Wall clock time and date at job start Mon Mar 8 2021 04:39:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.09000 * 109.47303 * 300.00327 * 6 4 3 8 8 C 1.53000 * 109.46900 * 60.00293 * 6 4 3 9 9 C 1.53002 * 109.47130 * 179.97438 * 8 6 4 10 10 C 1.53003 * 109.47284 * 300.00135 * 9 8 6 11 11 H 1.09001 * 109.46705 * 300.00146 * 10 9 8 12 12 N 1.46491 * 109.47083 * 179.97438 * 10 9 8 13 13 C 1.38412 * 120.00126 * 85.00060 * 12 10 9 14 14 N 1.32492 * 119.21356 * 359.73101 * 13 12 10 15 15 C 1.32279 * 120.74100 * 179.71666 * 14 13 12 16 16 C 1.38605 * 119.19302 * 0.54389 * 15 14 13 17 17 C 1.50696 * 120.72280 * 179.70794 * 16 15 14 18 18 O 1.42900 * 109.47483 * 120.02216 * 17 16 15 19 19 Si 1.86309 * 109.46949 * 0.02562 * 17 16 15 20 20 C 1.38610 * 118.56112 * 359.73196 * 16 15 14 21 21 N 1.32275 * 119.19423 * 359.97438 * 20 16 15 22 22 C 1.53000 * 109.46830 * 59.99666 * 10 9 8 23 23 C 1.52994 * 109.47562 * 300.00039 * 22 10 9 24 24 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 25 25 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 26 26 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 27 27 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 28 28 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 29 29 H 1.08998 * 109.47349 * 299.99708 * 8 6 4 30 30 H 1.09000 * 109.47115 * 59.99918 * 8 6 4 31 31 H 1.09003 * 109.47012 * 179.97438 * 9 8 6 32 32 H 1.09000 * 109.46905 * 60.00137 * 9 8 6 33 33 H 0.96999 * 120.00258 * 265.00252 * 12 10 9 34 34 H 1.07993 * 120.40371 * 180.24886 * 15 14 13 35 35 H 1.08999 * 109.47442 * 240.02250 * 17 16 15 36 36 H 0.96701 * 114.00047 * 300.00630 * 18 17 16 37 37 H 1.48495 * 109.99608 * 58.68290 * 19 17 16 38 38 H 1.48498 * 109.99674 * 179.97438 * 19 17 16 39 39 H 1.07996 * 120.40523 * 179.97438 * 20 16 15 40 40 H 1.09005 * 109.46870 * 179.97438 * 22 10 9 41 41 H 1.09000 * 109.47102 * 60.00156 * 22 10 9 42 42 H 1.09000 * 109.47007 * 300.00175 * 23 22 10 43 43 H 1.09003 * 109.47577 * 180.02562 * 23 22 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.5852 3.4690 -0.8904 8 6 3.4486 3.6850 1.2486 9 6 4.0339 5.0986 1.2484 10 6 5.5618 5.0181 1.2494 11 1 5.8970 4.4861 2.1399 12 7 6.1222 6.3716 1.2487 13 6 6.2897 7.0520 2.4423 14 7 5.9329 6.4664 3.5760 15 6 6.0848 7.0867 4.7344 16 6 6.6136 8.3678 4.7510 17 6 6.7955 9.1088 6.0505 18 8 8.1774 9.4264 6.2285 19 14 6.2177 8.0385 7.4618 20 6 6.9710 8.9529 3.5464 21 7 6.7984 8.2752 2.4236 22 6 6.0339 4.2704 0.0008 23 6 5.4487 2.8568 0.0010 24 1 -0.3635 -1.0276 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 1.8933 -0.5138 -0.8900 28 1 1.8933 -0.5139 0.8900 29 1 2.3601 3.7421 1.2481 30 1 3.7842 3.1533 2.1390 31 1 3.6972 5.6314 2.1378 32 1 3.6987 5.6305 0.3580 33 1 6.3759 6.7910 0.4116 34 1 5.7959 6.6027 5.6555 35 1 6.2112 10.0287 6.0292 36 1 8.7581 8.6537 6.2569 37 1 6.9852 6.7675 7.4824 38 1 6.3924 8.7578 8.7492 39 1 7.3854 9.9500 3.5247 40 1 7.1224 4.2134 0.0013 41 1 5.6987 4.8023 -0.8896 42 1 5.7839 2.3249 0.8914 43 1 5.7853 2.3240 -0.8883 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14589460_12175864.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:39:16 Heat of formation + Delta-G solvation = -69.571882 kcal Electronic energy + Delta-G solvation = -25272.779617 eV Core-core repulsion = 21512.498690 eV Total energy + Delta-G solvation = -3760.280927 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.12410 -41.67621 -39.75902 -38.18785 -37.58213 -36.09534 -34.68197 -33.09655 -32.51630 -31.91390 -30.50449 -26.78732 -25.91956 -25.12012 -23.87134 -23.72112 -22.97320 -21.86314 -21.00824 -19.35648 -18.73047 -18.60977 -18.15698 -17.55258 -17.54407 -16.59342 -16.55619 -16.20056 -15.86780 -15.69827 -15.47660 -15.30277 -14.90581 -14.59585 -14.50064 -14.20100 -14.00660 -13.85427 -13.62537 -13.36378 -13.19591 -12.92515 -12.70996 -12.51366 -12.49691 -12.30727 -12.22020 -11.90715 -11.84005 -11.72320 -11.53210 -11.47409 -11.20900 -11.12798 -10.70203 -10.01294 -9.10323 -5.03652 0.07917 0.17796 1.21671 1.23557 1.52227 1.64085 1.81413 1.91420 2.83650 3.14578 3.30456 3.43334 3.49271 3.55340 3.63749 3.71793 3.78873 3.86113 3.96069 3.99197 4.01102 4.12736 4.19171 4.22414 4.26746 4.29571 4.33317 4.52534 4.57080 4.64273 4.73607 4.77925 4.80264 4.85027 4.93090 5.00107 5.01358 5.05054 5.14396 5.18886 5.32635 5.50570 5.79285 6.02499 6.33649 6.41815 6.78717 7.31204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.107 4.107 9 C -0.127 4.127 10 C 0.158 3.842 11 H 0.095 0.905 12 N -0.692 5.692 13 C 0.569 3.431 14 N -0.561 5.561 15 C 0.199 3.801 16 C -0.293 4.293 17 C -0.052 4.052 18 O -0.530 6.530 19 Si 0.677 3.323 20 C 0.223 3.777 21 N -0.570 5.570 22 C -0.127 4.127 23 C -0.099 4.099 24 H 0.081 0.919 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.082 0.918 30 H 0.073 0.927 31 H 0.076 0.924 32 H 0.068 0.932 33 H 0.414 0.586 34 H 0.166 0.834 35 H 0.120 0.880 36 H 0.376 0.624 37 H -0.258 1.258 38 H -0.253 1.253 39 H 0.170 0.830 40 H 0.078 0.922 41 H 0.073 0.927 42 H 0.077 0.923 43 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.692 0.100 -0.262 3.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.145 4.145 9 C -0.165 4.165 10 C 0.052 3.948 11 H 0.113 0.887 12 N -0.327 5.327 13 C 0.212 3.788 14 N -0.283 5.283 15 C 0.031 3.969 16 C -0.302 4.302 17 C -0.164 4.164 18 O -0.336 6.336 19 Si 0.578 3.422 20 C 0.055 3.945 21 N -0.291 5.291 22 C -0.165 4.165 23 C -0.137 4.137 24 H 0.100 0.900 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.100 0.900 30 H 0.092 0.908 31 H 0.095 0.905 32 H 0.086 0.914 33 H 0.252 0.748 34 H 0.183 0.817 35 H 0.138 0.862 36 H 0.224 0.776 37 H -0.182 1.182 38 H -0.178 1.178 39 H 0.187 0.813 40 H 0.096 0.904 41 H 0.092 0.908 42 H 0.096 0.904 43 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -3.716 -0.729 -0.416 3.810 hybrid contribution 1.378 0.331 0.117 1.422 sum -2.338 -0.399 -0.299 2.390 Atomic orbital electron populations 1.21818 0.92354 1.03239 1.03650 1.23073 0.95579 0.79920 1.02715 1.86506 1.24442 1.32670 1.83783 1.23743 0.80671 0.92613 0.72177 1.90688 1.60467 1.43169 1.45024 1.21185 0.96664 0.89818 1.02357 0.87101 1.21486 1.01697 0.95269 0.96021 1.21945 0.94885 0.96434 1.03283 1.21062 0.92937 0.81012 0.99743 0.88688 1.44271 1.67594 1.16279 1.04570 1.19402 0.87014 0.85630 0.86745 1.67938 1.24647 1.37894 0.97825 1.22788 0.88685 0.90012 0.95384 1.21648 1.11275 0.98721 0.98535 1.24665 0.86036 1.06212 0.99456 1.86608 1.16273 1.36196 1.94532 0.95272 0.91248 0.77993 0.77689 1.22833 0.87781 0.98244 0.85643 1.67995 1.21139 1.07995 1.31988 1.21829 1.01593 0.95513 0.97573 1.21376 0.91543 0.96331 1.04477 0.90048 0.91350 0.91387 0.91159 0.91116 0.89962 0.90847 0.90506 0.91351 0.74838 0.81721 0.86217 0.77644 1.18237 1.17786 0.81296 0.90363 0.90819 0.90396 0.90173 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.49 10.12 -39.26 -0.40 -0.89 16 4 C 0.47 0.80 7.26 36.01 0.26 1.06 16 5 O -0.51 -2.36 15.73 -18.75 -0.29 -2.65 16 6 C -0.08 0.10 2.63 -91.77 -0.24 -0.14 16 7 H 0.11 -0.28 8.14 -51.93 -0.42 -0.71 16 8 C -0.11 0.18 5.14 -26.73 -0.14 0.05 16 9 C -0.13 0.21 5.51 -26.73 -0.15 0.06 16 10 C 0.16 -0.20 2.44 -67.93 -0.17 -0.36 16 11 H 0.10 0.02 7.51 -51.93 -0.39 -0.37 16 12 N -0.69 0.11 5.22 -55.80 -0.29 -0.18 16 13 C 0.57 1.12 8.40 -322.80 -2.71 -1.59 16 14 N -0.56 -0.96 9.21 -13.93 -0.13 -1.08 16 15 C 0.20 0.00 9.92 -17.22 -0.17 -0.17 16 16 C -0.29 0.11 5.40 -104.35 -0.56 -0.45 16 17 C -0.05 0.07 2.85 36.00 0.10 0.18 16 18 O -0.53 -0.06 12.79 -35.23 -0.45 -0.51 16 19 Si 0.68 -1.32 29.87 -169.99 -5.08 -6.40 16 20 C 0.22 0.17 10.92 -17.22 -0.19 -0.02 16 21 N -0.57 -1.36 10.46 -13.93 -0.15 -1.51 16 22 C -0.13 0.31 5.39 -26.73 -0.14 0.16 16 23 C -0.10 0.12 4.49 -26.73 -0.12 0.00 16 24 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 28 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 29 H 0.08 -0.15 8.11 -51.93 -0.42 -0.57 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 31 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 33 H 0.41 -0.51 8.72 -40.82 -0.36 -0.87 16 34 H 0.17 -0.39 5.04 -52.49 -0.26 -0.66 16 35 H 0.12 -0.27 7.96 -51.93 -0.41 -0.69 16 36 H 0.38 -0.90 8.70 45.56 0.40 -0.50 16 37 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 38 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 39 H 0.17 -0.15 8.06 -52.49 -0.42 -0.57 16 40 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 42 H 0.08 -0.01 8.10 -51.93 -0.42 -0.43 16 43 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 LS Contribution 354.28 15.07 5.34 5.34 Total: 0.00 -7.36 354.28 -11.62 -18.98 By element: Atomic # 1 Polarization: -4.19 SS G_CDS: -6.56 Total: -10.75 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: -3.62 Total: -0.34 kcal Atomic # 7 Polarization: -2.21 SS G_CDS: -0.57 Total: -2.77 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -1.14 Total: -4.06 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.08 Total: -6.40 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -7.36 -11.62 -18.98 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14589460_12175864.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.591 kcal (2) G-P(sol) polarization free energy of solvation -7.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.950 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.981 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.572 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds