Wall clock time and date at job start Mon Mar 8 2021 06:34:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86298 * 109.46724 * 2 1 4 4 C 1.50699 * 109.47275 * 240.00011 * 2 1 3 5 5 C 1.37980 * 120.32686 * 119.97955 * 4 2 1 6 6 N 1.32010 * 120.90103 * 179.74830 * 5 4 2 7 7 C 1.32340 * 121.64402 * 0.55937 * 6 5 4 8 8 N 1.39138 * 119.71838 * 179.71478 * 7 6 5 9 9 C 1.46500 * 120.00008 * 359.72806 * 8 7 6 10 10 H 1.08996 * 112.85074 * 23.80470 * 9 8 7 11 11 C 1.53785 * 113.61546 * 155.00267 * 9 8 7 12 12 C 1.53779 * 87.08132 * 140.06593 * 11 9 8 13 13 H 1.09003 * 113.61704 * 89.19916 * 12 11 9 14 14 C 1.53004 * 113.61212 * 220.01666 * 12 11 9 15 15 N 1.46505 * 109.47120 * 184.99763 * 14 12 11 16 16 C 1.34428 * 126.82137 * 125.02328 * 15 14 12 17 17 N 1.30829 * 108.07758 * 179.97438 * 16 15 14 18 18 C 1.33239 * 109.82920 * 0.02562 * 17 16 15 19 19 N 1.30714 * 108.94945 * 359.97438 * 18 17 16 20 20 C 1.53782 * 87.08322 * 334.56532 * 12 11 9 21 21 C 1.39345 * 120.56507 * 359.43951 * 7 6 5 22 22 F 1.35096 * 120.47332 * 180.25548 * 21 7 6 23 23 C 1.38438 * 119.05344 * 0.27489 * 21 7 6 24 24 H 0.96697 * 113.99939 * 299.99673 * 1 2 3 25 25 H 1.09004 * 109.46880 * 119.99494 * 2 1 3 26 26 H 1.48500 * 109.99756 * 178.68115 * 3 2 1 27 27 H 1.48499 * 110.00157 * 299.99709 * 3 2 1 28 28 H 1.07998 * 119.54917 * 0.02562 * 5 4 2 29 29 H 0.97003 * 120.00374 * 179.73024 * 8 7 6 30 30 H 1.09001 * 113.61577 * 25.51309 * 11 9 8 31 31 H 1.09003 * 113.68394 * 254.62377 * 11 9 8 32 32 H 1.09005 * 109.46732 * 65.00193 * 14 12 11 33 33 H 1.08994 * 109.47332 * 305.00146 * 14 12 11 34 34 H 1.08003 * 125.95935 * 359.97438 * 16 15 14 35 35 H 1.08002 * 125.53210 * 179.97438 * 18 17 16 36 36 H 1.08990 * 113.61540 * 139.98295 * 20 12 11 37 37 H 1.09000 * 113.61554 * 270.88676 * 20 12 11 38 38 H 1.08006 * 120.75843 * 179.97438 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7247 -0.0462 -2.1433 6 7 3.1751 -0.6589 -3.2224 7 6 2.8781 -1.9229 -3.4781 8 7 3.3697 -2.5274 -4.6308 9 6 4.2074 -1.7633 -5.5584 10 1 4.7089 -0.9217 -5.0807 11 6 5.1454 -2.6391 -6.4058 12 6 4.8213 -1.7074 -7.5855 13 1 5.4915 -0.8513 -7.6628 14 6 4.6406 -2.4424 -8.9152 15 7 4.4550 -1.4661 -9.9916 16 6 5.1745 -1.3675 -11.1228 17 7 4.6961 -0.3709 -11.8227 18 6 3.6760 0.1886 -11.1735 19 7 3.4898 -0.4473 -10.0467 20 6 3.4966 -1.3925 -6.8708 21 6 2.0819 -2.6553 -2.5998 22 9 1.7841 -3.9471 -2.8600 23 6 1.6000 -2.0402 -1.4570 24 1 -0.3933 0.4416 0.7651 25 1 1.7923 -0.5138 0.8901 26 1 3.5345 1.7703 0.0321 27 1 1.5614 2.4679 -1.2085 28 1 2.9845 0.9877 -1.9704 29 1 3.1579 -3.4549 -4.8203 30 1 4.7854 -3.6587 -6.5429 31 1 6.1878 -2.5971 -6.0899 32 1 3.7653 -3.0895 -8.8566 33 1 5.5251 -3.0454 -9.1202 34 1 6.0028 -2.0005 -11.4048 35 1 3.0967 1.0311 -11.5217 36 1 3.2075 -0.3433 -6.9294 37 1 2.6857 -2.0713 -7.1350 38 1 0.9803 -2.5818 -0.7577 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14643980_17656566.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:34:24 Heat of formation + Delta-G solvation = 95.221266 kcal Electronic energy + Delta-G solvation = -24097.975447 eV Core-core repulsion = 20280.984411 eV Total energy + Delta-G solvation = -3816.991035 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.123 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -49.88994 -42.97299 -41.50693 -40.39967 -37.95194 -36.13457 -34.53956 -33.24142 -32.11225 -31.46442 -29.08170 -26.90523 -26.55217 -25.41431 -23.88425 -22.88005 -22.83931 -22.14050 -20.98452 -19.24717 -18.71538 -18.45212 -18.16221 -18.00044 -16.93545 -16.87244 -16.66476 -16.54593 -15.90736 -15.68296 -15.51673 -15.27587 -15.04205 -14.90521 -14.51333 -14.38055 -13.98599 -13.94666 -13.78132 -13.60976 -13.34643 -12.90262 -12.61051 -12.29334 -12.16391 -12.06798 -11.53656 -11.22571 -10.91180 -10.77521 -10.71468 -10.68237 -10.60609 -10.34722 -8.78074 -5.05361 -0.10401 0.11008 0.69910 1.19827 1.31927 1.57868 1.89028 1.93223 2.07542 2.49575 3.02316 3.09663 3.16448 3.28521 3.33392 3.41029 3.48197 3.60595 3.65365 3.81636 3.85381 3.94615 3.99502 4.05593 4.13228 4.24633 4.40105 4.45830 4.51135 4.56742 4.60825 4.64626 4.84888 4.95828 5.01941 5.10708 5.31249 5.40978 5.50978 5.83023 5.91456 6.14278 6.55288 6.91482 7.16457 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.059 4.059 3 Si 0.682 3.318 4 C -0.163 4.163 5 C 0.142 3.858 6 N -0.511 5.511 7 C 0.390 3.610 8 N -0.706 5.706 9 C 0.135 3.865 10 H 0.119 0.881 11 C -0.139 4.139 12 C -0.118 4.118 13 H 0.100 0.900 14 C 0.140 3.860 15 N -0.379 5.379 16 C 0.252 3.748 17 N -0.547 5.547 18 C 0.196 3.804 19 N -0.312 5.312 20 C -0.136 4.136 21 C -0.018 4.018 22 F -0.132 7.132 23 C -0.034 4.034 24 H 0.384 0.616 25 H 0.077 0.923 26 H -0.251 1.251 27 H -0.247 1.247 28 H 0.154 0.846 29 H 0.412 0.588 30 H 0.091 0.909 31 H 0.082 0.918 32 H 0.091 0.909 33 H 0.105 0.895 34 H 0.218 0.782 35 H 0.216 0.784 36 H 0.077 0.923 37 H 0.085 0.915 38 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.763 -1.231 4.549 5.031 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.170 4.170 3 Si 0.582 3.418 4 C -0.168 4.168 5 C -0.015 4.015 6 N -0.227 5.227 7 C 0.152 3.848 8 N -0.338 5.338 9 C 0.030 3.970 10 H 0.137 0.863 11 C -0.178 4.178 12 C -0.138 4.138 13 H 0.119 0.881 14 C 0.018 3.982 15 N -0.170 5.170 16 C -0.045 4.045 17 N -0.274 5.274 18 C -0.107 4.107 19 N -0.140 5.140 20 C -0.175 4.175 21 C -0.045 4.045 22 F -0.111 7.111 23 C -0.060 4.060 24 H 0.232 0.768 25 H 0.095 0.905 26 H -0.176 1.176 27 H -0.171 1.171 28 H 0.171 0.829 29 H 0.250 0.750 30 H 0.109 0.891 31 H 0.101 0.899 32 H 0.109 0.891 33 H 0.123 0.877 34 H 0.234 0.766 35 H 0.233 0.767 36 H 0.096 0.904 37 H 0.103 0.897 38 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.547 -0.210 3.107 4.023 hybrid contribution -0.481 -1.817 0.279 1.900 sum 2.066 -2.028 3.387 4.455 Atomic orbital electron populations 1.86493 1.17175 1.81853 1.49816 1.24466 0.85761 1.10221 0.96589 0.95104 0.80862 0.77943 0.87855 1.19940 1.03654 0.94431 0.98793 1.22126 0.92773 0.98571 0.88022 1.67250 1.26490 1.07610 1.21372 1.18431 0.90182 0.89028 0.87197 1.44550 1.54385 1.14400 1.20445 1.22496 0.91409 0.95383 0.87723 0.86267 1.23414 1.00849 0.98854 0.94690 1.22608 0.99787 0.99492 0.91917 0.88144 1.21872 1.03575 0.88480 0.84260 1.50588 1.24263 1.25165 1.16985 1.26128 0.97607 0.96609 0.84175 1.70562 1.13513 1.10713 1.32600 1.26076 0.95196 1.00151 0.89245 1.78100 1.11620 1.02325 1.21909 1.23499 0.96225 1.03269 0.94539 1.17976 1.06787 0.80951 0.98747 1.91490 1.92185 1.33487 1.93963 1.21261 0.95770 0.94185 0.94828 0.76820 0.90543 1.17589 1.17132 0.82921 0.75005 0.89094 0.89944 0.89109 0.87695 0.76561 0.76726 0.90441 0.89655 0.83069 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.28 12.75 -35.23 -0.45 -0.17 16 2 C -0.06 0.05 2.83 36.01 0.10 0.15 16 3 Si 0.68 -1.26 29.82 -169.99 -5.07 -6.32 16 4 C -0.16 -0.32 5.43 -104.47 -0.57 -0.88 16 5 C 0.14 0.40 9.84 -17.57 -0.17 0.23 16 6 N -0.51 -1.87 9.13 -12.37 -0.11 -1.99 16 7 C 0.39 1.10 7.49 -154.86 -1.16 -0.06 16 8 N -0.71 -0.35 5.51 -53.06 -0.29 -0.64 16 9 C 0.14 -0.07 4.27 -67.11 -0.29 -0.35 16 10 H 0.12 0.11 7.40 -51.93 -0.38 -0.27 16 11 C -0.14 0.43 7.39 -25.92 -0.19 0.24 16 12 C -0.12 0.25 3.85 -89.81 -0.35 -0.10 16 13 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 14 C 0.14 -0.39 6.39 -4.04 -0.03 -0.41 16 15 N -0.38 -0.19 3.69 -62.62 -0.23 -0.42 16 16 C 0.25 0.06 12.63 -90.66 -1.14 -1.08 16 17 N -0.55 -1.77 11.19 -15.83 -0.18 -1.94 16 18 C 0.20 0.53 13.03 -91.81 -1.20 -0.67 16 19 N -0.31 -0.98 12.57 29.29 0.37 -0.61 16 20 C -0.14 0.03 7.43 -25.91 -0.19 -0.17 16 21 C -0.02 -0.05 7.35 -39.10 -0.29 -0.34 16 22 F -0.13 -0.36 16.65 2.25 0.04 -0.32 16 23 C -0.03 -0.07 9.75 -39.26 -0.38 -0.45 16 24 H 0.38 -2.13 8.74 45.56 0.40 -1.73 16 25 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 26 H -0.25 -0.10 7.11 56.52 0.40 0.31 16 27 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 28 H 0.15 0.26 4.88 -52.49 -0.26 0.01 16 29 H 0.41 -0.40 8.20 -40.82 -0.33 -0.73 16 30 H 0.09 -0.39 8.08 -51.93 -0.42 -0.81 16 31 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 32 H 0.09 -0.26 7.84 -51.93 -0.41 -0.67 16 33 H 0.10 -0.59 8.09 -51.93 -0.42 -1.01 16 34 H 0.22 -0.92 8.06 -52.48 -0.42 -1.34 16 35 H 0.22 -0.06 8.06 -52.49 -0.42 -0.48 16 36 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 37 H 0.08 0.01 7.90 -51.93 -0.41 -0.40 16 38 H 0.15 0.09 8.06 -52.48 -0.42 -0.34 16 LS Contribution 330.88 15.07 4.99 4.99 Total: 0.00 -9.67 330.88 -11.17 -20.85 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -4.38 Total: -9.52 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -5.85 Total: -3.89 kcal Atomic # 7 Polarization: -5.15 SS G_CDS: -0.45 Total: -5.60 kcal Atomic # 8 Polarization: 0.28 SS G_CDS: -0.45 Total: -0.17 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.07 Total: -6.32 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -9.67 -11.17 -20.85 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14643980_17656566.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.067 kcal (2) G-P(sol) polarization free energy of solvation -9.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.172 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.846 kcal (6) G-S(sol) free energy of system = (1) + (5) 95.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds