Wall clock time and date at job start Mon Mar 8 2021 04:39:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45206 * 109.46791 * 2 1 4 4 C 1.34227 * 116.99732 * 179.97438 * 3 2 1 5 5 O 1.20827 * 120.00160 * 0.02562 * 4 3 2 6 6 C 1.50702 * 120.00100 * 180.02562 * 4 3 2 7 7 H 1.08995 * 109.46922 * 60.00191 * 6 4 3 8 8 C 1.52997 * 109.47467 * 180.02562 * 6 4 3 9 9 C 1.53003 * 109.47241 * 179.97438 * 8 6 4 10 10 C 1.52999 * 109.47087 * 300.00042 * 9 8 6 11 11 H 1.09004 * 109.47434 * 300.00074 * 10 9 8 12 12 N 1.46498 * 109.46963 * 179.97438 * 10 9 8 13 13 C 1.39145 * 119.99604 * 154.72478 * 12 10 9 14 14 N 1.32333 * 119.72042 * 0.02562 * 13 12 10 15 15 C 1.32011 * 121.64547 * 179.75535 * 14 13 12 16 16 C 1.37988 * 120.90209 * 0.52319 * 15 14 13 17 17 C 1.50701 * 120.32771 * 179.76802 * 16 15 14 18 18 O 1.42897 * 109.47110 * 119.97699 * 17 16 15 19 19 Si 1.86300 * 109.46984 * 359.97438 * 17 16 15 20 20 C 1.38907 * 119.34674 * 359.74783 * 16 15 14 21 21 C 1.38446 * 118.48086 * 359.97438 * 20 16 15 22 22 F 1.35101 * 120.46842 * 179.97438 * 21 20 16 23 23 C 1.52997 * 109.47114 * 59.99880 * 10 9 8 24 24 C 1.52999 * 109.46867 * 300.00294 * 6 4 3 25 25 H 1.09006 * 109.46657 * 179.97438 * 1 2 3 26 26 H 1.08999 * 109.47103 * 300.00027 * 1 2 3 27 27 H 1.09000 * 109.47004 * 60.00275 * 1 2 3 28 28 H 1.08996 * 109.47809 * 239.99778 * 2 1 3 29 29 H 1.09000 * 109.47004 * 119.99725 * 2 1 3 30 30 H 1.09004 * 109.46812 * 60.00081 * 8 6 4 31 31 H 1.08997 * 109.47293 * 299.99977 * 8 6 4 32 32 H 1.08997 * 109.46962 * 180.02562 * 9 8 6 33 33 H 1.08995 * 109.46928 * 60.00077 * 9 8 6 34 34 H 0.97001 * 120.00384 * 335.00737 * 12 10 9 35 35 H 1.08005 * 119.55263 * 180.26965 * 15 14 13 36 36 H 1.09000 * 109.46729 * 239.97928 * 17 16 15 37 37 H 0.96697 * 113.99990 * 300.00427 * 18 17 16 38 38 H 1.48495 * 109.99784 * 179.97438 * 19 17 16 39 39 H 1.48499 * 110.00193 * 301.31743 * 19 17 16 40 40 H 1.07993 * 120.75993 * 180.02562 * 20 16 15 41 41 H 1.09009 * 109.47238 * 59.99946 * 23 10 9 42 42 H 1.08997 * 109.47293 * 179.97438 * 23 10 9 43 43 H 1.08995 * 109.47266 * 299.99687 * 24 6 4 44 44 H 1.09000 * 109.47204 * 59.99745 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9375 0.0012 7 1 3.5844 3.4693 0.8912 8 6 5.4485 2.8575 0.0010 9 6 6.0333 4.2714 0.0010 10 6 5.5616 5.0184 -1.2482 11 1 5.8975 4.4863 -2.1382 12 7 6.1210 6.3723 -1.2478 13 6 6.2951 7.0534 -2.4487 14 7 5.9530 6.4729 -3.5876 15 6 6.0972 7.0857 -4.7480 16 6 6.6239 8.3593 -4.8161 17 6 6.7877 9.0447 -6.1482 18 8 6.0217 10.2510 -6.1606 19 14 6.1909 7.9161 -7.5049 20 6 7.0013 9.0035 -3.6448 21 6 6.8332 8.3387 -2.4421 22 9 7.1871 8.9273 -1.2787 23 6 4.0337 5.0983 -1.2480 24 6 3.4495 3.6848 -1.2480 25 1 -0.3633 -1.0278 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 1.8934 -0.5138 -0.8899 29 1 1.8933 -0.5138 0.8900 30 1 5.7844 2.3258 -0.8893 31 1 5.7846 2.3250 0.8907 32 1 7.1218 4.2144 0.0005 33 1 5.6974 4.8035 0.8910 34 1 6.3739 6.7925 -0.4109 35 1 5.8028 6.5818 -5.6568 36 1 7.8398 9.2807 -6.3084 37 1 5.0740 10.1165 -6.0234 38 1 6.3465 8.5807 -8.8237 39 1 6.9583 6.6449 -7.4825 40 1 7.4156 10.0005 -3.6716 41 1 3.6978 5.6305 -0.3580 42 1 3.6977 5.6309 -2.1377 43 1 3.7857 3.1530 -2.1380 44 1 2.3610 3.7418 -1.2484 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14589460_17656566.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:39:27 Heat of formation + Delta-G solvation = -131.689125 kcal Electronic energy + Delta-G solvation = -27632.065965 eV Core-core repulsion = 23465.063368 eV Total energy + Delta-G solvation = -4167.002597 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.152 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -49.86007 -41.77358 -41.38996 -39.70248 -38.04205 -37.54003 -36.03530 -33.31421 -32.86105 -32.12970 -31.90268 -30.18304 -26.67384 -25.60676 -24.64175 -23.83544 -23.53088 -22.81861 -21.82427 -21.00151 -19.31077 -18.64212 -18.48295 -18.31422 -17.65498 -17.54893 -17.45938 -16.94333 -16.46425 -16.10958 -15.99715 -15.68202 -15.41639 -15.36679 -14.92656 -14.73189 -14.47286 -14.35838 -14.22003 -14.02137 -13.79865 -13.60091 -13.45945 -13.34498 -12.92715 -12.74940 -12.60836 -12.48807 -12.46938 -12.28944 -12.08020 -11.88808 -11.53413 -11.47318 -11.21303 -11.13008 -10.66833 -10.64935 -10.46174 -8.76737 -5.10118 -0.06544 0.12750 1.21713 1.23705 1.56737 1.65314 1.92379 1.94143 2.56104 3.04591 3.24219 3.39921 3.44853 3.51319 3.57937 3.59760 3.83332 3.87959 3.96147 3.97685 3.99927 4.01800 4.12857 4.21403 4.27488 4.29615 4.33948 4.40599 4.44042 4.62063 4.65066 4.71075 4.74775 4.80266 4.86559 4.93513 4.97470 5.00417 5.02003 5.05450 5.16544 5.22859 5.41473 5.50775 5.95054 6.17109 6.51377 6.78858 6.95476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.099 4.099 9 C -0.128 4.128 10 C 0.154 3.846 11 H 0.095 0.905 12 N -0.714 5.714 13 C 0.392 3.608 14 N -0.511 5.511 15 C 0.147 3.853 16 C -0.210 4.210 17 C -0.055 4.055 18 O -0.541 6.541 19 Si 0.686 3.314 20 C -0.038 4.038 21 C -0.021 4.021 22 F -0.134 7.134 23 C -0.126 4.126 24 C -0.107 4.107 25 H 0.081 0.919 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.077 0.923 31 H 0.079 0.921 32 H 0.077 0.923 33 H 0.072 0.928 34 H 0.412 0.588 35 H 0.162 0.838 36 H 0.115 0.885 37 H 0.380 0.620 38 H -0.252 1.252 39 H -0.254 1.254 40 H 0.149 0.851 41 H 0.067 0.933 42 H 0.077 0.923 43 H 0.073 0.927 44 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.016 -0.024 0.201 4.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.394 6.394 6 C -0.100 4.100 7 H 0.128 0.872 8 C -0.137 4.137 9 C -0.166 4.166 10 C 0.049 3.951 11 H 0.113 0.887 12 N -0.346 5.346 13 C 0.154 3.846 14 N -0.228 5.228 15 C -0.010 4.010 16 C -0.216 4.216 17 C -0.166 4.166 18 O -0.346 6.346 19 Si 0.587 3.413 20 C -0.064 4.064 21 C -0.047 4.047 22 F -0.113 7.113 23 C -0.165 4.165 24 C -0.145 4.145 25 H 0.100 0.900 26 H 0.086 0.914 27 H 0.087 0.913 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.096 0.904 31 H 0.097 0.903 32 H 0.096 0.904 33 H 0.090 0.910 34 H 0.249 0.751 35 H 0.179 0.821 36 H 0.133 0.867 37 H 0.227 0.773 38 H -0.176 1.176 39 H -0.179 1.179 40 H 0.167 0.833 41 H 0.085 0.915 42 H 0.096 0.904 43 H 0.091 0.909 44 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -3.427 -1.539 -0.566 3.799 hybrid contribution 1.030 1.132 1.010 1.833 sum -2.397 -0.407 0.444 2.472 Atomic orbital electron populations 1.21820 0.92351 1.03238 1.03647 1.23074 0.95581 0.79921 1.02715 1.86506 1.24444 1.32668 1.83785 1.23746 0.80669 0.92619 0.72176 1.90688 1.60464 1.43177 1.45025 1.21178 0.96673 0.89807 1.02347 0.87157 1.21376 0.91546 0.96379 1.04427 1.21833 1.01535 0.95542 0.97664 1.21040 0.92918 0.81539 0.99590 0.88718 1.44669 1.68384 1.16808 1.04713 1.18424 0.91224 0.87057 0.87930 1.67301 1.22718 1.35989 0.96759 1.22344 0.92909 0.90953 0.94787 1.20928 1.07186 0.96975 0.96494 1.24853 0.99506 0.92946 0.99316 1.86509 1.23165 1.29580 1.95324 0.94840 0.90875 0.77862 0.77710 1.21273 0.95233 1.00237 0.89644 1.18012 1.10437 0.93254 0.83038 1.91493 1.90364 1.83641 1.45772 1.21931 0.94998 0.96348 1.03240 1.21479 1.01677 0.95349 0.95992 0.90048 0.91389 0.91345 0.91113 0.91167 0.90404 0.90250 0.90441 0.90959 0.75129 0.82096 0.86732 0.77297 1.17621 1.17867 0.83336 0.91457 0.90448 0.90862 0.90007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.50 10.12 -39.25 -0.40 -0.90 16 4 C 0.47 0.82 7.26 36.01 0.26 1.08 16 5 O -0.51 -2.39 15.73 -18.75 -0.29 -2.68 16 6 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 8 C -0.10 0.11 4.49 -26.73 -0.12 -0.01 16 9 C -0.13 0.30 5.39 -26.73 -0.14 0.15 16 10 C 0.15 -0.21 2.47 -67.93 -0.17 -0.38 16 11 H 0.09 0.01 7.53 -51.93 -0.39 -0.39 16 12 N -0.71 0.45 5.22 -53.85 -0.28 0.17 16 13 C 0.39 0.40 7.47 -154.86 -1.16 -0.75 16 14 N -0.51 -0.54 9.20 -12.36 -0.11 -0.65 16 15 C 0.15 -0.06 9.84 -17.57 -0.17 -0.24 16 16 C -0.21 0.11 5.40 -104.47 -0.56 -0.45 16 17 C -0.05 0.07 2.84 36.01 0.10 0.17 16 18 O -0.54 0.38 12.78 -35.23 -0.45 -0.07 16 19 Si 0.69 -1.42 29.82 -169.99 -5.07 -6.49 16 20 C -0.04 -0.02 9.75 -39.26 -0.38 -0.40 16 21 C -0.02 -0.03 7.35 -39.09 -0.29 -0.31 16 22 F -0.13 -0.26 16.65 2.25 0.04 -0.22 16 23 C -0.13 0.23 5.51 -26.76 -0.15 0.08 16 24 C -0.11 0.19 5.13 -26.76 -0.14 0.05 16 25 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 29 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 30 H 0.08 -0.01 8.10 -51.93 -0.42 -0.43 16 31 H 0.08 -0.04 8.10 -51.93 -0.42 -0.47 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 34 H 0.41 -0.67 8.07 -40.82 -0.33 -1.00 16 35 H 0.16 -0.42 4.88 -52.48 -0.26 -0.67 16 36 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 37 H 0.38 -1.71 8.70 45.56 0.40 -1.31 16 38 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 39 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 40 H 0.15 -0.04 8.06 -52.49 -0.42 -0.46 16 41 H 0.07 -0.14 8.14 -51.92 -0.42 -0.56 16 42 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.08 -0.15 8.11 -51.93 -0.42 -0.57 16 LS Contribution 364.79 15.07 5.50 5.50 Total: 0.00 -6.87 364.79 -10.14 -17.01 By element: Atomic # 1 Polarization: -4.87 SS G_CDS: -6.53 Total: -11.39 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -2.55 Total: -0.27 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.39 Total: -0.48 kcal Atomic # 8 Polarization: -2.51 SS G_CDS: -1.14 Total: -3.65 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.04 Total: -0.22 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.07 Total: -6.49 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -6.87 -10.14 -17.01 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14589460_17656566.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.676 kcal (2) G-P(sol) polarization free energy of solvation -6.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.689 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds