Wall clock time and date at job start Mon Mar 8 2021 07:14:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.09000 * 109.47303 * 300.00327 * 6 4 3 8 8 C 1.53000 * 109.46900 * 60.00293 * 6 4 3 9 9 C 1.53002 * 109.47130 * 179.97438 * 8 6 4 10 10 C 1.53003 * 109.47284 * 300.00135 * 9 8 6 11 11 H 1.09001 * 109.46705 * 300.00146 * 10 9 8 12 12 C 1.52994 * 109.47081 * 179.97438 * 10 9 8 13 13 N 1.46498 * 109.47291 * 64.99942 * 12 10 9 14 14 C 1.38410 * 119.99669 * 179.97438 * 13 12 10 15 15 N 1.32491 * 119.22281 * 359.73457 * 14 13 12 16 16 C 1.32268 * 120.74231 * 179.71967 * 15 14 13 17 17 C 1.38606 * 119.19839 * 0.54036 * 16 15 14 18 18 C 1.50696 * 120.72412 * 179.71010 * 17 16 15 19 19 O 1.42899 * 109.47298 * 245.02539 * 18 17 16 20 20 Si 1.86304 * 109.47029 * 5.02174 * 18 17 16 21 21 C 1.38601 * 118.55679 * 359.73185 * 17 16 15 22 22 N 1.32275 * 119.19853 * 0.02562 * 21 17 16 23 23 C 1.53000 * 109.46830 * 59.99666 * 10 9 8 24 24 C 1.52994 * 109.47562 * 300.00039 * 23 10 9 25 25 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 26 26 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 27 27 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 29 29 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 30 30 H 1.08998 * 109.47349 * 299.99708 * 8 6 4 31 31 H 1.09000 * 109.47115 * 59.99918 * 8 6 4 32 32 H 1.09003 * 109.47012 * 179.97438 * 9 8 6 33 33 H 1.09000 * 109.46905 * 60.00137 * 9 8 6 34 34 H 1.09004 * 109.47379 * 185.00509 * 12 10 9 35 35 H 1.09006 * 109.47148 * 305.00048 * 12 10 9 36 36 H 0.96998 * 120.00230 * 0.02562 * 13 12 10 37 37 H 1.08002 * 120.40330 * 180.24920 * 16 15 14 38 38 H 1.09000 * 109.47216 * 125.01734 * 18 17 16 39 39 H 0.96703 * 114.00057 * 180.02562 * 19 18 17 40 40 H 1.48505 * 110.00173 * 178.67873 * 20 18 17 41 41 H 1.48494 * 109.99860 * 300.00013 * 20 18 17 42 42 H 1.07998 * 120.40395 * 179.97438 * 21 17 16 43 43 H 1.09005 * 109.46870 * 179.97438 * 23 10 9 44 44 H 1.09000 * 109.47102 * 60.00156 * 23 10 9 45 45 H 1.09000 * 109.47007 * 300.00175 * 24 23 10 46 46 H 1.09003 * 109.47577 * 180.02562 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.5852 3.4690 -0.8904 8 6 3.4486 3.6850 1.2486 9 6 4.0339 5.0986 1.2484 10 6 5.5618 5.0181 1.2494 11 1 5.8970 4.4861 2.1399 12 6 6.1471 6.4316 1.2486 13 7 5.7938 7.1072 2.4996 14 6 6.2159 8.4054 2.7281 15 7 6.9432 9.0206 1.8073 16 6 7.3579 10.2630 1.9920 17 6 7.0322 10.9163 3.1702 18 6 7.4922 12.3296 3.4193 19 8 8.4008 12.3475 4.5221 20 14 8.3487 12.9811 1.8985 21 6 6.2748 10.2415 4.1146 22 7 5.8879 9.0014 3.8651 23 6 6.0339 4.2704 0.0008 24 6 5.4487 2.8568 0.0010 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3635 -1.0276 0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 2.3601 3.7421 1.2481 31 1 3.7842 3.1533 2.1390 32 1 3.6972 5.6314 2.1378 33 1 3.6987 5.6305 0.3580 34 1 7.2320 6.3757 1.1597 35 1 5.7419 6.9921 0.4060 36 1 5.2647 6.6445 3.1680 37 1 7.9471 10.7606 1.2360 38 1 6.6308 12.9571 3.6480 39 1 8.7380 13.2273 4.7397 40 1 8.7790 14.3851 2.1200 41 1 9.5250 12.1341 1.5761 42 1 6.0043 10.7219 5.0432 43 1 7.1224 4.2134 0.0013 44 1 5.6987 4.8023 -0.8896 45 1 5.7839 2.3249 0.8914 46 1 5.7853 2.3240 -0.8883 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14654748_12175864.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:14:50 Heat of formation + Delta-G solvation = -75.509052 kcal Electronic energy + Delta-G solvation = -26630.593619 eV Core-core repulsion = 22714.517618 eV Total energy + Delta-G solvation = -3916.076001 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.173 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.99631 -41.69216 -39.84215 -38.17961 -37.61700 -36.66974 -34.62726 -33.72251 -32.69809 -31.94888 -31.60598 -27.90358 -26.21106 -25.71677 -24.47609 -23.86476 -23.24900 -22.73918 -21.58550 -20.89017 -19.32083 -18.70879 -18.61100 -18.38326 -17.56386 -17.53079 -16.65249 -16.47261 -16.18312 -15.92106 -15.63117 -15.35657 -15.33940 -14.96278 -14.90569 -14.62239 -14.51011 -14.06800 -13.91459 -13.82528 -13.55497 -13.37813 -13.29520 -13.11605 -12.87898 -12.58913 -12.33804 -12.24691 -12.21488 -11.86715 -11.75048 -11.72057 -11.59935 -11.47687 -11.32774 -11.14770 -11.11122 -10.68145 -9.93996 -9.02944 -5.03752 0.14162 0.24882 1.21257 1.24943 1.52358 1.68120 1.87656 1.89186 2.84390 3.18224 3.34028 3.41354 3.47458 3.54186 3.67709 3.78073 3.83507 3.88460 3.89136 3.95729 4.00744 4.06651 4.16521 4.18953 4.25850 4.29469 4.33822 4.37722 4.49105 4.59584 4.64567 4.70129 4.73416 4.80395 4.83303 4.88118 4.95024 4.98254 5.01697 5.05027 5.09109 5.18555 5.26230 5.34612 5.51787 5.83333 6.07178 6.37570 6.48129 6.80105 7.36904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.507 6.507 6 C -0.079 4.079 7 H 0.110 0.890 8 C -0.111 4.111 9 C -0.113 4.113 10 C -0.104 4.104 11 H 0.081 0.919 12 C 0.141 3.859 13 N -0.695 5.695 14 C 0.566 3.434 15 N -0.561 5.561 16 C 0.201 3.799 17 C -0.248 4.248 18 C -0.054 4.054 19 O -0.538 6.538 20 Si 0.676 3.324 21 C 0.224 3.776 22 N -0.570 5.570 23 C -0.109 4.109 24 C -0.104 4.104 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.079 0.921 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.070 0.930 35 H 0.071 0.929 36 H 0.414 0.586 37 H 0.166 0.834 38 H 0.078 0.922 39 H 0.381 0.619 40 H -0.257 1.257 41 H -0.253 1.253 42 H 0.169 0.831 43 H 0.075 0.925 44 H 0.071 0.929 45 H 0.074 0.926 46 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.262 3.059 -1.853 4.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.098 4.098 7 H 0.128 0.872 8 C -0.148 4.148 9 C -0.151 4.151 10 C -0.123 4.123 11 H 0.099 0.901 12 C 0.016 3.984 13 N -0.332 5.332 14 C 0.210 3.790 15 N -0.284 5.284 16 C 0.033 3.967 17 C -0.256 4.256 18 C -0.165 4.165 19 O -0.345 6.345 20 Si 0.577 3.423 21 C 0.056 3.944 22 N -0.292 5.292 23 C -0.147 4.147 24 C -0.141 4.141 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.098 0.902 31 H 0.088 0.912 32 H 0.088 0.912 33 H 0.090 0.910 34 H 0.088 0.912 35 H 0.090 0.910 36 H 0.252 0.748 37 H 0.183 0.817 38 H 0.096 0.904 39 H 0.229 0.771 40 H -0.182 1.182 41 H -0.177 1.177 42 H 0.186 0.814 43 H 0.094 0.906 44 H 0.090 0.910 45 H 0.092 0.908 46 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -2.715 1.324 -2.562 3.961 hybrid contribution 0.547 0.923 1.528 1.866 sum -2.168 2.247 -1.034 3.289 Atomic orbital electron populations 1.21817 0.92354 1.03239 1.03636 1.23068 0.95580 0.79961 1.02693 1.86508 1.24511 1.32641 1.83806 1.23823 0.80629 0.92737 0.72150 1.90684 1.60470 1.43206 1.45030 1.21158 0.96858 0.89593 1.02197 0.87165 1.21532 1.01564 0.95712 0.96027 1.21616 0.94275 0.96115 1.03071 1.21499 0.95868 0.94925 1.00014 0.90107 1.21403 1.00282 0.91360 0.85306 1.44175 1.57705 1.09709 1.21603 1.19388 0.87037 0.87263 0.85342 1.67945 1.16911 1.10750 1.32757 1.22763 0.91077 0.88473 0.94337 1.20596 1.07535 0.98543 0.98898 1.24401 0.96632 0.96399 0.99064 1.86595 1.63715 1.34772 1.49459 0.95257 0.84982 0.79406 0.82640 1.22790 0.87153 0.87527 0.96977 1.67977 1.28241 1.12107 1.20837 1.21492 1.01105 0.94753 0.97343 1.21441 0.91422 0.97199 1.04050 0.91386 0.91371 0.90043 0.91154 0.91171 0.90215 0.91225 0.91152 0.90984 0.91201 0.91033 0.74789 0.81693 0.90413 0.77094 1.18202 1.17718 0.81440 0.90644 0.90992 0.90772 0.90576 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.61 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.60 10.12 -39.26 -0.40 -1.00 16 4 C 0.46 0.95 7.26 36.01 0.26 1.21 16 5 O -0.51 -2.56 15.73 -18.75 -0.29 -2.86 16 6 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 7 H 0.11 -0.24 8.14 -51.93 -0.42 -0.67 16 8 C -0.11 0.22 5.14 -26.73 -0.14 0.08 16 9 C -0.11 0.31 5.08 -26.73 -0.14 0.18 16 10 C -0.10 0.27 2.23 -90.62 -0.20 0.06 16 11 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 12 C 0.14 -0.16 5.04 -4.05 -0.02 -0.18 16 13 N -0.69 -0.28 5.43 -62.31 -0.34 -0.62 16 14 C 0.57 1.66 8.43 -322.80 -2.72 -1.06 16 15 N -0.56 -1.63 9.59 -13.93 -0.13 -1.76 16 16 C 0.20 0.27 9.92 -17.23 -0.17 0.10 16 17 C -0.25 -0.26 5.40 -104.35 -0.56 -0.82 16 18 C -0.05 0.05 2.82 36.00 0.10 0.16 16 19 O -0.54 -0.17 12.82 -35.23 -0.45 -0.62 16 20 Si 0.68 -1.20 29.92 -169.99 -5.09 -6.29 16 21 C 0.22 0.41 10.99 -17.23 -0.19 0.22 16 22 N -0.57 -1.88 10.46 -13.93 -0.15 -2.02 16 23 C -0.11 0.27 5.20 -26.73 -0.14 0.14 16 24 C -0.10 0.10 4.49 -26.73 -0.12 -0.02 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 29 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 30 H 0.08 -0.15 8.11 -51.93 -0.42 -0.57 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.07 -0.19 7.18 -51.93 -0.37 -0.56 16 33 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.41 -0.28 7.77 -40.82 -0.32 -0.59 16 37 H 0.17 -0.17 5.04 -52.49 -0.26 -0.43 16 38 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 39 H 0.38 -1.39 8.74 45.56 0.40 -0.99 16 40 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 41 H -0.25 -0.33 7.06 56.52 0.40 0.07 16 42 H 0.17 -0.05 8.06 -52.49 -0.42 -0.48 16 43 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 44 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 45 H 0.07 0.01 8.10 -51.93 -0.42 -0.41 16 46 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 374.22 15.07 5.64 5.64 Total: 0.00 -8.27 374.22 -12.22 -20.50 By element: Atomic # 1 Polarization: -4.39 SS G_CDS: -7.35 Total: -11.74 kcal Atomic # 6 Polarization: 4.44 SS G_CDS: -3.66 Total: 0.78 kcal Atomic # 7 Polarization: -3.79 SS G_CDS: -0.62 Total: -4.41 kcal Atomic # 8 Polarization: -3.34 SS G_CDS: -1.14 Total: -4.48 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.09 Total: -6.29 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -8.27 -12.22 -20.50 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14654748_12175864.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.013 kcal (2) G-P(sol) polarization free energy of solvation -8.274 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.222 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.496 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds