Wall clock time and date at job start Mon Mar 8 2021 07:14:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45203 * 109.46814 * 2 1 4 4 C 1.34234 * 116.99711 * 179.97438 * 3 2 1 5 5 O 1.20820 * 120.00004 * 0.02562 * 4 3 2 6 6 C 1.50705 * 119.99698 * 180.02562 * 4 3 2 7 7 H 1.09005 * 109.46786 * 60.00392 * 6 4 3 8 8 C 1.52998 * 109.46669 * 180.02562 * 6 4 3 9 9 C 1.53006 * 109.46939 * 180.02562 * 8 6 4 10 10 C 1.52998 * 109.46845 * 300.00164 * 9 8 6 11 11 H 1.08997 * 109.47053 * 299.99572 * 10 9 8 12 12 C 1.53006 * 109.46845 * 180.02562 * 10 9 8 13 13 N 1.46502 * 109.47049 * 174.99860 * 12 10 9 14 14 C 1.38607 * 119.99867 * 179.97438 * 13 12 10 15 15 N 1.29689 * 124.94798 * 180.30553 * 14 13 12 16 16 C 1.32123 * 116.86361 * 180.20674 * 15 14 13 17 17 C 1.50700 * 122.70942 * 179.79518 * 16 15 14 18 18 O 1.42899 * 109.47068 * 293.24883 * 17 16 15 19 19 Si 1.86303 * 109.47079 * 53.24679 * 17 16 15 20 20 C 1.33332 * 114.58068 * 359.52549 * 16 15 14 21 21 C 1.50695 * 125.95096 * 180.26491 * 20 16 15 22 22 S 1.70967 * 124.94866 * 0.02562 * 14 13 12 23 23 C 1.52998 * 109.47486 * 60.00171 * 10 9 8 24 24 C 1.52998 * 109.47116 * 300.00344 * 6 4 3 25 25 H 1.08993 * 109.46789 * 179.97438 * 1 2 3 26 26 H 1.08995 * 109.46838 * 300.00101 * 1 2 3 27 27 H 1.08995 * 109.47008 * 59.99767 * 1 2 3 28 28 H 1.09001 * 109.47000 * 240.00604 * 2 1 3 29 29 H 1.08995 * 109.47008 * 120.00233 * 2 1 3 30 30 H 1.08997 * 109.47464 * 60.00286 * 8 6 4 31 31 H 1.09004 * 109.47154 * 299.99934 * 8 6 4 32 32 H 1.09004 * 109.47144 * 180.02562 * 9 8 6 33 33 H 1.09005 * 109.46787 * 60.00047 * 9 8 6 34 34 H 1.08997 * 109.47231 * 54.99969 * 12 10 9 35 35 H 1.08997 * 109.46783 * 295.00090 * 12 10 9 36 36 H 0.97001 * 119.99712 * 0.02562 * 13 12 10 37 37 H 1.08996 * 109.47046 * 173.24834 * 17 16 15 38 38 H 0.96698 * 114.00371 * 59.99882 * 18 17 16 39 39 H 1.48501 * 109.99731 * 58.67990 * 19 17 16 40 40 H 1.48494 * 109.99883 * 179.97438 * 19 17 16 41 41 H 1.08998 * 109.46870 * 84.87030 * 21 20 16 42 42 H 1.08997 * 109.46886 * 204.86739 * 21 20 16 43 43 H 1.08999 * 109.47351 * 324.86983 * 21 20 16 44 44 H 1.09001 * 109.46903 * 59.99191 * 23 10 9 45 45 H 1.08996 * 109.47336 * 179.97438 * 23 10 9 46 46 H 1.08997 * 109.47053 * 299.99737 * 24 6 4 47 47 H 1.08995 * 109.47251 * 59.99997 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5449 0.0005 5 8 4.0808 0.5867 0.0005 6 6 3.9207 2.9376 0.0012 7 1 3.5844 3.4694 0.8913 8 6 5.4486 2.8574 0.0010 9 6 6.0334 4.2713 0.0023 10 6 5.5617 5.0194 -1.2462 11 1 5.8977 4.4881 -2.1367 12 6 6.1471 6.4330 -1.2453 13 7 5.7942 7.1085 -2.4965 14 6 6.2161 8.4089 -2.7249 15 7 5.9551 9.0980 -3.7921 16 6 6.4420 10.3251 -3.8443 17 6 6.2231 11.2386 -5.0227 18 8 6.9045 10.7150 -6.1644 19 14 4.3998 11.3556 -5.3875 20 6 7.1379 10.6920 -2.7678 21 6 7.7980 12.0298 -2.5547 22 16 7.1508 9.3405 -1.6379 23 6 4.0339 5.0995 -1.2461 24 6 3.4495 3.6849 -1.2480 25 1 -0.3632 -1.0276 -0.0005 26 1 -0.3633 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8899 28 1 1.8934 -0.5137 -0.8900 29 1 1.8934 -0.5138 0.8899 30 1 5.7845 2.3258 -0.8892 31 1 5.7846 2.3249 0.8908 32 1 7.1219 4.2143 0.0018 33 1 5.6974 4.8026 0.8929 34 1 7.2319 6.3771 -1.1560 35 1 5.7417 6.9935 -0.4029 36 1 5.2647 6.6459 -3.1647 37 1 6.6116 12.2302 -4.7909 38 1 6.6092 9.8329 -6.4285 39 1 3.6757 11.8689 -4.1970 40 1 4.1706 12.2541 -6.5473 41 1 7.0700 12.7341 -2.1521 42 1 8.6239 11.9195 -1.8520 43 1 8.1775 12.4034 -3.5058 44 1 3.6980 5.6307 -0.3556 45 1 3.6979 5.6328 -2.1353 46 1 3.7858 3.1531 -2.1380 47 1 2.3610 3.7419 -1.2483 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14654748_15704122.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:14:59 Heat of formation + Delta-G solvation = -93.026498 kcal Electronic energy + Delta-G solvation = -27163.456456 eV Core-core repulsion = 23245.661380 eV Total energy + Delta-G solvation = -3917.795076 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.149 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.77543 -40.97936 -39.95959 -37.89946 -37.48633 -36.61559 -33.86963 -32.87442 -32.14108 -31.90933 -29.10752 -27.46556 -25.65562 -24.77916 -24.33192 -23.77355 -23.25570 -21.79851 -21.01311 -20.37140 -19.05864 -18.66534 -17.84669 -17.68321 -17.60710 -17.35925 -16.62457 -16.42233 -15.97634 -15.75584 -15.40943 -15.25960 -15.09145 -15.00803 -14.72876 -14.34018 -14.08142 -14.01224 -13.96192 -13.75760 -13.69076 -13.48320 -13.44770 -13.22514 -12.92581 -12.75298 -12.63263 -12.43127 -12.35175 -12.26399 -12.03811 -11.74848 -11.68159 -11.51909 -11.36268 -11.21048 -11.02665 -10.60441 -10.36348 -9.94747 -8.62487 -4.81103 0.03829 0.20290 0.80121 1.20007 1.36975 1.63251 1.77144 1.88975 1.95236 2.11339 3.26234 3.35046 3.43751 3.48005 3.66585 3.71410 3.75731 3.90697 3.93916 3.97940 4.05913 4.10067 4.15085 4.17431 4.21319 4.26522 4.27399 4.35199 4.38199 4.46598 4.58838 4.62677 4.64529 4.74016 4.77503 4.84552 4.86906 4.90757 4.94238 4.95437 4.96882 5.01134 5.09308 5.20134 5.23042 5.47455 5.56082 6.27814 6.64008 6.75281 6.95399 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.110 0.890 8 C -0.103 4.103 9 C -0.111 4.111 10 C -0.099 4.099 11 H 0.085 0.915 12 C 0.124 3.876 13 N -0.692 5.692 14 C 0.320 3.680 15 N -0.542 5.542 16 C 0.075 3.925 17 C -0.033 4.033 18 O -0.537 6.537 19 Si 0.710 3.290 20 C -0.250 4.250 21 C -0.072 4.072 22 S 0.103 5.897 23 C -0.114 4.114 24 C -0.111 4.111 25 H 0.081 0.919 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.075 0.925 31 H 0.076 0.924 32 H 0.076 0.924 33 H 0.071 0.929 34 H 0.070 0.930 35 H 0.070 0.930 36 H 0.413 0.587 37 H 0.118 0.882 38 H 0.382 0.618 39 H -0.261 1.261 40 H -0.252 1.252 41 H 0.072 0.928 42 H 0.069 0.931 43 H 0.079 0.921 44 H 0.072 0.928 45 H 0.072 0.928 46 H 0.070 0.930 47 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.179 -1.659 2.538 3.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.306 3.694 5 O -0.393 6.393 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.141 4.141 9 C -0.149 4.149 10 C -0.118 4.118 11 H 0.103 0.897 12 C 0.000 4.000 13 N -0.333 5.333 14 C -0.051 4.051 15 N -0.269 5.269 16 C -0.055 4.055 17 C -0.146 4.146 18 O -0.342 6.342 19 Si 0.610 3.390 20 C -0.373 4.373 21 C -0.132 4.132 22 S 0.352 5.648 23 C -0.152 4.152 24 C -0.148 4.148 25 H 0.100 0.900 26 H 0.086 0.914 27 H 0.086 0.914 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.093 0.907 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.090 0.910 34 H 0.088 0.912 35 H 0.088 0.912 36 H 0.252 0.748 37 H 0.136 0.864 38 H 0.230 0.770 39 H -0.186 1.186 40 H -0.177 1.177 41 H 0.090 0.910 42 H 0.088 0.912 43 H 0.097 0.903 44 H 0.090 0.910 45 H 0.091 0.909 46 H 0.089 0.911 47 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.223 -1.416 3.278 4.206 hybrid contribution 0.198 0.087 -0.489 0.535 sum -2.025 -1.330 2.788 3.694 Atomic orbital electron populations 1.21819 0.92333 1.03265 1.03644 1.23076 0.95595 0.79902 1.02711 1.86507 1.24469 1.32693 1.83785 1.23792 0.80667 0.92697 0.72198 1.90687 1.60469 1.43192 1.44995 1.21156 0.96814 0.89694 1.02196 0.87181 1.21435 0.91472 0.97021 1.04176 1.21520 1.01163 0.94969 0.97207 1.21420 0.96050 0.93981 1.00322 0.89680 1.21637 1.00264 0.92985 0.85108 1.43939 1.58910 1.09033 1.21462 1.23260 0.96997 0.91555 0.93321 1.65962 1.30067 1.07003 1.23865 1.20062 0.97270 0.91258 0.96960 1.24726 1.10478 0.96219 0.83184 1.86466 1.65057 1.37796 1.44866 0.93806 0.75285 0.88571 0.81324 1.25077 1.11996 1.01961 0.98246 1.20185 0.99653 0.90288 1.03037 1.83953 1.52664 1.06469 1.21711 1.21634 0.93996 0.96313 1.03227 1.21537 1.01680 0.95552 0.96062 0.90022 0.91376 0.91366 0.91139 0.91147 0.90654 0.90497 0.90567 0.90981 0.91171 0.91164 0.74830 0.86440 0.76973 1.18573 1.17704 0.90957 0.91187 0.90258 0.90962 0.90914 0.91112 0.90114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.29 10.29 37.16 0.38 0.68 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.39 10.12 -39.27 -0.40 -0.79 16 4 C 0.46 0.62 7.26 36.01 0.26 0.88 16 5 O -0.51 -2.21 15.73 -18.75 -0.29 -2.51 16 6 C -0.08 0.15 2.63 -91.77 -0.24 -0.09 16 7 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 8 C -0.10 0.21 4.49 -26.73 -0.12 0.09 16 9 C -0.11 0.43 5.20 -26.73 -0.14 0.29 16 10 C -0.10 0.41 2.22 -90.62 -0.20 0.21 16 11 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 12 C 0.12 -0.42 4.92 -4.04 -0.02 -0.44 16 13 N -0.69 1.15 5.44 -62.29 -0.34 0.81 16 14 C 0.32 0.34 8.24 -87.68 -0.72 -0.39 16 15 N -0.54 -1.23 9.76 -11.36 -0.11 -1.34 16 16 C 0.08 0.19 5.20 -84.18 -0.44 -0.25 16 17 C -0.03 -0.06 2.84 36.01 0.10 0.05 16 18 O -0.54 -1.23 12.88 -35.23 -0.45 -1.68 16 19 Si 0.71 0.79 32.61 -169.99 -5.54 -4.75 16 20 C -0.25 -0.51 6.57 -36.02 -0.24 -0.75 16 21 C -0.07 0.00 9.71 36.00 0.35 0.35 16 22 S 0.10 0.08 22.32 -107.50 -2.40 -2.32 16 23 C -0.11 0.46 5.08 -26.70 -0.14 0.32 16 24 C -0.11 0.33 5.14 -26.70 -0.14 0.19 16 25 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.07 0.01 8.13 -51.93 -0.42 -0.42 16 29 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 30 H 0.07 -0.07 8.10 -51.93 -0.42 -0.49 16 31 H 0.08 -0.09 8.10 -51.93 -0.42 -0.51 16 32 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 33 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 34 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 36 H 0.41 -1.04 7.78 -40.82 -0.32 -1.36 16 37 H 0.12 0.13 6.33 -51.93 -0.33 -0.20 16 38 H 0.38 -0.20 8.70 45.56 0.40 0.20 16 39 H -0.26 -0.96 7.11 56.52 0.40 -0.56 16 40 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 41 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 42 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.08 -0.02 7.17 -51.93 -0.37 -0.39 16 44 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 45 H 0.07 -0.29 7.18 -51.93 -0.37 -0.67 16 46 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 47 H 0.08 -0.22 8.11 -51.93 -0.42 -0.64 16 LS Contribution 392.64 15.07 5.92 5.92 Total: 0.00 -6.99 392.64 -12.48 -19.47 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -7.80 Total: -14.19 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: -1.07 Total: 1.38 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.45 Total: -0.53 kcal Atomic # 8 Polarization: -3.83 SS G_CDS: -1.15 Total: -4.97 kcal Atomic # 14 Polarization: 0.79 SS G_CDS: -5.54 Total: -4.75 kcal Atomic # 16 Polarization: 0.08 SS G_CDS: -2.40 Total: -2.32 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -6.99 -12.48 -19.47 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14654748_15704122.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.557 kcal (2) G-P(sol) polarization free energy of solvation -6.986 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.470 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds