Wall clock time and date at job start Mon Mar 8 2021 06:34:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50699 * 109.46972 * 119.99751 * 2 1 3 5 5 C 1.38607 * 120.71936 * 244.72450 * 4 2 1 6 6 N 1.32279 * 119.19597 * 179.71715 * 5 4 2 7 7 C 1.32496 * 120.73910 * 0.56466 * 6 5 4 8 8 N 1.38406 * 119.21774 * 179.72375 * 7 6 5 9 9 C 1.46497 * 120.00093 * 359.97438 * 8 7 6 10 10 H 1.09003 * 112.84835 * 336.19525 * 9 8 7 11 11 C 1.53782 * 113.61512 * 107.49468 * 9 8 7 12 12 C 1.53783 * 87.07992 * 139.98308 * 11 9 8 13 13 H 1.08999 * 113.61048 * 89.12130 * 12 11 9 14 14 C 1.52998 * 113.69251 * 220.00989 * 12 11 9 15 15 N 1.46501 * 109.47493 * 272.53823 * 14 12 11 16 16 C 1.34425 * 126.82704 * 124.99471 * 15 14 12 17 17 N 1.30827 * 108.08040 * 179.97438 * 16 15 14 18 18 C 1.33244 * 109.82872 * 0.02562 * 17 16 15 19 19 N 1.30713 * 108.94235 * 359.75206 * 18 17 16 20 20 C 1.53777 * 87.08238 * 334.57000 * 12 11 9 21 21 N 1.32492 * 121.56625 * 359.70895 * 7 6 5 22 22 C 1.32279 * 120.74224 * 359.97438 * 21 7 6 23 23 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 24 24 H 1.09000 * 109.47187 * 239.99852 * 2 1 3 25 25 H 1.48504 * 110.00018 * 298.67819 * 3 2 1 26 26 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 27 27 H 1.07995 * 120.40325 * 0.02562 * 5 4 2 28 28 H 0.96995 * 119.99880 * 179.97438 * 8 7 6 29 29 H 1.09001 * 113.62086 * 254.53354 * 11 9 8 30 30 H 1.09007 * 113.61323 * 25.44011 * 11 9 8 31 31 H 1.09006 * 109.47333 * 32.53529 * 14 12 11 32 32 H 1.09001 * 109.47480 * 152.53465 * 14 12 11 33 33 H 1.07997 * 125.96118 * 0.02562 * 16 15 14 34 34 H 1.08002 * 125.52703 * 179.97438 * 18 17 16 35 35 H 1.09009 * 113.61521 * 270.88624 * 20 12 11 36 36 H 1.09003 * 113.61729 * 139.98047 * 20 12 11 37 37 H 1.07997 * 120.40149 * 180.02562 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6470 -0.0262 2.2005 6 7 3.0687 -0.6783 3.2713 7 6 2.8235 -1.9722 3.4165 8 7 3.2845 -2.6245 4.5468 9 6 4.0343 -1.8847 5.5650 10 1 4.5155 -0.9901 5.1695 11 6 3.2390 -1.6382 6.8579 12 6 4.5401 -1.9361 7.6217 13 1 5.1591 -1.0548 7.7899 14 6 4.3322 -2.7667 8.8897 15 7 4.0411 -1.8754 10.0153 16 6 2.9740 -1.9296 10.8310 17 7 3.0826 -0.9634 11.7064 18 6 4.2005 -0.2739 11.4822 19 7 4.8241 -0.7975 10.4596 20 6 4.9721 -2.7691 6.4035 21 7 2.1473 -2.6565 2.5055 22 6 1.6922 -2.0632 1.4143 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5139 -0.8900 25 1 1.5879 2.4585 -1.2243 26 1 1.5614 2.4679 1.2084 27 1 2.8535 1.0276 2.0858 28 1 3.1111 -3.5715 4.6648 29 1 2.8931 -0.6105 6.9687 30 1 2.4521 -2.3719 7.0331 31 1 3.4965 -3.4511 8.7428 32 1 5.2361 -3.3375 9.1025 33 1 2.1681 -2.6462 10.7742 34 1 4.5385 0.5771 12.0548 35 1 4.6589 -3.8120 6.4544 36 1 6.0254 -2.6544 6.1473 37 1 1.1413 -2.6262 0.6755 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14643980_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:34:15 Heat of formation + Delta-G solvation = 156.591247 kcal Electronic energy + Delta-G solvation = -21787.196217 eV Core-core repulsion = 18376.894448 eV Total energy + Delta-G solvation = -3410.301768 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.128 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.96856 -42.07665 -40.51678 -38.12580 -36.18081 -34.72307 -34.48691 -32.25404 -32.09657 -29.13769 -26.96639 -26.67072 -25.89216 -24.27934 -23.03393 -22.94255 -22.20102 -20.83346 -19.29510 -18.85767 -18.55887 -18.23091 -16.96564 -16.75371 -16.46760 -16.38021 -16.06713 -15.73870 -15.66532 -15.34592 -15.09863 -14.64214 -14.58151 -13.99511 -13.83443 -13.68521 -13.46354 -13.32890 -12.83167 -12.47011 -12.23673 -12.01412 -11.81114 -11.80274 -11.66059 -11.20515 -10.89811 -10.72515 -10.70013 -10.55016 -9.99322 -9.10599 -5.06423 0.07873 0.18579 0.70628 1.18144 1.32584 1.49857 1.80112 1.86731 2.08435 2.76088 3.12219 3.19606 3.28167 3.31063 3.34687 3.42967 3.59641 3.64162 3.73913 3.80548 3.84443 3.95794 4.02401 4.10762 4.22890 4.35034 4.44469 4.45394 4.57740 4.64592 4.75375 4.85371 4.86525 5.07125 5.30461 5.32841 5.51477 5.78236 5.84416 6.00649 6.33762 6.42171 7.17120 7.30126 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.054 4.054 3 Si 0.676 3.324 4 C -0.245 4.245 5 C 0.201 3.799 6 N -0.561 5.561 7 C 0.567 3.433 8 N -0.685 5.685 9 C 0.143 3.857 10 H 0.123 0.877 11 C -0.149 4.149 12 C -0.120 4.120 13 H 0.111 0.889 14 C 0.141 3.859 15 N -0.377 5.377 16 C 0.253 3.747 17 N -0.547 5.547 18 C 0.198 3.802 19 N -0.317 5.317 20 C -0.138 4.138 21 N -0.570 5.570 22 C 0.224 3.776 23 H 0.381 0.619 24 H 0.078 0.922 25 H -0.257 1.257 26 H -0.252 1.252 27 H 0.167 0.833 28 H 0.414 0.586 29 H 0.074 0.926 30 H 0.086 0.914 31 H 0.103 0.897 32 H 0.093 0.907 33 H 0.217 0.783 34 H 0.217 0.783 35 H 0.091 0.909 36 H 0.084 0.916 37 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.910 -2.100 -3.752 4.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.165 4.165 3 Si 0.577 3.423 4 C -0.253 4.253 5 C 0.033 3.967 6 N -0.283 5.283 7 C 0.210 3.790 8 N -0.320 5.320 9 C 0.037 3.963 10 H 0.141 0.859 11 C -0.189 4.189 12 C -0.140 4.140 13 H 0.129 0.871 14 C 0.019 3.981 15 N -0.168 5.168 16 C -0.044 4.044 17 N -0.274 5.274 18 C -0.104 4.104 19 N -0.145 5.145 20 C -0.177 4.177 21 N -0.291 5.291 22 C 0.056 3.944 23 H 0.230 0.770 24 H 0.096 0.904 25 H -0.181 1.181 26 H -0.177 1.177 27 H 0.184 0.816 28 H 0.252 0.748 29 H 0.092 0.908 30 H 0.104 0.896 31 H 0.121 0.879 32 H 0.111 0.889 33 H 0.233 0.767 34 H 0.233 0.767 35 H 0.110 0.890 36 H 0.103 0.897 37 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 2.705 -1.679 -2.303 3.930 hybrid contribution -1.743 -0.287 -1.325 2.208 sum 0.963 -1.966 -3.628 4.238 Atomic orbital electron populations 1.86592 1.17882 1.80111 1.49943 1.24403 0.84314 1.10552 0.97252 0.95256 0.91500 0.74728 0.80858 1.20614 1.07770 0.96868 1.00067 1.22776 0.88434 0.99286 0.86168 1.67919 1.27400 1.08286 1.24700 1.19426 0.87071 0.85603 0.86877 1.44162 1.58239 1.11851 1.17792 1.22476 0.92199 0.96312 0.85345 0.85903 1.23639 0.96640 1.03064 0.95519 1.22682 0.99173 1.00163 0.91939 0.87121 1.21873 1.03554 0.90148 0.82551 1.50557 1.17056 1.24157 1.25038 1.26091 0.92451 0.97931 0.87912 1.70564 1.21428 1.08511 1.26928 1.26056 0.89949 1.00081 0.94351 1.78029 1.18666 1.01482 1.16340 1.23410 1.00856 0.99291 0.94098 1.67982 1.16640 1.40077 1.04403 1.22807 0.88982 0.91041 0.91617 0.77039 0.90360 1.18130 1.17697 0.81645 0.74772 0.90754 0.89574 0.87922 0.88875 0.76660 0.76670 0.89024 0.89726 0.81367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.06 12.82 -35.23 -0.45 -0.51 16 2 C -0.05 0.06 2.82 36.01 0.10 0.17 16 3 Si 0.68 -1.25 29.91 -169.99 -5.08 -6.34 16 4 C -0.25 -0.20 5.40 -104.35 -0.56 -0.76 16 5 C 0.20 0.24 9.92 -17.22 -0.17 0.07 16 6 N -0.56 -1.47 9.13 -13.93 -0.13 -1.60 16 7 C 0.57 1.42 8.43 -322.81 -2.72 -1.30 16 8 N -0.69 0.14 5.50 -55.00 -0.30 -0.16 16 9 C 0.14 -0.21 4.25 -67.12 -0.29 -0.49 16 10 H 0.12 -0.01 7.37 -51.93 -0.38 -0.39 16 11 C -0.15 0.25 7.43 -25.92 -0.19 0.06 16 12 C -0.12 0.31 3.88 -89.81 -0.35 -0.04 16 13 H 0.11 -0.07 8.01 -51.93 -0.42 -0.48 16 14 C 0.14 -0.43 6.39 -4.04 -0.03 -0.46 16 15 N -0.38 -0.11 3.69 -62.63 -0.23 -0.34 16 16 C 0.25 0.07 12.63 -90.66 -1.14 -1.08 16 17 N -0.55 -1.73 11.19 -15.83 -0.18 -1.91 16 18 C 0.20 0.48 13.03 -91.81 -1.20 -0.71 16 19 N -0.32 -0.90 12.46 29.29 0.36 -0.53 16 20 C -0.14 0.50 7.39 -25.92 -0.19 0.30 16 21 N -0.57 -1.64 10.46 -13.93 -0.15 -1.79 16 22 C 0.22 0.33 10.99 -17.22 -0.19 0.15 16 23 H 0.38 -1.46 8.74 45.56 0.40 -1.06 16 24 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 25 H -0.26 -0.05 7.11 56.52 0.40 0.36 16 26 H -0.25 -0.33 7.07 56.52 0.40 0.07 16 27 H 0.17 -0.18 5.04 -52.49 -0.26 -0.45 16 28 H 0.41 -0.68 8.84 -40.82 -0.36 -1.04 16 29 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 31 H 0.10 -0.58 7.80 -51.93 -0.40 -0.98 16 32 H 0.09 -0.32 8.14 -51.93 -0.42 -0.75 16 33 H 0.22 -0.87 8.06 -52.49 -0.42 -1.29 16 34 H 0.22 -0.14 8.06 -52.49 -0.42 -0.56 16 35 H 0.09 -0.45 8.08 -51.92 -0.42 -0.87 16 36 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 37 H 0.17 -0.11 8.06 -52.49 -0.42 -0.53 16 LS Contribution 320.22 15.07 4.83 4.83 Total: 0.00 -10.14 320.22 -12.67 -22.81 By element: Atomic # 1 Polarization: -5.95 SS G_CDS: -4.41 Total: -10.36 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: -6.93 Total: -4.10 kcal Atomic # 7 Polarization: -5.71 SS G_CDS: -0.62 Total: -6.33 kcal Atomic # 8 Polarization: -0.06 SS G_CDS: -0.45 Total: -0.51 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.08 Total: -6.34 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -10.14 -12.67 -22.81 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14643980_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.400 kcal (2) G-P(sol) polarization free energy of solvation -10.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 169.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.808 kcal (6) G-S(sol) free energy of system = (1) + (5) 156.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds