Wall clock time and date at job start Mon Mar 8 2021 06:34:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33325 * 125.95262 * 2 1 4 4 C 1.50705 * 122.71049 * 359.97438 * 3 2 1 5 5 O 1.42898 * 109.47113 * 113.56578 * 4 3 2 6 6 Si 1.86304 * 109.46937 * 233.56958 * 4 3 2 7 7 N 1.32124 * 114.58019 * 180.02562 * 3 2 1 8 8 C 1.29688 * 116.86302 * 359.97438 * 7 3 2 9 9 N 1.38610 * 124.94582 * 179.97438 * 8 7 3 10 10 C 1.46501 * 120.00115 * 180.02562 * 9 8 7 11 11 H 1.08997 * 112.84575 * 336.19731 * 10 9 8 12 12 C 1.53954 * 113.74444 * 107.39941 * 10 9 8 13 13 C 1.53783 * 87.01863 * 139.94569 * 12 10 9 14 14 H 1.08999 * 113.61118 * 89.23126 * 13 12 10 15 15 C 1.52995 * 113.61064 * 220.04679 * 13 12 10 16 16 N 1.46498 * 109.47607 * 274.13429 * 15 13 12 17 17 C 1.34425 * 126.82598 * 124.71025 * 16 15 13 18 18 N 1.30831 * 108.07869 * 179.90108 * 17 16 15 19 19 C 1.33237 * 109.83295 * 0.37997 * 18 17 16 20 20 N 1.30723 * 108.94279 * 359.76338 * 19 18 17 21 21 C 1.53774 * 113.61640 * 204.99984 * 10 9 8 22 22 S 1.70961 * 110.10516 * 0.24523 * 8 7 3 23 23 H 1.08998 * 109.47547 * 84.87968 * 1 2 3 24 24 H 1.09008 * 109.47202 * 204.88214 * 1 2 3 25 25 H 1.09007 * 109.47048 * 324.87326 * 1 2 3 26 26 H 1.09002 * 109.47000 * 353.56495 * 4 3 2 27 27 H 0.96703 * 113.99713 * 60.00033 * 5 4 3 28 28 H 1.48498 * 109.99694 * 180.02562 * 6 4 3 29 29 H 1.48500 * 109.99665 * 301.31425 * 6 4 3 30 30 H 0.97002 * 120.00192 * 359.97438 * 9 8 7 31 31 H 1.08999 * 113.61519 * 25.42562 * 12 10 9 32 32 H 1.09004 * 113.66742 * 254.47239 * 12 10 9 33 33 H 1.09004 * 109.47636 * 34.13924 * 15 13 12 34 34 H 1.09004 * 109.47069 * 154.14024 * 15 13 12 35 35 H 1.08004 * 125.96030 * 0.03780 * 17 16 15 36 36 H 1.07995 * 125.53397 * 179.80090 * 19 18 17 37 37 H 1.09003 * 113.61763 * 105.38098 * 21 10 9 38 38 H 1.09008 * 113.61362 * 334.48005 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4830 -0.0006 5 8 2.0694 3.1230 1.2343 6 14 2.4876 3.4406 -1.4138 7 7 3.5851 0.8187 -0.0005 8 6 3.9314 -0.4310 -0.0005 9 7 5.2384 -0.8927 -0.0015 10 6 5.5065 -2.3330 -0.0019 11 1 4.6808 -2.9172 0.4041 12 6 6.0333 -2.8651 -1.3471 13 6 6.9914 -3.7487 -0.5308 14 1 6.5728 -4.7205 -0.2690 15 6 8.3948 -3.8486 -1.1318 16 7 8.4236 -4.9208 -2.1296 17 6 8.8034 -4.8155 -3.4148 18 7 8.6876 -5.9943 -3.9703 19 6 8.2311 -6.8718 -3.0777 20 7 8.0540 -6.2618 -1.9352 21 6 6.8751 -2.7050 0.5925 22 16 2.5413 -1.4261 -0.0065 23 1 -0.3634 0.0917 -1.0235 24 1 -0.3634 -0.9323 0.4324 25 1 -0.3633 0.8406 0.5913 26 1 0.6581 2.4498 -0.1161 27 1 3.0193 3.1878 1.4036 28 1 1.9554 4.8269 -1.4250 29 1 3.9668 3.4660 -1.2850 30 1 5.9755 -0.2622 -0.0027 31 1 6.5404 -2.1096 -1.9471 32 1 5.2936 -3.4307 -1.9137 33 1 8.6548 -2.9028 -1.6072 34 1 9.1134 -4.0679 -0.3421 35 1 9.1465 -3.9152 -3.9030 36 1 8.0391 -7.9175 -3.2671 37 1 6.8141 -3.1414 1.5895 38 1 7.6129 -1.9055 0.5238 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14643980_15704122.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:34:22 Heat of formation + Delta-G solvation = 138.222846 kcal Electronic energy + Delta-G solvation = -22235.369147 eV Core-core repulsion = 18823.311403 eV Total energy + Delta-G solvation = -3412.057744 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.105 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -43.03712 -41.19025 -40.61489 -37.65771 -36.18605 -34.58769 -32.83843 -32.16670 -29.50554 -28.66507 -27.12094 -25.82969 -24.92136 -23.99263 -23.01395 -22.55945 -21.27309 -20.18325 -19.21414 -18.42498 -17.94871 -17.63597 -17.05774 -16.64048 -16.54293 -16.22925 -15.80072 -15.66352 -15.41119 -15.14152 -14.82245 -14.17910 -14.15208 -14.01891 -13.87031 -13.80086 -13.63546 -13.42847 -13.01728 -12.75598 -12.57363 -12.35171 -12.16863 -11.85741 -11.71617 -11.10069 -10.96049 -10.76763 -10.67061 -10.63133 -10.43997 -10.02308 -8.67177 -4.87198 -0.01079 0.15422 0.63607 0.75542 1.24644 1.32701 1.79771 1.82327 1.86282 2.02314 2.17873 3.01757 3.11061 3.18417 3.33163 3.36544 3.40281 3.56257 3.62507 3.81240 3.93763 4.02897 4.07883 4.19607 4.20142 4.29282 4.37828 4.43539 4.46312 4.63740 4.64247 4.66727 4.86408 4.91546 4.97993 5.20621 5.24364 5.44795 5.53700 5.77224 6.20439 6.44130 6.90844 7.10734 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C -0.241 4.241 3 C 0.073 3.927 4 C -0.036 4.036 5 O -0.526 6.526 6 Si 0.698 3.302 7 N -0.547 5.547 8 C 0.318 3.682 9 N -0.684 5.684 10 C 0.131 3.869 11 H 0.109 0.891 12 C -0.150 4.150 13 C -0.121 4.121 14 H 0.112 0.888 15 C 0.141 3.859 16 N -0.378 5.378 17 C 0.254 3.746 18 N -0.546 5.546 19 C 0.200 3.800 20 N -0.318 5.318 21 C -0.132 4.132 22 S 0.104 5.896 23 H 0.077 0.923 24 H 0.068 0.932 25 H 0.079 0.921 26 H 0.122 0.878 27 H 0.380 0.620 28 H -0.257 1.257 29 H -0.252 1.252 30 H 0.412 0.588 31 H 0.092 0.908 32 H 0.077 0.923 33 H 0.104 0.896 34 H 0.094 0.906 35 H 0.218 0.782 36 H 0.217 0.783 37 H 0.086 0.914 38 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.743 -0.778 -0.853 1.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.363 4.363 3 C -0.057 4.057 4 C -0.149 4.149 5 O -0.332 6.332 6 Si 0.597 3.403 7 N -0.273 5.273 8 C -0.054 4.054 9 N -0.323 5.323 10 C 0.025 3.975 11 H 0.127 0.873 12 C -0.189 4.189 13 C -0.140 4.140 14 H 0.130 0.870 15 C 0.019 3.981 16 N -0.169 5.169 17 C -0.043 4.043 18 N -0.273 5.273 19 C -0.103 4.103 20 N -0.146 5.146 21 C -0.171 4.171 22 S 0.353 5.647 23 H 0.096 0.904 24 H 0.087 0.913 25 H 0.098 0.902 26 H 0.140 0.860 27 H 0.228 0.772 28 H -0.182 1.182 29 H -0.176 1.176 30 H 0.251 0.749 31 H 0.110 0.890 32 H 0.096 0.904 33 H 0.122 0.878 34 H 0.112 0.888 35 H 0.234 0.766 36 H 0.234 0.766 37 H 0.105 0.895 38 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.678 -1.275 -0.664 1.590 hybrid contribution 0.823 1.236 1.076 1.834 sum 1.501 -0.040 0.412 1.557 Atomic orbital electron populations 1.20213 0.86744 1.03293 1.02986 1.25114 1.01148 0.93016 1.17061 1.19992 0.86790 0.97083 1.01813 1.24636 1.04526 0.89862 0.95843 1.86569 1.29631 1.79796 1.37197 0.94764 0.81128 0.79954 0.84413 1.66052 1.17417 1.16809 1.27034 1.23317 0.91914 0.91556 0.98588 1.43933 1.01770 1.06468 1.80172 1.22601 0.98027 0.79512 0.97409 0.87290 1.23716 0.99276 0.98900 0.97000 1.22698 0.94524 0.99818 0.96976 0.87008 1.21846 0.98294 0.87204 0.90759 1.50548 1.48455 1.07912 1.10013 1.26108 0.96477 0.98904 0.82810 1.70570 1.23312 0.99820 1.33620 1.26066 0.96958 1.01091 0.86200 1.78038 1.24117 0.88542 1.23891 1.23358 0.96156 0.98459 0.99174 1.83954 0.96525 1.10309 1.73946 0.90411 0.91282 0.90203 0.86036 0.77219 1.18158 1.17582 0.74938 0.88955 0.90408 0.87830 0.88808 0.76619 0.76644 0.89491 0.88621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.08 9.71 36.01 0.35 0.43 16 2 C -0.24 -0.30 6.57 -36.02 -0.24 -0.54 16 3 C 0.07 0.16 5.19 -84.18 -0.44 -0.28 16 4 C -0.04 -0.05 2.84 36.01 0.10 0.05 16 5 O -0.53 -1.57 12.88 -35.23 -0.45 -2.02 16 6 Si 0.70 0.58 32.62 -169.99 -5.54 -4.96 16 7 N -0.55 -1.52 9.77 -11.36 -0.11 -1.63 16 8 C 0.32 0.37 8.24 -87.68 -0.72 -0.35 16 9 N -0.68 1.06 5.52 -54.91 -0.30 0.76 16 10 C 0.13 -0.42 4.22 -67.03 -0.28 -0.71 16 11 H 0.11 -0.29 7.06 -51.93 -0.37 -0.66 16 12 C -0.15 0.53 7.45 -25.83 -0.19 0.34 16 13 C -0.12 0.48 3.86 -89.81 -0.35 0.13 16 14 H 0.11 -0.23 8.03 -51.93 -0.42 -0.65 16 15 C 0.14 -0.58 6.37 -4.05 -0.03 -0.61 16 16 N -0.38 0.28 3.69 -62.63 -0.23 0.05 16 17 C 0.25 -0.18 12.63 -90.66 -1.14 -1.32 16 18 N -0.55 -1.25 11.19 -15.83 -0.18 -1.43 16 19 C 0.20 0.32 13.03 -91.81 -1.20 -0.88 16 20 N -0.32 -0.60 12.47 29.29 0.37 -0.23 16 21 C -0.13 0.64 7.40 -25.92 -0.19 0.45 16 22 S 0.10 0.05 21.69 -107.50 -2.33 -2.28 16 23 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 24 H 0.07 -0.10 8.14 -51.92 -0.42 -0.52 16 25 H 0.08 -0.10 7.17 -51.93 -0.37 -0.47 16 26 H 0.12 -0.04 6.33 -51.93 -0.33 -0.37 16 27 H 0.38 0.46 8.70 45.56 0.40 0.86 16 28 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 29 H -0.25 -0.96 7.11 56.52 0.40 -0.56 16 30 H 0.41 -0.99 8.85 -40.82 -0.36 -1.35 16 31 H 0.09 -0.38 7.92 -51.93 -0.41 -0.79 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.10 -0.69 7.82 -51.93 -0.41 -1.10 16 34 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 35 H 0.22 -1.07 8.06 -52.48 -0.42 -1.49 16 36 H 0.22 -0.31 8.06 -52.49 -0.42 -0.73 16 37 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 38 H 0.10 -0.57 8.08 -51.92 -0.42 -0.99 16 LS Contribution 338.34 15.07 5.10 5.10 Total: 0.00 -9.19 338.34 -12.86 -22.05 By element: Atomic # 1 Polarization: -7.27 SS G_CDS: -4.84 Total: -12.11 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -4.33 Total: -3.28 kcal Atomic # 7 Polarization: -2.03 SS G_CDS: -0.46 Total: -2.48 kcal Atomic # 8 Polarization: -1.57 SS G_CDS: -0.45 Total: -2.02 kcal Atomic # 14 Polarization: 0.58 SS G_CDS: -5.54 Total: -4.96 kcal Atomic # 16 Polarization: 0.05 SS G_CDS: -2.33 Total: -2.28 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -9.19 -12.86 -22.05 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14643980_15704122.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 160.275 kcal (2) G-P(sol) polarization free energy of solvation -9.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 151.080 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.052 kcal (6) G-S(sol) free energy of system = (1) + (5) 138.223 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds