Wall clock time and date at job start Mon Mar 8 2021 07:38:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47107 * 2 1 4 4 C 1.50703 * 109.47266 * 239.99782 * 2 1 3 5 5 C 1.38019 * 120.33199 * 119.99566 * 4 2 1 6 6 N 1.31973 * 120.85191 * 179.72365 * 5 4 2 7 7 C 1.32394 * 121.62797 * 0.26010 * 6 5 4 8 8 N 1.39004 * 119.71023 * 180.02562 * 7 6 5 9 9 C 1.46497 * 120.00202 * 179.97438 * 8 7 6 10 10 H 1.09003 * 112.84664 * 25.32673 * 9 8 7 11 11 C 1.53775 * 113.61414 * 156.52846 * 9 8 7 12 12 C 1.53785 * 87.08224 * 139.98252 * 11 9 8 13 13 H 1.08999 * 113.61151 * 89.11448 * 12 11 9 14 14 C 1.52995 * 113.61415 * 219.93571 * 12 11 9 15 15 N 1.46498 * 109.47161 * 184.99831 * 14 12 11 16 16 C 1.34945 * 126.03741 * 124.71320 * 15 14 12 17 17 C 1.35315 * 107.74729 * 179.84057 * 16 15 14 18 18 C 1.39870 * 107.91620 * 0.42090 * 17 16 15 19 19 N 1.30830 * 108.20697 * 359.74205 * 18 17 16 20 20 C 1.53784 * 113.61412 * 254.13746 * 9 8 7 21 21 C 1.39139 * 120.58436 * 359.97438 * 7 6 5 22 22 C 1.38303 * 119.09870 * 0.02562 * 21 7 6 23 23 H 0.96698 * 114.00137 * 60.00377 * 1 2 3 24 24 H 1.08997 * 109.47054 * 120.00370 * 2 1 3 25 25 H 1.48502 * 110.00028 * 298.68109 * 3 2 1 26 26 H 1.48498 * 110.00039 * 60.00063 * 3 2 1 27 27 H 1.08002 * 119.57644 * 0.02562 * 5 4 2 28 28 H 0.97001 * 119.99585 * 359.97438 * 8 7 6 29 29 H 1.08998 * 113.61459 * 254.53001 * 11 9 8 30 30 H 1.08995 * 113.61779 * 25.42942 * 11 9 8 31 31 H 1.09002 * 109.46947 * 304.99721 * 14 12 11 32 32 H 1.08997 * 109.47388 * 64.99557 * 14 12 11 33 33 H 1.08002 * 126.12693 * 0.02562 * 16 15 14 34 34 H 1.08003 * 126.04544 * 180.16202 * 17 16 15 35 35 H 1.08003 * 125.89732 * 179.75713 * 18 17 16 36 36 H 1.08997 * 113.61268 * 334.56411 * 20 9 8 37 37 H 1.09001 * 113.61590 * 105.46981 * 20 9 8 38 38 H 1.08004 * 120.45005 * 179.97438 * 21 7 6 39 39 H 1.07994 * 120.74650 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7252 -0.0463 -2.1435 6 7 3.1752 -0.6600 -3.2217 7 6 2.8821 -1.9265 -3.4730 8 7 3.3782 -2.5337 -4.6207 9 6 3.0584 -3.9349 -4.9047 10 1 2.1276 -4.2593 -4.4394 11 6 3.1625 -4.3006 -6.3947 12 6 3.7913 -5.6296 -5.9437 13 1 3.0614 -6.4186 -5.7622 14 6 4.9545 -6.0877 -6.8257 15 7 5.4055 -7.4118 -6.3903 16 6 5.5030 -8.5120 -7.1656 17 6 5.9590 -9.5234 -6.3910 18 6 6.1375 -9.0266 -5.0958 19 7 5.8059 -7.7610 -5.0941 20 6 4.2346 -4.8960 -4.6648 21 6 2.0829 -2.6553 -2.5977 22 6 1.5965 -2.0387 -1.4593 23 1 -0.3933 0.4416 -0.7650 24 1 1.7922 -0.5139 0.8899 25 1 1.5878 2.4585 -1.2242 26 1 1.5614 2.4679 1.2085 27 1 2.9854 0.9876 -1.9710 28 1 3.9361 -2.0297 -5.2336 29 1 2.1956 -4.4189 -6.8839 30 1 3.8458 -3.6620 -6.9544 31 1 4.6252 -6.1392 -7.8635 32 1 5.7769 -5.3775 -6.7403 33 1 5.2631 -8.5734 -8.2169 34 1 6.1476 -10.5364 -6.7146 35 1 6.4886 -9.5904 -4.2441 36 1 5.2116 -4.4204 -4.7507 37 1 4.1320 -5.4943 -3.7594 38 1 1.8448 -3.6881 -2.8051 39 1 0.9735 -2.5792 -0.7621 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14687798_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:38:07 Heat of formation + Delta-G solvation = 124.985157 kcal Electronic energy + Delta-G solvation = -21553.090835 eV Core-core repulsion = 18272.270346 eV Total energy + Delta-G solvation = -3280.820489 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 287.137 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.07849 -41.46863 -40.29015 -37.99490 -35.82482 -33.89753 -33.27007 -31.31798 -30.88396 -28.56439 -26.90126 -26.37077 -24.89985 -23.98077 -22.43283 -21.94244 -21.42265 -20.85713 -18.77983 -18.52320 -18.26818 -17.53513 -16.70791 -16.48072 -16.32727 -16.16271 -15.73713 -15.36875 -15.30304 -14.98488 -14.83394 -14.32284 -14.04959 -13.98546 -13.69620 -13.62870 -13.54763 -13.22004 -13.12909 -12.46501 -12.24895 -12.05462 -11.91254 -11.65516 -11.44141 -11.08784 -10.71974 -10.50467 -10.34531 -10.31381 -9.49352 -8.69050 -4.93440 0.26687 0.44863 0.99992 1.32633 1.56073 1.61945 1.99020 1.99237 2.07780 2.85332 3.16142 3.28782 3.41183 3.48185 3.56275 3.63900 3.79693 3.87360 3.91313 3.96709 4.05052 4.07587 4.16243 4.24018 4.35508 4.46532 4.54909 4.57939 4.60786 4.71016 4.75886 4.82774 4.90144 4.97966 5.03193 5.13260 5.14405 5.34541 5.54716 5.76558 6.00644 6.08792 6.43727 6.53312 6.81829 7.17737 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.059 4.059 3 Si 0.678 3.322 4 C -0.234 4.234 5 C 0.156 3.844 6 N -0.541 5.541 7 C 0.409 3.591 8 N -0.711 5.711 9 C 0.129 3.871 10 H 0.110 0.890 11 C -0.137 4.137 12 C -0.119 4.119 13 H 0.099 0.901 14 C 0.145 3.855 15 N -0.373 5.373 16 C 0.050 3.950 17 C -0.274 4.274 18 C 0.042 3.958 19 N -0.290 5.290 20 C -0.136 4.136 21 C -0.239 4.239 22 C -0.006 4.006 23 H 0.375 0.625 24 H 0.117 0.883 25 H -0.258 1.258 26 H -0.256 1.256 27 H 0.155 0.845 28 H 0.406 0.594 29 H 0.081 0.919 30 H 0.092 0.908 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.172 0.828 34 H 0.147 0.853 35 H 0.182 0.818 36 H 0.088 0.912 37 H 0.077 0.923 38 H 0.133 0.867 39 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.819 -1.950 -3.653 4.221 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.170 4.170 3 Si 0.579 3.421 4 C -0.240 4.240 5 C -0.001 4.001 6 N -0.257 5.257 7 C 0.173 3.827 8 N -0.342 5.342 9 C 0.023 3.977 10 H 0.127 0.873 11 C -0.175 4.175 12 C -0.138 4.138 13 H 0.118 0.882 14 C 0.023 3.977 15 N -0.155 5.155 16 C -0.096 4.096 17 C -0.304 4.304 18 C -0.144 4.144 19 N -0.111 5.111 20 C -0.175 4.175 21 C -0.263 4.263 22 C -0.031 4.031 23 H 0.223 0.777 24 H 0.134 0.866 25 H -0.183 1.183 26 H -0.181 1.181 27 H 0.172 0.828 28 H 0.242 0.758 29 H 0.100 0.900 30 H 0.111 0.889 31 H 0.116 0.884 32 H 0.105 0.895 33 H 0.190 0.810 34 H 0.165 0.835 35 H 0.199 0.801 36 H 0.107 0.893 37 H 0.096 0.904 38 H 0.151 0.849 39 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.004 0.048 -3.071 3.232 hybrid contribution -1.258 -1.349 -0.806 2.013 sum -0.254 -1.302 -3.878 4.098 Atomic orbital electron populations 1.86588 1.17996 1.79926 1.49313 1.24758 0.83656 1.10553 0.98020 0.95152 0.91731 0.74708 0.80463 1.20927 1.06097 0.96565 1.00366 1.22210 0.91409 0.98647 0.87849 1.67159 1.27329 1.09078 1.22163 1.18434 0.88955 0.88389 0.86919 1.44515 1.55435 1.11416 1.22839 1.22545 0.99003 0.79951 0.96172 0.87263 1.23371 1.02112 0.95932 0.96134 1.22656 0.97326 0.96864 0.97004 0.88243 1.21730 0.96918 0.80598 0.98422 1.48733 1.50948 1.08914 1.06933 1.22608 1.01547 0.87141 0.98281 1.21564 1.13949 1.00971 0.93898 1.23954 0.99778 0.92302 0.98395 1.77388 1.20058 1.15396 0.98270 1.23562 0.98952 0.96905 0.98111 1.21480 1.05371 1.01857 0.97607 1.21192 0.93860 0.93193 0.94884 0.77749 0.86567 1.18329 1.18070 0.82825 0.75772 0.90004 0.88932 0.88353 0.89540 0.81048 0.83550 0.80087 0.89324 0.90446 0.84936 0.84661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.77 12.78 -35.23 -0.45 -1.22 16 2 C -0.06 -0.01 2.84 36.01 0.10 0.10 16 3 Si 0.68 -0.41 29.82 -169.99 -5.07 -5.48 16 4 C -0.23 -0.21 5.40 -104.46 -0.56 -0.78 16 5 C 0.16 0.23 9.84 -17.57 -0.17 0.06 16 6 N -0.54 -1.59 10.39 -12.44 -0.13 -1.72 16 7 C 0.41 0.75 7.65 -155.02 -1.19 -0.44 16 8 N -0.71 0.28 5.53 -53.14 -0.29 -0.02 16 9 C 0.13 -0.27 3.98 -67.12 -0.27 -0.54 16 10 H 0.11 -0.24 6.17 -51.93 -0.32 -0.56 16 11 C -0.14 0.50 7.39 -25.92 -0.19 0.31 16 12 C -0.12 0.30 3.82 -89.71 -0.34 -0.04 16 13 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 14 C 0.14 -0.33 6.35 -4.04 -0.03 -0.36 16 15 N -0.37 -0.25 3.68 -61.37 -0.23 -0.48 16 16 C 0.05 -0.01 11.45 -17.22 -0.20 -0.21 16 17 C -0.27 -0.17 10.80 -40.01 -0.43 -0.60 16 18 C 0.04 0.07 12.02 -17.37 -0.21 -0.14 16 19 N -0.29 -0.84 12.42 30.62 0.38 -0.46 16 20 C -0.14 0.18 7.45 -25.82 -0.19 -0.01 16 21 C -0.24 -0.24 9.28 -39.22 -0.36 -0.60 16 22 C -0.01 -0.01 9.76 -39.32 -0.38 -0.39 16 23 H 0.37 -0.45 8.70 45.56 0.40 -0.05 16 24 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 25 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 26 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 27 H 0.16 -0.08 4.88 -52.49 -0.26 -0.33 16 28 H 0.41 -0.39 8.84 -40.82 -0.36 -0.75 16 29 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.09 -0.40 8.07 -51.93 -0.42 -0.82 16 31 H 0.10 -0.45 8.07 -51.93 -0.42 -0.87 16 32 H 0.09 -0.21 7.86 -51.93 -0.41 -0.61 16 33 H 0.17 -0.59 8.06 -52.49 -0.42 -1.01 16 34 H 0.15 -0.16 8.06 -52.48 -0.42 -0.58 16 35 H 0.18 -0.16 8.06 -52.48 -0.42 -0.58 16 36 H 0.09 -0.05 7.91 -51.93 -0.41 -0.46 16 37 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 38 H 0.13 -0.08 6.06 -52.48 -0.32 -0.40 16 39 H 0.14 -0.01 8.06 -52.49 -0.42 -0.43 16 LS Contribution 328.04 15.07 4.94 4.94 Total: 0.00 -7.62 328.04 -10.36 -17.98 By element: Atomic # 1 Polarization: -4.82 SS G_CDS: -5.09 Total: -9.91 kcal Atomic # 6 Polarization: 0.79 SS G_CDS: -4.43 Total: -3.64 kcal Atomic # 7 Polarization: -2.41 SS G_CDS: -0.27 Total: -2.67 kcal Atomic # 8 Polarization: -0.77 SS G_CDS: -0.45 Total: -1.22 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.07 Total: -5.48 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -7.62 -10.36 -17.98 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687798_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.967 kcal (2) G-P(sol) polarization free energy of solvation -7.624 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 135.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.357 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.982 kcal (6) G-S(sol) free energy of system = (1) + (5) 124.985 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds