Wall clock time and date at job start Mon Mar 8 2021 04:38:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.33323 * 125.95291 * 2 1 4 4 C 1.50701 * 122.70901 * 0.02562 * 3 2 1 5 5 O 1.42898 * 109.47108 * 44.28369 * 4 3 2 6 6 Si 1.86305 * 109.47161 * 164.28880 * 4 3 2 7 7 N 1.32121 * 114.58631 * 179.97438 * 3 2 1 8 8 C 1.29699 * 116.86002 * 359.97438 * 7 3 2 9 9 N 1.38614 * 124.94474 * 179.97438 * 8 7 3 10 10 C 1.46499 * 119.99429 * 179.72272 * 9 8 7 11 11 H 1.09004 * 109.47402 * 325.27698 * 10 9 8 12 12 C 1.53002 * 109.47108 * 85.28042 * 10 9 8 13 13 C 1.52990 * 109.47267 * 179.97438 * 12 10 9 14 14 C 1.53004 * 109.47434 * 299.99910 * 13 12 10 15 15 H 1.08993 * 109.46559 * 300.00208 * 14 13 12 16 16 C 1.52995 * 109.47180 * 179.97438 * 14 13 12 17 17 C 1.53002 * 109.47222 * 60.00273 * 16 14 13 18 18 C 1.53004 * 109.47180 * 180.02562 * 16 14 13 19 19 C 1.53002 * 109.46820 * 59.99816 * 14 13 12 20 20 C 1.52998 * 109.46941 * 205.27885 * 10 9 8 21 21 S 1.70961 * 110.10182 * 0.24366 * 8 7 3 22 22 H 1.08998 * 109.46876 * 84.37291 * 1 2 3 23 23 H 1.09000 * 109.46871 * 204.36524 * 1 2 3 24 24 H 1.08993 * 109.47302 * 324.37466 * 1 2 3 25 25 H 1.08999 * 109.47224 * 284.28333 * 4 3 2 26 26 H 0.96704 * 113.99615 * 60.00501 * 5 4 3 27 27 H 1.48496 * 110.00227 * 58.67886 * 6 4 3 28 28 H 1.48503 * 109.99786 * 180.02562 * 6 4 3 29 29 H 0.97000 * 119.99795 * 0.02562 * 9 8 7 30 30 H 1.08997 * 109.46671 * 300.00066 * 12 10 9 31 31 H 1.09002 * 109.47033 * 59.99092 * 12 10 9 32 32 H 1.09002 * 109.47369 * 179.97438 * 13 12 10 33 33 H 1.09004 * 109.47014 * 59.99796 * 13 12 10 34 34 H 1.08999 * 109.47813 * 300.00417 * 16 14 13 35 35 H 1.09004 * 109.47270 * 59.99614 * 17 16 14 36 36 H 1.08994 * 109.47312 * 179.97438 * 17 16 14 37 37 H 1.09008 * 109.46972 * 299.99773 * 17 16 14 38 38 H 1.08994 * 109.47512 * 180.02562 * 18 16 14 39 39 H 1.09004 * 109.46927 * 300.00150 * 18 16 14 40 40 H 1.09002 * 109.46936 * 59.99831 * 18 16 14 41 41 H 1.08997 * 109.46671 * 179.97438 * 19 14 13 42 42 H 1.09004 * 109.47270 * 60.00333 * 19 14 13 43 43 H 1.09004 * 109.46919 * 300.00108 * 20 10 9 44 44 H 1.08997 * 109.47614 * 60.00171 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 0.0006 5 8 0.6700 2.5754 0.9416 6 14 3.0905 3.6765 0.4760 7 7 3.5850 0.8189 0.0005 8 6 3.9315 -0.4310 0.0015 9 7 5.2385 -0.8926 0.0017 10 6 5.5066 -2.3328 0.0090 11 1 4.7437 -2.8415 0.5984 12 6 5.4807 -2.8637 -1.4258 13 6 5.7612 -4.3676 -1.4183 14 6 7.1382 -4.6266 -0.8035 15 1 7.9007 -4.1176 -1.3931 16 6 7.4184 -6.1306 -0.7955 17 6 7.3923 -6.6620 -2.2300 18 6 8.7951 -6.3896 -0.1802 19 6 7.1641 -4.0957 0.6312 20 6 6.8833 -2.5922 0.6239 21 16 2.5413 -1.4261 -0.0050 22 1 -0.3633 0.1008 -1.0227 23 1 -0.3633 -0.9361 0.4240 24 1 -0.3633 0.8353 0.5985 25 1 1.3726 2.7294 -0.9951 26 1 0.9264 2.3689 1.8509 27 1 4.2243 3.5674 -0.4768 28 1 2.5623 5.0644 0.4809 29 1 5.9755 -0.2620 0.0014 30 1 4.4999 -2.6788 -1.8638 31 1 6.2435 -2.3549 -2.0152 32 1 5.7423 -4.7459 -2.4404 33 1 4.9986 -4.8765 -0.8287 34 1 6.6558 -6.6393 -0.2058 35 1 8.1550 -6.1534 -2.8198 36 1 7.5924 -7.7334 -2.2243 37 1 6.4113 -6.4775 -2.6680 38 1 8.9950 -7.4610 -0.1748 39 1 9.5581 -5.8810 -0.7696 40 1 8.8133 -6.0111 0.8419 41 1 8.1449 -4.2806 1.0693 42 1 6.4015 -4.6046 1.2208 43 1 7.6462 -2.0835 0.0344 44 1 6.9019 -2.2141 1.6460 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14589128_15704122.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:01 Heat of formation + Delta-G solvation = -11.591119 kcal Electronic energy + Delta-G solvation = -22408.336240 eV Core-core repulsion = 19259.662992 eV Total energy + Delta-G solvation = -3148.673248 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.150 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.06600 -40.49211 -38.02608 -37.10392 -34.63952 -32.62047 -32.10880 -29.93114 -28.57047 -28.15114 -25.59417 -24.61166 -23.77799 -23.33211 -21.58920 -20.82255 -20.28426 -19.05319 -17.89349 -17.29212 -16.95256 -16.57770 -16.15620 -15.58596 -15.47985 -15.33215 -15.22602 -14.77135 -14.62903 -14.42646 -14.09125 -13.93726 -13.66366 -13.54921 -13.29798 -13.20634 -12.94509 -12.83317 -12.64159 -12.50467 -12.28077 -12.20469 -12.13742 -11.83192 -11.75225 -11.48082 -11.30251 -11.16203 -10.78144 -10.50298 -10.25580 -9.94410 -8.57736 -4.75986 0.08883 0.23804 0.84754 1.49163 1.87857 1.93478 2.00135 2.27381 3.40977 3.45681 3.50636 3.56872 3.65932 3.84780 3.92581 4.06885 4.16755 4.20913 4.22306 4.34826 4.36165 4.42283 4.47146 4.50569 4.57758 4.64628 4.69765 4.81011 4.82014 4.86555 4.88664 4.93351 4.96540 4.98763 5.02063 5.04273 5.12749 5.17757 5.23192 5.26481 5.37817 5.40470 5.47708 5.66420 6.31952 6.54396 7.01726 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C -0.234 4.234 3 C 0.063 3.937 4 C -0.035 4.035 5 O -0.535 6.535 6 Si 0.722 3.278 7 N -0.545 5.545 8 C 0.321 3.679 9 N -0.691 5.691 10 C 0.153 3.847 11 H 0.082 0.918 12 C -0.136 4.136 13 C -0.114 4.114 14 C -0.085 4.085 15 H 0.072 0.928 16 C -0.092 4.092 17 C -0.151 4.151 18 C -0.151 4.151 19 C -0.113 4.113 20 C -0.124 4.124 21 S 0.098 5.902 22 H 0.067 0.933 23 H 0.061 0.939 24 H 0.100 0.900 25 H 0.118 0.882 26 H 0.380 0.620 27 H -0.257 1.257 28 H -0.265 1.265 29 H 0.411 0.589 30 H 0.066 0.934 31 H 0.070 0.930 32 H 0.072 0.928 33 H 0.065 0.935 34 H 0.070 0.930 35 H 0.054 0.946 36 H 0.054 0.946 37 H 0.057 0.943 38 H 0.054 0.946 39 H 0.054 0.946 40 H 0.058 0.942 41 H 0.074 0.926 42 H 0.066 0.934 43 H 0.072 0.928 44 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.930 -3.975 2.153 4.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.357 4.357 3 C -0.067 4.067 4 C -0.148 4.148 5 O -0.340 6.340 6 Si 0.624 3.376 7 N -0.272 5.272 8 C -0.050 4.050 9 N -0.331 5.331 10 C 0.048 3.952 11 H 0.099 0.901 12 C -0.176 4.176 13 C -0.152 4.152 14 C -0.103 4.103 15 H 0.091 0.909 16 C -0.110 4.110 17 C -0.209 4.209 18 C -0.208 4.208 19 C -0.151 4.151 20 C -0.162 4.162 21 S 0.347 5.653 22 H 0.085 0.915 23 H 0.080 0.920 24 H 0.118 0.882 25 H 0.135 0.865 26 H 0.227 0.773 27 H -0.182 1.182 28 H -0.191 1.191 29 H 0.249 0.751 30 H 0.085 0.915 31 H 0.088 0.912 32 H 0.090 0.910 33 H 0.084 0.916 34 H 0.088 0.912 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.076 0.924 38 H 0.073 0.927 39 H 0.073 0.927 40 H 0.076 0.924 41 H 0.093 0.907 42 H 0.085 0.915 43 H 0.090 0.910 44 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 2.366 -4.002 1.371 4.847 hybrid contribution -0.168 0.579 -0.599 0.850 sum 2.198 -3.423 0.772 4.140 Atomic orbital electron populations 1.20339 0.86630 1.03632 1.03068 1.25161 1.01245 0.92779 1.16478 1.20074 0.86726 0.97188 1.02726 1.24562 0.98072 0.95868 0.96284 1.86450 1.35280 1.91807 1.20470 0.93744 0.77098 0.75282 0.91506 1.65915 1.17160 1.16644 1.27486 1.23276 0.91876 0.91428 0.98447 1.44112 1.01702 1.07108 1.80167 1.21197 0.98535 0.78550 0.96963 0.90051 1.22064 1.02667 0.96563 0.96276 1.21626 0.96999 0.94779 1.01779 1.21265 0.97371 0.95514 0.96164 0.90938 1.21136 0.97875 0.95100 0.96928 1.21914 1.01937 1.00914 0.96097 1.21915 0.96522 1.01592 1.00818 1.21608 1.02610 0.93876 0.96984 1.21769 0.95184 0.97757 1.01506 1.84001 0.96579 1.10672 1.74051 0.91454 0.91994 0.88159 0.86477 0.77283 1.18179 1.19068 0.75067 0.91506 0.91155 0.90955 0.91606 0.91163 0.92712 0.92702 0.92355 0.92702 0.92703 0.92351 0.90702 0.91495 0.90950 0.90830 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.05 9.97 36.00 0.36 0.31 16 2 C -0.23 -0.50 6.49 -36.03 -0.23 -0.73 16 3 C 0.06 0.17 6.00 -84.18 -0.51 -0.33 16 4 C -0.03 -0.06 2.74 36.01 0.10 0.04 16 5 O -0.54 -0.28 10.22 -35.23 -0.36 -0.64 16 6 Si 0.72 1.13 31.88 -169.99 -5.42 -4.29 16 7 N -0.55 -1.88 8.61 -11.36 -0.10 -1.98 16 8 C 0.32 0.66 8.22 -87.67 -0.72 -0.06 16 9 N -0.69 0.09 5.23 -55.78 -0.29 -0.20 16 10 C 0.15 -0.25 2.40 -67.93 -0.16 -0.41 16 11 H 0.08 -0.10 7.26 -51.93 -0.38 -0.48 16 12 C -0.14 0.19 5.51 -26.73 -0.15 0.05 16 13 C -0.11 0.24 4.85 -26.73 -0.13 0.11 16 14 C -0.08 0.20 1.78 -90.62 -0.16 0.04 16 15 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 16 C -0.09 0.18 2.50 -90.62 -0.23 -0.05 16 17 C -0.15 0.24 8.84 37.16 0.33 0.57 16 18 C -0.15 0.27 8.84 37.16 0.33 0.60 16 19 C -0.11 0.31 4.85 -26.75 -0.13 0.18 16 20 C -0.12 0.33 5.39 -26.76 -0.14 0.19 16 21 S 0.10 0.12 21.68 -107.50 -2.33 -2.21 16 22 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 23 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 24 H 0.10 0.05 5.67 -51.93 -0.29 -0.25 16 25 H 0.12 0.22 7.96 -51.93 -0.41 -0.19 16 26 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 27 H -0.26 -1.30 7.11 56.52 0.40 -0.90 16 28 H -0.26 -1.03 7.11 56.52 0.40 -0.63 16 29 H 0.41 -0.30 8.73 -40.82 -0.36 -0.66 16 30 H 0.07 -0.02 8.04 -51.93 -0.42 -0.44 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.07 -0.13 6.43 -51.93 -0.33 -0.47 16 33 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 34 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 37 H 0.06 -0.10 6.43 -51.92 -0.33 -0.43 16 38 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 40 H 0.06 -0.12 6.43 -51.93 -0.33 -0.46 16 41 H 0.07 -0.21 6.43 -51.93 -0.33 -0.54 16 42 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 43 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 44 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 LS Contribution 348.12 15.07 5.25 5.25 Total: 0.00 -4.29 348.12 -12.19 -16.48 By element: Atomic # 1 Polarization: -5.42 SS G_CDS: -7.49 Total: -12.91 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -1.45 Total: 0.50 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -0.39 Total: -2.18 kcal Atomic # 8 Polarization: -0.28 SS G_CDS: -0.36 Total: -0.64 kcal Atomic # 14 Polarization: 1.13 SS G_CDS: -5.42 Total: -4.29 kcal Atomic # 16 Polarization: 0.12 SS G_CDS: -2.33 Total: -2.21 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -4.29 -12.19 -16.48 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14589128_15704122.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.890 kcal (2) G-P(sol) polarization free energy of solvation -4.291 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.599 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.482 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds