 1 3.9336 -3.3989 1.6070 10 7 4.0594 -3.5757 3.6933 11 6 4.1922 -4.9594 3.6916 12 7 4.6397 -5.5768 4.7740 13 6 4.7751 -6.8889 4.8159 14 6 4.4632 -7.6681 3.7201 15 6 4.6287 -9.1649 3.7786 16 8 5.6422 -9.5686 2.8558 17 14 5.1229 -9.6681 5.5030 18 6 3.9959 -7.0588 2.5629 19 6 3.8586 -5.6827 2.5508 20 6 4.0806 -1.4428 2.4973 21 6 3.5700 -0.7213 1.2484 22 1 -0.3633 0.5138 0.8901 23 1 -0.3633 0.5140 -0.8899 24 1 -0.3633 -1.0276 -0.0005 25 1 1.8932 -0.5138 -0.8901 26 1 1.6767 1.9563 0.8901 27 1 3.1300 1.4425 0.0005 28 1 1.6766 1.9565 -0.8899 29 1 0.4401 -2.1638 1.2490 30 1 1.8933 -2.6775 0.3590 31 1 1.6769 -3.9128 2.4981 32 1 1.6776 -2.3717 3.3881 33 1 4.2905 -3.0672 4.4864 34 1 5.1388 -7.3587 5.7178 35 1 3.6861 -9.6452 3.5161 36 1 6.5099 -9.1786 3.0291 37 1 4.0920 -9.2259 6.4762 38 1 5.2887 -11.1420 5.5741 39 1 3.7454 -7.6464 1.6920 40 1 3.4983 -5.1763 1.6675 41 1 3.7176 -0.9292 3.3876 42 1 5.1706 -1.4428 2.4972 43 1 3.9337 0.3062 1.2483 44 1 3.9330 -1.2350 0.3582 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14589128_13915762.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:56 Heat of formation + Delta-G solvation = -14.750966 kcal Electronic energy + Delta-G solvation = -21822.445683 eV Core-core repulsion = 18740.020786 eV Total energy + Delta-G solvation = -3082.424897 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 277.178 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.49151 -40.35518 -38.08704 -37.08666 -34.63318 -33.32013 -32.08598 -31.49079 -29.24239 -28.12978 -26.21494 -24.87083 -23.85428 -23.43840 -22.35154 -21.15570 -20.77039 -18.64716 -18.44018 -17.66881 -16.70986 -16.47800 -16.08041 -15.94859 -15.53183 -15.32866 -15.25958 -15.10476 -14.55780 -14.46323 -14.27400 -14.14861 -13.98791 -13.51380 -13.39456 -13.20200 -12.85877 -12.75897 -12.46734 -12.30494 -12.20299 -12.15473 -11.97761 -11.75297 -11.46694 -11.34278 -11.12269 -10.84096 -10.66464 -10.36275 -10.33816 -8.66071 -5.00804 0.29181 0.46943 1.33934 1.66463 2.01105 2.08550 2.90385 3.49559 3.53160 3.56293 3.62389 3.69369 3.82028 3.89174 3.99040 4.03261 4.11136 4.15735 4.21532 4.26935 4.35638 4.41965 4.44035 4.51808 4.55073 4.56159 4.69232 4.71392 4.78279 4.87943 4.90628 4.92676 4.97476 5.01060 5.05004 5.07699 5.08981 5.17244 5.26061 5.27702 5.36518 5.43024 5.50359 5.57034 6.04544 6.57701 6.62276 7.20547 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.092 4.092 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.114 4.114 7 C -0.135 4.135 8 C 0.155 3.845 9 H 0.082 0.918 10 N -0.719 5.719 11 C 0.410 3.590 12 N -0.541 5.541 13 C 0.158 3.842 14 C -0.238 4.238 15 C -0.052 4.052 16 O -0.543 6.543 17 Si 0.680 3.320 18 C -0.005 4.005 19 C -0.240 4.240 20 C -0.126 4.126 21 C -0.112 4.112 22 H 0.054 0.946 23 H 0.054 0.946 24 H 0.057 0.943 25 H 0.069 0.931 26 H 0.054 0.946 27 H 0.057 0.943 28 H 0.054 0.946 29 H 0.070 0.930 30 H 0.064 0.936 31 H 0.065 0.935 32 H 0.067 0.933 33 H 0.405 0.595 34 H 0.154 0.846 35 H 0.111 0.889 36 H 0.378 0.622 37 H -0.256 1.256 38 H -0.254 1.254 39 H 0.134 0.866 40 H 0.133 0.867 41 H 0.069 0.931 42 H 0.070 0.930 43 H 0.072 0.928 44 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.832 3.050 -1.320 3.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.103 4.103 5 H 0.090 0.910 6 C -0.152 4.152 7 C -0.174 4.174 8 C 0.050 3.950 9 H 0.100 0.900 10 N -0.350 5.350 11 C 0.175 3.825 12 N -0.258 5.258 13 C 0.000 4.000 14 C -0.243 4.243 15 C -0.164 4.164 16 O -0.348 6.348 17 Si 0.582 3.418 18 C -0.031 4.031 19 C -0.265 4.265 20 C -0.164 4.164 21 C -0.150 4.150 22 H 0.073 0.927 23 H 0.073 0.927 24 H 0.076 0.924 25 H 0.088 0.912 26 H 0.073 0.927 27 H 0.076 0.924 28 H 0.073 0.927 29 H 0.088 0.912 30 H 0.082 0.918 31 H 0.084 0.916 32 H 0.086 0.914 33 H 0.240 0.760 34 H 0.171 0.829 35 H 0.128 0.872 36 H 0.225 0.775 37 H -0.181 1.181 38 H -0.178 1.178 39 H 0.152 0.848 40 H 0.151 0.849 41 H 0.088 0.912 42 H 0.089 0.911 43 H 0.091 0.909 44 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 0.274 2.832 -0.303 2.861 hybrid contribution -0.674 -0.145 -0.796 1.053 sum -0.399 2.687 -1.099 2.930 Atomic orbital electron populations 1.21912 0.95224 1.01883 1.01824 1.21141 0.95794 0.96199 0.97930 1.21914 1.01174 0.95908 1.01840 1.21256 0.95012 0.95648 0.98352 0.91009 1.21628 1.00975 0.95077 0.97544 1.22049 0.95155 1.01180 0.99015 1.21057 0.93643 0.92801 0.87533 0.90003 1.44655 1.71202 1.02345 1.16833 1.18403 0.89364 0.85513 0.89256 1.67148 1.20360 1.11222 1.27064 1.22176 0.93201 0.88127 0.96508 1.20969 1.09601 0.97296 0.96449 1.24774 0.94338 0.91994 1.05253 1.86490 1.21219 1.71986 1.55103 0.94906 0.89620 0.81971 0.75301 1.21186 0.91345 0.93545 0.97041 1.21489 1.10871 0.94762 0.99346 1.21790 1.01107 0.93938 0.99530 1.21606 0.95301 1.00834 0.97300 0.92712 0.92733 0.92383 0.91215 0.92707 0.92360 0.92726 0.91158 0.91767 0.91592 0.91445 0.75957 0.82906 0.87156 0.77458 1.18102 1.17840 0.84774 0.84894 0.91212 0.91084 0.90896 0.91602 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.20 8.84 37.16 0.33 0.53 16 2 C -0.09 0.15 2.50 -90.62 -0.23 -0.07 16 3 C -0.15 0.23 8.84 37.16 0.33 0.56 16 4 C -0.08 0.17 1.78 -90.62 -0.16 0.01 16 5 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 6 C -0.11 0.22 4.85 -26.73 -0.13 0.09 16 7 C -0.14 0.18 5.42 -26.73 -0.14 0.03 16 8 C 0.15 -0.23 2.14 -67.93 -0.15 -0.37 16 9 H 0.08 -0.11 6.45 -51.93 -0.34 -0.44 16 10 N -0.72 -0.08 5.25 -53.93 -0.28 -0.36 16 11 C 0.41 0.83 7.63 -155.02 -1.18 -0.35 16 12 N -0.54 -1.66 10.39 -12.44 -0.13 -1.78 16 13 C 0.16 0.23 9.84 -17.57 -0.17 0.06 16 14 C -0.24 -0.23 5.36 -104.46 -0.56 -0.79 16 15 C -0.05 -0.01 2.82 36.01 0.10 0.09 16 16 O -0.54 -0.30 12.84 -35.23 -0.45 -0.76 16 17 Si 0.68 -0.42 29.83 -169.99 -5.07 -5.49 16 18 C -0.01 -0.01 9.83 -39.32 -0.39 -0.39 16 19 C -0.24 -0.26 8.83 -39.23 -0.35 -0.61 16 20 C -0.13 0.28 5.39 -26.73 -0.14 0.13 16 21 C -0.11 0.26 4.85 -26.73 -0.13 0.13 16 22 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 23 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.06 -0.08 6.43 -51.93 -0.33 -0.42 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.06 -0.10 6.43 -51.93 -0.33 -0.44 16 28 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 -0.11 6.43 -51.93 -0.33 -0.45 16 30 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 31 H 0.07 -0.02 7.66 -51.93 -0.40 -0.42 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 33 H 0.40 -0.10 8.73 -40.82 -0.36 -0.46 16 34 H 0.15 -0.11 4.91 -52.49 -0.26 -0.37 16 35 H 0.11 0.06 7.96 -51.93 -0.41 -0.36 16 36 H 0.38 -1.18 8.70 45.56 0.40 -0.79 16 37 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 38 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 39 H 0.13 -0.01 8.06 -52.48 -0.42 -0.43 16 40 H 0.13 -0.05 6.08 -52.49 -0.32 -0.37 16 41 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.07 -0.17 6.43 -51.93 -0.33 -0.50 16 44 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 LS Contribution 335.27 15.07 5.05 5.05 Total: 0.00 -4.59 335.27 -11.14 -15.74 By element: Atomic # 1 Polarization: -4.15 SS G_CDS: -7.29 Total: -11.44 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -2.97 Total: -0.95 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -0.41 Total: -2.15 kcal Atomic # 8 Polarization: -0.30 SS G_CDS: -0.45 Total: -0.76 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: -5.07 Total: -5.49 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -4.59 -11.14 -15.74 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14589128_13915762.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.985 kcal (2) G-P(sol) polarization free energy of solvation -4.592 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.736 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds