Wall clock time and date at job start Mon Mar 8 2021 04:38:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52997 * 109.47164 * 2 1 4 4 C 1.52997 * 109.47127 * 239.99836 * 2 1 3 5 5 H 1.09001 * 109.46832 * 60.00321 * 4 2 1 6 6 C 1.52996 * 109.47131 * 179.97438 * 4 2 1 7 7 C 1.52997 * 109.47131 * 180.02562 * 6 4 2 8 8 C 1.52997 * 109.47232 * 300.00126 * 7 6 4 9 9 H 1.09001 * 109.47375 * 299.99867 * 8 7 6 10 10 N 1.46507 * 109.47235 * 180.02562 * 8 7 6 11 11 C 1.39138 * 119.99890 * 155.00422 * 10 8 7 12 12 N 1.32334 * 119.72073 * 359.97438 * 11 10 8 13 13 C 1.32012 * 121.64512 * 179.97438 * 12 11 10 14 14 C 1.37980 * 120.90081 * 0.02562 * 13 12 11 15 15 C 1.50707 * 120.32673 * 179.97438 * 14 13 12 16 16 O 1.42900 * 109.47058 * 119.99774 * 15 14 13 17 17 Si 1.86303 * 109.46911 * 0.02562 * 15 14 13 18 18 C 1.38904 * 119.35207 * 0.02562 * 14 13 12 19 19 C 1.38450 * 118.47894 * 359.74650 * 18 14 13 20 20 F 1.35105 * 120.47120 * 180.26913 * 19 18 14 21 21 C 1.52996 * 109.46975 * 60.00237 * 8 7 6 22 22 C 1.52997 * 109.47232 * 300.00122 * 4 2 1 23 23 H 1.09001 * 109.47002 * 59.99738 * 1 2 3 24 24 H 1.08993 * 109.46955 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47050 * 300.00004 * 1 2 3 26 26 H 1.09001 * 109.46998 * 119.99705 * 2 1 3 27 27 H 1.09001 * 109.47230 * 179.97438 * 3 2 1 28 28 H 1.09001 * 109.47375 * 300.00034 * 3 2 1 29 29 H 1.09000 * 109.47140 * 60.00051 * 3 2 1 30 30 H 1.09000 * 109.47380 * 300.00763 * 6 4 2 31 31 H 1.09001 * 109.46997 * 60.00426 * 6 4 2 32 32 H 1.08998 * 109.47076 * 60.00779 * 7 6 4 33 33 H 1.09002 * 109.47153 * 180.02562 * 7 6 4 34 34 H 0.97003 * 119.99653 * 335.00077 * 10 8 7 35 35 H 1.08000 * 119.54612 * 179.97438 * 13 12 11 36 36 H 1.08994 * 109.47393 * 240.00291 * 15 14 13 37 37 H 0.96695 * 114.00043 * 300.00881 * 16 15 14 38 38 H 1.48495 * 109.99918 * 179.97438 * 17 15 14 39 39 H 1.48494 * 110.00224 * 301.31798 * 17 15 14 40 40 H 1.07997 * 120.76298 * 179.97438 * 18 14 13 41 41 H 1.09001 * 109.47367 * 60.00185 * 21 8 7 42 42 H 1.09004 * 109.47108 * 179.97438 * 21 8 7 43 43 H 1.08998 * 109.47624 * 300.00318 * 22 4 2 44 44 H 1.09002 * 109.47045 * 59.99942 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 1 1.6767 -0.2074 -2.1392 6 6 3.5700 -0.7207 -1.2495 7 6 4.0800 -1.4414 -2.4990 8 6 3.5705 -2.8841 -2.4994 9 1 3.9342 -3.3981 -1.6096 10 7 4.0594 -3.5744 -3.6956 11 6 4.1927 -4.9594 -3.6939 12 7 3.8767 -5.6476 -2.6086 13 6 3.9880 -6.9623 -2.5653 14 6 4.4418 -7.6714 -3.6585 15 6 4.5644 -9.1721 -3.5947 16 8 3.7318 -9.7610 -4.5957 17 14 4.0285 -9.7679 -1.9128 18 6 4.7856 -6.9884 -4.8182 19 6 4.6541 -5.6103 -4.8363 20 9 4.9718 -4.9062 -5.9448 21 6 2.0406 -2.8846 -2.4991 22 6 1.5301 -2.1637 -1.2492 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 1.8934 -0.5138 0.8900 27 1 3.1301 1.4425 0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.6767 1.9563 0.8900 30 1 3.9330 0.3071 -1.2496 31 1 3.9337 -1.2343 -0.3595 32 1 3.7164 -0.9274 -3.3888 33 1 5.1700 -1.4414 -2.4990 34 1 4.2901 -3.0658 -4.4887 35 1 3.7210 -7.4899 -1.6616 36 1 5.6011 -9.4597 -3.7691 37 1 2.7934 -9.5470 -4.5025 38 1 4.1441 -11.2464 -1.8372 39 1 4.8655 -9.1380 -0.8604 40 1 5.1436 -7.5205 -5.6871 41 1 1.6769 -2.3707 -3.3889 42 1 1.6776 -3.9124 -2.4998 43 1 1.8933 -2.6776 -0.3592 44 1 0.4400 -2.1637 -1.2492 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14589128_17656566.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:03 Heat of formation + Delta-G solvation = -59.208274 kcal Electronic energy + Delta-G solvation = -24275.897055 eV Core-core repulsion = 20722.090369 eV Total energy + Delta-G solvation = -3553.806686 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.169 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -49.83071 -41.45913 -40.30784 -38.16679 -37.07458 -34.70811 -33.16313 -31.94890 -31.59165 -29.21956 -28.07895 -26.41802 -25.10782 -23.57252 -23.39765 -22.70194 -21.16192 -20.70672 -19.25223 -18.47828 -18.27983 -17.56767 -16.93895 -16.79211 -16.10852 -16.05961 -15.86542 -15.35091 -15.28508 -15.24693 -14.94085 -14.50722 -14.44705 -14.30840 -14.20657 -13.90110 -13.47262 -13.41605 -13.15309 -12.80427 -12.76360 -12.56668 -12.35196 -12.13319 -12.08178 -12.06295 -11.72236 -11.46428 -11.33818 -11.05330 -10.86364 -10.61057 -10.59344 -10.43700 -8.71687 -5.08804 -0.03387 0.15990 1.23168 1.57819 1.93254 1.99291 2.59472 3.07874 3.28694 3.42254 3.60151 3.64180 3.65286 3.74922 3.86286 3.98511 4.03096 4.09977 4.27965 4.29612 4.37019 4.42270 4.44994 4.51510 4.55663 4.61498 4.64291 4.72066 4.75875 4.79883 4.94198 4.95819 5.00003 5.01109 5.05464 5.09960 5.15163 5.18246 5.26322 5.32410 5.33838 5.46388 5.49540 5.58183 6.01302 6.22099 6.52934 6.99792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.092 4.092 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.070 0.930 6 C -0.111 4.111 7 C -0.129 4.129 8 C 0.157 3.843 9 H 0.091 0.909 10 N -0.714 5.714 11 C 0.393 3.607 12 N -0.511 5.511 13 C 0.147 3.853 14 C -0.212 4.212 15 C -0.054 4.054 16 O -0.541 6.541 17 Si 0.686 3.314 18 C -0.037 4.037 19 C -0.023 4.023 20 F -0.134 7.134 21 C -0.127 4.127 22 C -0.112 4.112 23 H 0.053 0.947 24 H 0.058 0.942 25 H 0.053 0.947 26 H 0.070 0.930 27 H 0.057 0.943 28 H 0.053 0.947 29 H 0.053 0.947 30 H 0.071 0.929 31 H 0.065 0.935 32 H 0.067 0.933 33 H 0.068 0.932 34 H 0.410 0.590 35 H 0.162 0.838 36 H 0.115 0.885 37 H 0.380 0.620 38 H -0.251 1.251 39 H -0.254 1.254 40 H 0.149 0.851 41 H 0.060 0.940 42 H 0.068 0.932 43 H 0.065 0.935 44 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.365 1.468 1.743 3.285 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.088 0.912 6 C -0.149 4.149 7 C -0.167 4.167 8 C 0.053 3.947 9 H 0.109 0.891 10 N -0.346 5.346 11 C 0.154 3.846 12 N -0.227 5.227 13 C -0.010 4.010 14 C -0.217 4.217 15 C -0.166 4.166 16 O -0.346 6.346 17 Si 0.587 3.413 18 C -0.064 4.064 19 C -0.049 4.049 20 F -0.113 7.113 21 C -0.166 4.166 22 C -0.150 4.150 23 H 0.072 0.928 24 H 0.077 0.923 25 H 0.072 0.928 26 H 0.088 0.912 27 H 0.076 0.924 28 H 0.073 0.927 29 H 0.072 0.928 30 H 0.089 0.911 31 H 0.084 0.916 32 H 0.085 0.915 33 H 0.086 0.914 34 H 0.247 0.753 35 H 0.179 0.821 36 H 0.132 0.868 37 H 0.227 0.773 38 H -0.176 1.176 39 H -0.179 1.179 40 H 0.166 0.834 41 H 0.079 0.921 42 H 0.087 0.913 43 H 0.084 0.916 44 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -1.908 1.393 3.135 3.925 hybrid contribution 0.957 0.124 -1.748 1.997 sum -0.950 1.517 1.387 2.265 Atomic orbital electron populations 1.21908 0.95231 1.01913 1.01746 1.21138 0.95787 0.96121 0.98011 1.21913 1.01152 0.95982 1.01779 1.21254 0.94962 0.95822 0.98204 0.91158 1.21585 0.95378 1.00628 0.97323 1.21828 1.00924 0.94461 0.99446 1.21008 0.93766 0.92017 0.87918 0.89053 1.44745 1.70725 1.01696 1.17388 1.18442 0.91323 0.86431 0.88400 1.67312 1.21906 1.08699 1.24830 1.22340 0.92943 0.88672 0.97040 1.20915 1.07958 0.97726 0.95144 1.24851 0.98287 0.89518 1.03940 1.86507 1.21894 1.73661 1.52538 0.94826 0.90790 0.80956 0.74712 1.21265 0.94936 0.91107 0.99069 1.18020 1.11671 0.90584 0.84623 1.91490 1.91227 1.78339 1.50264 1.21940 0.95079 1.01175 0.98432 1.21612 1.00744 0.94828 0.97844 0.92759 0.92316 0.92784 0.91203 0.92406 0.92743 0.92770 0.91078 0.91582 0.91468 0.91376 0.75266 0.82133 0.86763 0.77306 1.17616 1.17880 0.83375 0.92141 0.91313 0.91622 0.91325 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.16 8.84 37.16 0.33 0.49 16 2 C -0.09 0.11 2.51 -90.62 -0.23 -0.12 16 3 C -0.15 0.17 8.84 37.16 0.33 0.50 16 4 C -0.08 0.12 1.77 -90.62 -0.16 -0.04 16 5 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 6 C -0.11 0.17 4.85 -26.73 -0.13 0.04 16 7 C -0.13 0.18 5.39 -26.73 -0.14 0.04 16 8 C 0.16 -0.06 2.47 -67.93 -0.17 -0.23 16 9 H 0.09 0.09 7.54 -51.93 -0.39 -0.30 16 10 N -0.71 -0.26 5.23 -53.85 -0.28 -0.54 16 11 C 0.39 0.70 7.47 -154.87 -1.16 -0.45 16 12 N -0.51 -0.87 9.20 -12.37 -0.11 -0.98 16 13 C 0.15 0.01 9.84 -17.57 -0.17 -0.16 16 14 C -0.21 0.02 5.40 -104.47 -0.56 -0.54 16 15 C -0.05 0.05 2.84 36.01 0.10 0.15 16 16 O -0.54 0.21 12.78 -35.23 -0.45 -0.24 16 17 Si 0.69 -1.25 29.82 -169.99 -5.07 -6.32 16 18 C -0.04 -0.03 9.75 -39.26 -0.38 -0.42 16 19 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 20 F -0.13 -0.35 16.65 2.25 0.04 -0.31 16 21 C -0.13 0.06 5.51 -26.70 -0.15 -0.09 16 22 C -0.11 0.13 4.86 -26.70 -0.13 0.00 16 23 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 24 H 0.06 -0.07 6.43 -51.93 -0.33 -0.40 16 25 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.06 -0.08 6.43 -51.93 -0.33 -0.41 16 28 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.07 -0.12 6.43 -51.93 -0.33 -0.45 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.41 -0.23 8.07 -40.82 -0.33 -0.55 16 35 H 0.16 -0.35 4.88 -52.49 -0.26 -0.61 16 36 H 0.12 -0.06 7.96 -51.93 -0.41 -0.48 16 37 H 0.38 -1.57 8.70 45.56 0.40 -1.18 16 38 H -0.25 -0.38 7.11 56.52 0.40 0.03 16 39 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 40 H 0.15 0.03 8.06 -52.49 -0.42 -0.40 16 41 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.07 -0.07 6.43 -51.93 -0.33 -0.41 16 LS Contribution 344.19 15.07 5.19 5.19 Total: 0.00 -4.26 344.19 -10.62 -14.88 By element: Atomic # 1 Polarization: -3.48 SS G_CDS: -7.02 Total: -10.50 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -2.91 Total: -1.18 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -0.40 Total: -1.52 kcal Atomic # 8 Polarization: 0.21 SS G_CDS: -0.45 Total: -0.24 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.07 Total: -6.32 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -4.26 -10.62 -14.88 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14589128_17656566.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.326 kcal (2) G-P(sol) polarization free energy of solvation -4.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.882 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.208 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds