Wall clock time and date at job start Mon Mar 8 2021 07:14:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45192 * 109.47109 * 2 1 4 4 C 1.34230 * 117.00018 * 179.97438 * 3 2 1 5 5 O 1.20826 * 120.00015 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00046 * 179.97438 * 4 3 2 7 7 H 1.09002 * 109.46793 * 60.00715 * 6 4 3 8 8 C 1.53002 * 109.46958 * 180.02562 * 6 4 3 9 9 C 1.52997 * 109.46978 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.47415 * 300.00098 * 9 8 6 11 11 H 1.09002 * 109.47070 * 300.00053 * 10 9 8 12 12 C 1.53000 * 109.47233 * 179.97438 * 10 9 8 13 13 N 1.46506 * 109.46901 * 174.99970 * 12 10 9 14 14 C 1.38612 * 119.99679 * 180.02562 * 13 12 10 15 15 N 1.29684 * 124.95023 * 0.02562 * 14 13 12 16 16 C 1.32125 * 116.86526 * 179.97438 * 15 14 13 17 17 C 1.33324 * 114.57962 * 0.02562 * 16 15 14 18 18 C 1.50698 * 125.95376 * 180.02562 * 17 16 15 19 19 O 1.42907 * 109.46661 * 299.99828 * 18 17 16 20 20 Si 1.86299 * 109.47418 * 179.97438 * 18 17 16 21 21 S 1.70967 * 124.94709 * 179.72328 * 14 13 12 22 22 C 1.52997 * 109.46817 * 59.99873 * 10 9 8 23 23 C 1.52992 * 109.47482 * 300.00014 * 22 10 9 24 24 H 1.09005 * 109.47066 * 60.00281 * 1 2 3 25 25 H 1.09003 * 109.46881 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.46992 * 299.99805 * 1 2 3 27 27 H 1.08998 * 109.47230 * 239.99698 * 2 1 3 28 28 H 1.09001 * 109.46829 * 120.00434 * 2 1 3 29 29 H 1.09002 * 109.47097 * 60.00192 * 8 6 4 30 30 H 1.08998 * 109.47844 * 300.00407 * 8 6 4 31 31 H 1.09000 * 109.47140 * 180.02562 * 9 8 6 32 32 H 1.09002 * 109.47497 * 60.00450 * 9 8 6 33 33 H 1.08990 * 109.47170 * 295.00238 * 12 10 9 34 34 H 1.09001 * 109.46952 * 55.00315 * 12 10 9 35 35 H 0.97000 * 119.99867 * 0.02562 * 13 12 10 36 36 H 1.07997 * 122.70957 * 180.02562 * 16 15 14 37 37 H 1.09006 * 109.47110 * 59.99202 * 18 17 16 38 38 H 0.96695 * 113.99858 * 299.99565 * 19 18 17 39 39 H 1.48503 * 109.99909 * 58.68013 * 20 18 17 40 40 H 1.48499 * 110.00008 * 179.97438 * 20 18 17 41 41 H 1.09002 * 109.47153 * 60.00231 * 22 10 9 42 42 H 1.08998 * 109.47533 * 179.97438 * 22 10 9 43 43 H 1.09002 * 109.47103 * 300.00247 * 23 22 10 44 44 H 1.08996 * 109.47747 * 179.97438 * 23 22 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9373 0.0000 7 1 3.5844 3.4699 0.8896 8 6 5.4486 2.8572 0.0001 9 6 6.0334 4.2710 -0.0011 10 6 5.5619 5.0170 -1.2510 11 1 5.8979 4.4841 -2.1405 12 6 6.1463 6.4310 -1.2518 13 7 5.7935 7.1044 -2.5042 14 6 6.2156 8.4044 -2.7348 15 7 6.9245 9.1124 -1.9114 16 6 7.2388 10.3371 -2.2948 17 6 6.7735 10.6786 -3.4966 18 6 6.9790 12.0056 -4.1806 19 8 6.4245 13.0476 -3.3750 20 14 6.1333 11.9863 -5.8405 21 16 5.8836 9.3055 -4.1493 22 6 4.0341 5.0970 -1.2511 23 6 3.4492 3.6833 -1.2499 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8933 -0.5139 -0.8899 28 1 1.8933 -0.5139 0.8900 29 1 5.7846 2.3247 -0.8896 30 1 5.7846 2.3254 0.8903 31 1 7.1219 4.2140 -0.0014 32 1 5.6975 4.8040 0.8885 33 1 5.7401 6.9924 -0.4105 34 1 7.2312 6.3759 -1.1620 35 1 5.2647 6.6404 -3.1721 36 1 7.8253 11.0074 -1.6839 37 1 8.0459 12.1818 -4.3187 38 1 5.4762 12.9552 -3.2107 39 1 4.6834 11.7151 -5.6686 40 1 6.3281 13.2897 -6.5249 41 1 3.6981 5.6299 -0.3615 42 1 3.6981 5.6288 -2.1412 43 1 3.7852 3.1504 -2.1394 44 1 2.3608 3.7403 -1.2495 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14654748_15704118.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:14:56 Heat of formation + Delta-G solvation = -87.188406 kcal Electronic energy + Delta-G solvation = -25054.241045 eV Core-core repulsion = 21292.236747 eV Total energy + Delta-G solvation = -3762.004298 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.134 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.75820 -40.73419 -39.80636 -38.09181 -37.62503 -36.56160 -33.40288 -32.49218 -31.95370 -31.09167 -27.99926 -26.33977 -24.96671 -24.15912 -23.88575 -23.21251 -21.73951 -21.00267 -20.63273 -19.70724 -18.65769 -18.17252 -17.61237 -17.59766 -17.03977 -16.59574 -16.24579 -16.17837 -15.76237 -15.62057 -15.33501 -15.07888 -14.95430 -14.81520 -14.62445 -14.02780 -13.86095 -13.83513 -13.61473 -13.43435 -13.15112 -12.91316 -12.87531 -12.62024 -12.39119 -12.34688 -12.29330 -12.00743 -11.91029 -11.65125 -11.51048 -11.37883 -11.19395 -11.13087 -10.87469 -10.23543 -10.15927 -8.71475 -5.05109 0.00061 0.06308 0.71779 1.21244 1.26158 1.56616 1.64512 1.91487 2.06492 2.14303 3.31770 3.35692 3.41436 3.47628 3.67247 3.79831 3.83104 3.92554 3.94585 3.98125 4.02284 4.13398 4.20160 4.26150 4.27851 4.32055 4.53920 4.55268 4.58201 4.63147 4.69423 4.77074 4.77575 4.82756 4.88244 4.92284 4.98044 4.98665 5.04210 5.11060 5.14950 5.28197 5.48393 5.82703 6.03877 6.36856 6.76519 7.03553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.079 4.079 7 H 0.110 0.890 8 C -0.103 4.103 9 C -0.109 4.109 10 C -0.104 4.104 11 H 0.081 0.919 12 C 0.139 3.861 13 N -0.692 5.692 14 C 0.326 3.674 15 N -0.551 5.551 16 C 0.120 3.880 17 C -0.306 4.306 18 C -0.017 4.017 19 O -0.526 6.526 20 Si 0.654 3.346 21 S 0.085 5.915 22 C -0.114 4.114 23 C -0.111 4.111 24 H 0.067 0.933 25 H 0.081 0.919 26 H 0.067 0.933 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.074 0.926 30 H 0.076 0.924 31 H 0.075 0.925 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.070 0.930 35 H 0.414 0.586 36 H 0.176 0.824 37 H 0.125 0.875 38 H 0.377 0.623 39 H -0.244 1.244 40 H -0.238 1.238 41 H 0.072 0.928 42 H 0.068 0.932 43 H 0.069 0.931 44 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.443 -1.793 -1.739 3.494 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.306 3.694 5 O -0.393 6.393 6 C -0.098 4.098 7 H 0.128 0.872 8 C -0.141 4.141 9 C -0.147 4.147 10 C -0.123 4.123 11 H 0.100 0.900 12 C 0.013 3.987 13 N -0.333 5.333 14 C -0.044 4.044 15 N -0.276 5.276 16 C -0.032 4.032 17 C -0.429 4.429 18 C -0.130 4.130 19 O -0.333 6.333 20 Si 0.553 3.447 21 S 0.334 5.666 22 C -0.151 4.151 23 C -0.148 4.148 24 H 0.086 0.914 25 H 0.100 0.900 26 H 0.086 0.914 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.093 0.907 30 H 0.095 0.905 31 H 0.094 0.906 32 H 0.090 0.910 33 H 0.088 0.912 34 H 0.089 0.911 35 H 0.251 0.749 36 H 0.193 0.807 37 H 0.142 0.858 38 H 0.224 0.776 39 H -0.168 1.168 40 H -0.161 1.161 41 H 0.090 0.910 42 H 0.087 0.913 43 H 0.088 0.912 44 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -2.593 -2.064 -2.514 4.160 hybrid contribution -0.377 0.417 1.248 1.369 sum -2.970 -1.647 -1.266 3.624 Atomic orbital electron populations 1.21821 0.92346 1.03259 1.03628 1.23070 0.95583 0.79932 1.02711 1.86505 1.24498 1.32673 1.83802 1.23807 0.80643 0.92718 0.72184 1.90687 1.60463 1.43192 1.44995 1.21155 0.96884 0.89638 1.02161 0.87184 1.21441 0.91395 0.97165 1.04096 1.21496 1.01164 0.94774 0.97304 1.21500 0.95800 0.94879 1.00082 0.90035 1.21463 1.00375 0.91423 0.85394 1.44069 1.58381 1.09147 1.21654 1.23738 0.95573 0.91478 0.93657 1.66494 1.20692 1.07174 1.33285 1.21331 0.97640 0.90727 0.93453 1.25501 1.13809 1.01638 1.01919 1.24069 1.04396 0.82343 1.02189 1.86615 1.28085 1.47306 1.71260 0.95214 0.82197 0.88392 0.78884 1.83982 1.55197 1.07711 1.19748 1.21617 0.94329 0.96170 1.02989 1.21530 1.01579 0.95655 0.96066 0.91386 0.90021 0.91379 0.91153 0.91142 0.90728 0.90542 0.90587 0.91024 0.91182 0.91135 0.74871 0.80744 0.85751 0.77557 1.16786 1.16132 0.90959 0.91321 0.91185 0.90206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.66 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.48 10.12 -39.26 -0.40 -0.87 16 4 C 0.46 0.77 7.25 36.01 0.26 1.03 16 5 O -0.51 -2.36 15.73 -18.75 -0.29 -2.66 16 6 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 7 H 0.11 -0.27 8.14 -51.93 -0.42 -0.70 16 8 C -0.10 0.15 4.49 -26.73 -0.12 0.03 16 9 C -0.11 0.32 5.20 -26.73 -0.14 0.18 16 10 C -0.10 0.35 2.23 -90.62 -0.20 0.14 16 11 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 12 C 0.14 -0.25 5.34 -4.04 -0.02 -0.27 16 13 N -0.69 0.97 5.44 -62.30 -0.34 0.63 16 14 C 0.33 0.33 8.09 -87.68 -0.71 -0.38 16 15 N -0.55 -1.57 10.14 -15.21 -0.15 -1.73 16 16 C 0.12 0.23 11.22 -19.14 -0.21 0.01 16 17 C -0.31 -0.22 5.74 -36.03 -0.21 -0.43 16 18 C -0.02 0.00 2.98 36.00 0.11 0.11 16 19 O -0.53 -0.61 12.87 -35.23 -0.45 -1.06 16 20 Si 0.65 -0.39 31.06 -169.99 -5.28 -5.67 16 21 S 0.08 -0.01 20.57 -107.50 -2.21 -2.22 16 22 C -0.11 0.40 5.07 -26.74 -0.14 0.26 16 23 C -0.11 0.29 5.13 -26.73 -0.14 0.15 16 24 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 25 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 28 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 29 H 0.07 -0.04 8.10 -51.93 -0.42 -0.46 16 30 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 31 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.41 -1.41 7.78 -40.82 -0.32 -1.73 16 36 H 0.18 0.14 8.06 -52.49 -0.42 -0.28 16 37 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 38 H 0.38 -0.55 8.70 45.56 0.40 -0.15 16 39 H -0.24 -0.31 7.11 56.52 0.40 0.09 16 40 H -0.24 -0.49 7.11 56.52 0.40 -0.09 16 41 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 42 H 0.07 -0.27 7.18 -51.93 -0.37 -0.64 16 43 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 44 H 0.08 -0.19 8.11 -51.93 -0.42 -0.62 16 LS Contribution 371.84 15.07 5.60 5.60 Total: 0.00 -6.92 371.84 -11.76 -18.68 By element: Atomic # 1 Polarization: -5.22 SS G_CDS: -7.09 Total: -12.30 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: -1.15 Total: 1.60 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.49 Total: -1.10 kcal Atomic # 8 Polarization: -3.45 SS G_CDS: -1.15 Total: -4.59 kcal Atomic # 14 Polarization: -0.39 SS G_CDS: -5.28 Total: -5.67 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.21 Total: -2.22 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -6.92 -11.76 -18.68 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14654748_15704118.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.513 kcal (2) G-P(sol) polarization free energy of solvation -6.917 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.758 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.675 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.188 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds