Wall clock time and date at job start Mon Mar 8 2021 04:39:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45200 * 109.47003 * 2 1 4 4 C 1.34222 * 117.00098 * 180.02562 * 3 2 1 5 5 O 1.20822 * 120.00130 * 359.97438 * 4 3 2 6 6 C 1.50703 * 119.99989 * 180.02562 * 4 3 2 7 7 H 1.08994 * 109.47313 * 59.99805 * 6 4 3 8 8 C 1.53005 * 109.47031 * 179.97438 * 6 4 3 9 9 C 1.53000 * 109.47148 * 179.97438 * 8 6 4 10 10 C 1.53007 * 109.46890 * 300.00302 * 9 8 6 11 11 H 1.08997 * 109.47019 * 299.99428 * 10 9 8 12 12 N 1.46500 * 109.46749 * 179.97438 * 10 9 8 13 13 C 1.38616 * 120.00055 * 154.99987 * 12 10 9 14 14 N 1.29684 * 124.94564 * 0.02590 * 13 12 10 15 15 C 1.32118 * 116.86540 * 179.97438 * 14 13 12 16 16 C 1.33329 * 114.58007 * 359.97438 * 15 14 13 17 17 C 1.50705 * 125.95221 * 180.02562 * 16 15 14 18 18 O 1.42893 * 109.46648 * 299.99782 * 17 16 15 19 19 Si 1.86295 * 109.46957 * 179.97438 * 17 16 15 20 20 S 1.70960 * 124.95020 * 179.72284 * 13 12 10 21 21 C 1.52995 * 109.47159 * 60.00113 * 10 9 8 22 22 C 1.52996 * 109.47096 * 299.99621 * 6 4 3 23 23 H 1.09001 * 109.47002 * 179.97438 * 1 2 3 24 24 H 1.08993 * 109.46955 * 300.00258 * 1 2 3 25 25 H 1.09000 * 109.47050 * 60.00087 * 1 2 3 26 26 H 1.09000 * 109.47050 * 119.99913 * 2 1 3 27 27 H 1.09001 * 109.46801 * 240.00026 * 2 1 3 28 28 H 1.08998 * 109.47391 * 299.99865 * 8 6 4 29 29 H 1.09003 * 109.46727 * 60.00253 * 8 6 4 30 30 H 1.09003 * 109.47242 * 59.99663 * 9 8 6 31 31 H 1.08999 * 109.47195 * 180.02562 * 9 8 6 32 32 H 0.97001 * 120.00362 * 335.00454 * 12 10 9 33 33 H 1.08000 * 122.71248 * 180.02562 * 15 14 13 34 34 H 1.09000 * 109.46985 * 59.99487 * 17 16 15 35 35 H 0.96705 * 114.00311 * 299.99432 * 18 17 16 36 36 H 1.48497 * 109.99951 * 179.97438 * 19 17 16 37 37 H 1.48503 * 110.00296 * 301.31875 * 19 17 16 38 38 H 1.09003 * 109.47658 * 60.00219 * 21 10 9 39 39 H 1.09003 * 109.47026 * 179.97438 * 21 10 9 40 40 H 1.09003 * 109.47498 * 300.00259 * 22 6 4 41 41 H 1.08999 * 109.47410 * 59.99899 * 22 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.5851 3.4691 0.8904 8 6 5.4486 2.8575 -0.0001 9 6 6.0334 4.2713 -0.0002 10 6 5.5616 5.0182 -1.2495 11 1 5.8975 4.4861 -2.1394 12 7 6.1210 6.3722 -1.2492 13 6 6.2891 7.0529 -2.4450 14 7 5.9844 6.5848 -3.6154 15 6 6.2115 7.3729 -4.6512 16 6 6.7312 8.5608 -4.3408 17 6 7.0887 9.6524 -5.3165 18 8 8.0676 9.1664 -6.2371 19 14 7.7789 11.1130 -4.3887 20 16 6.9214 8.6345 -2.5910 21 6 4.0337 5.0983 -1.2492 22 6 3.4485 3.6851 -1.2486 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 1.8934 -0.5138 0.8900 27 1 1.8933 -0.5138 -0.8900 28 1 5.7847 2.3250 0.8896 29 1 5.7844 2.3257 -0.8904 30 1 5.6974 4.8035 0.8898 31 1 7.1219 4.2143 -0.0008 32 1 6.3739 6.7924 -0.4123 33 1 5.9930 7.0789 -5.6672 34 1 6.1963 9.9580 -5.8627 35 1 8.8903 8.8762 -5.8197 36 1 8.1359 12.1961 -5.3397 37 1 6.7817 11.6077 -3.4057 38 1 3.6978 5.6305 -0.3592 39 1 3.6976 5.6308 -2.1390 40 1 3.7841 3.1535 -2.1391 41 1 2.3600 3.7421 -1.2481 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14589460_15704118.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:39:21 Heat of formation + Delta-G solvation = -79.922567 kcal Electronic energy + Delta-G solvation = -23580.748106 eV Core-core repulsion = 19974.596498 eV Total energy + Delta-G solvation = -3606.151609 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.118 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.74997 -40.79898 -39.59401 -37.91377 -37.54315 -35.95652 -32.85389 -31.98346 -31.76352 -30.51250 -26.73643 -25.57267 -24.40600 -23.92819 -23.50574 -22.10301 -21.09690 -20.62087 -19.63289 -18.63402 -18.15805 -17.60108 -17.55915 -17.03098 -16.59825 -16.27570 -15.83857 -15.75325 -15.47818 -15.18234 -14.92418 -14.86004 -14.50993 -14.24143 -13.96945 -13.86769 -13.61943 -13.37358 -12.93746 -12.91113 -12.70509 -12.53992 -12.48972 -12.33689 -12.30885 -12.00180 -11.86746 -11.54640 -11.48364 -11.22748 -11.03945 -10.75777 -10.22318 -10.13014 -8.73834 -5.12552 -0.00717 0.04482 0.70899 1.22862 1.27271 1.59094 1.65281 1.91493 2.05815 2.11297 3.40383 3.44863 3.47988 3.53571 3.70299 3.84192 3.95216 3.95844 3.97389 4.00327 4.11374 4.17833 4.24009 4.29268 4.31165 4.49128 4.55717 4.62540 4.72986 4.76290 4.79979 4.82740 4.90259 4.98673 5.00762 5.04232 5.09540 5.14735 5.27184 5.50022 5.84020 6.05269 6.53638 6.78045 7.02819 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.099 4.099 9 C -0.126 4.126 10 C 0.157 3.843 11 H 0.094 0.906 12 N -0.690 5.690 13 C 0.328 3.672 14 N -0.550 5.550 15 C 0.120 3.880 16 C -0.308 4.308 17 C -0.010 4.010 18 O -0.537 6.537 19 Si 0.655 3.345 20 S 0.085 5.915 21 C -0.127 4.127 22 C -0.107 4.107 23 H 0.081 0.919 24 H 0.067 0.933 25 H 0.067 0.933 26 H 0.070 0.930 27 H 0.071 0.929 28 H 0.080 0.920 29 H 0.078 0.922 30 H 0.073 0.927 31 H 0.079 0.921 32 H 0.414 0.586 33 H 0.175 0.825 34 H 0.121 0.879 35 H 0.380 0.620 36 H -0.236 1.236 37 H -0.241 1.241 38 H 0.068 0.932 39 H 0.076 0.924 40 H 0.072 0.928 41 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.130 1.066 3.581 3.739 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.138 4.138 9 C -0.164 4.164 10 C 0.051 3.949 11 H 0.112 0.888 12 N -0.328 5.328 13 C -0.042 4.042 14 N -0.275 5.275 15 C -0.031 4.031 16 C -0.430 4.430 17 C -0.124 4.124 18 O -0.342 6.342 19 Si 0.555 3.445 20 S 0.334 5.666 21 C -0.166 4.166 22 C -0.145 4.145 23 H 0.100 0.900 24 H 0.086 0.914 25 H 0.086 0.914 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.099 0.901 29 H 0.096 0.904 30 H 0.091 0.909 31 H 0.097 0.903 32 H 0.251 0.749 33 H 0.192 0.808 34 H 0.138 0.862 35 H 0.227 0.773 36 H -0.159 1.159 37 H -0.165 1.165 38 H 0.086 0.914 39 H 0.095 0.905 40 H 0.091 0.909 41 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.154 1.804 4.003 4.394 hybrid contribution -0.632 -0.677 -0.657 1.135 sum -0.786 1.127 3.347 3.618 Atomic orbital electron populations 1.21821 0.92355 1.03250 1.03640 1.23077 0.95581 0.79900 1.02728 1.86503 1.24445 1.32697 1.83775 1.23731 0.80681 0.92609 0.72199 1.90687 1.60455 1.43162 1.45006 1.21177 0.96692 0.89835 1.02285 0.87127 1.21381 0.91527 0.96339 1.04516 1.21831 1.01634 0.95543 0.97442 1.21110 0.92923 0.81114 0.99770 0.88809 1.44153 1.68813 1.16401 1.03448 1.23738 0.96692 0.93227 0.90592 1.66489 1.28536 1.35809 0.96656 1.21326 0.95093 0.88605 0.98094 1.25570 1.18944 1.03478 0.95057 1.24104 0.95042 1.00299 0.92978 1.86510 1.27713 1.85492 1.34533 0.94969 0.88302 0.78832 0.82372 1.83987 1.64498 1.13310 1.04814 1.21937 0.94967 0.96453 1.03282 1.21476 1.01702 0.95296 0.96053 0.90026 0.91389 0.91366 0.91135 0.91108 0.90130 0.90364 0.90869 0.90250 0.74923 0.80768 0.86189 0.77260 1.15936 1.16534 0.91356 0.90513 0.90890 0.89996 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.62 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.57 10.12 -39.24 -0.40 -0.97 16 4 C 0.47 0.87 7.25 36.01 0.26 1.13 16 5 O -0.51 -2.42 15.73 -18.75 -0.29 -2.71 16 6 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 8 C -0.10 0.14 4.49 -26.73 -0.12 0.02 16 9 C -0.13 0.37 5.39 -26.73 -0.14 0.23 16 10 C 0.16 -0.24 2.59 -67.93 -0.18 -0.42 16 11 H 0.09 0.04 7.77 -51.93 -0.40 -0.36 16 12 N -0.69 1.04 5.23 -55.78 -0.29 0.74 16 13 C 0.33 0.25 8.06 -87.68 -0.71 -0.46 16 14 N -0.55 -1.38 9.90 -15.21 -0.15 -1.53 16 15 C 0.12 0.21 11.22 -19.14 -0.21 -0.01 16 16 C -0.31 -0.19 5.74 -36.02 -0.21 -0.39 16 17 C -0.01 0.00 2.99 36.01 0.11 0.11 16 18 O -0.54 -0.12 12.87 -35.23 -0.45 -0.58 16 19 Si 0.66 -0.45 31.05 -169.99 -5.28 -5.73 16 20 S 0.08 -0.02 20.57 -107.50 -2.21 -2.24 16 21 C -0.13 0.19 5.50 -26.76 -0.15 0.04 16 22 C -0.11 0.14 5.13 -26.76 -0.14 0.01 16 23 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 24 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 27 H 0.07 0.04 8.13 -51.93 -0.42 -0.39 16 28 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 29 H 0.08 -0.01 8.10 -51.93 -0.42 -0.43 16 30 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.41 -1.51 8.73 -40.82 -0.36 -1.87 16 33 H 0.18 0.14 8.06 -52.49 -0.42 -0.29 16 34 H 0.12 0.00 7.96 -51.93 -0.41 -0.41 16 35 H 0.38 -1.27 8.70 45.56 0.40 -0.88 16 36 H -0.24 -0.46 7.11 56.52 0.40 -0.06 16 37 H -0.24 -0.36 7.11 56.52 0.40 0.04 16 38 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 41 H 0.08 -0.11 8.11 -51.93 -0.42 -0.53 16 LS Contribution 352.25 15.07 5.31 5.31 Total: 0.00 -6.80 352.25 -11.19 -17.99 By element: Atomic # 1 Polarization: -4.95 SS G_CDS: -6.31 Total: -11.26 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -1.11 Total: 0.97 kcal Atomic # 7 Polarization: -0.35 SS G_CDS: -0.44 Total: -0.79 kcal Atomic # 8 Polarization: -3.11 SS G_CDS: -1.15 Total: -4.26 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.28 Total: -5.73 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.21 Total: -2.24 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -6.80 -11.19 -17.99 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14589460_15704118.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.931 kcal (2) G-P(sol) polarization free energy of solvation -6.800 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.731 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.991 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds