Wall clock time and date at job start Mon Mar 8 2021 07:38:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33326 * 125.95109 * 2 1 4 4 C 1.50699 * 122.70854 * 359.97438 * 3 2 1 5 5 O 1.42900 * 109.47646 * 329.99692 * 4 3 2 6 6 Si 1.86301 * 109.47086 * 209.99427 * 4 3 2 7 7 N 1.32115 * 114.57993 * 180.02562 * 3 2 1 8 8 C 1.29689 * 116.86755 * 359.97438 * 7 3 2 9 9 N 1.38611 * 124.94941 * 179.97438 * 8 7 3 10 10 C 1.46497 * 119.99890 * 180.02562 * 9 8 7 11 11 H 1.08996 * 112.85116 * 336.19440 * 10 9 8 12 12 C 1.53783 * 113.61816 * 107.50514 * 10 9 8 13 13 C 1.53781 * 87.08147 * 139.98009 * 12 10 9 14 14 H 1.09001 * 113.69100 * 89.12970 * 13 12 10 15 15 C 1.53007 * 113.61062 * 220.01715 * 13 12 10 16 16 N 1.46500 * 109.46993 * 272.50047 * 15 13 12 17 17 C 1.34943 * 126.03414 * 124.71725 * 16 15 13 18 18 C 1.35316 * 107.74531 * 180.25880 * 17 16 15 19 19 C 1.39873 * 107.91987 * 0.02562 * 18 17 16 20 20 N 1.30832 * 108.20166 * 0.02562 * 19 18 17 21 21 C 1.53780 * 87.08126 * 334.56831 * 13 12 10 22 22 S 1.70965 * 110.09982 * 0.24416 * 8 7 3 23 23 H 1.09004 * 109.47080 * 89.99740 * 1 2 3 24 24 H 1.09002 * 109.46739 * 209.99746 * 1 2 3 25 25 H 1.09000 * 109.47008 * 329.99568 * 1 2 3 26 26 H 1.09001 * 109.47437 * 89.99679 * 4 3 2 27 27 H 0.96691 * 114.00534 * 180.02562 * 5 4 3 28 28 H 1.48500 * 109.99978 * 60.00321 * 6 4 3 29 29 H 1.48502 * 110.00368 * 181.31865 * 6 4 3 30 30 H 0.97005 * 120.00357 * 0.02562 * 9 8 7 31 31 H 1.09006 * 113.61045 * 25.42796 * 12 10 9 32 32 H 1.09001 * 113.60819 * 254.53305 * 12 10 9 33 33 H 1.08997 * 109.46549 * 152.49690 * 15 13 12 34 34 H 1.08996 * 109.46944 * 32.50199 * 15 13 12 35 35 H 1.07996 * 126.13000 * 0.26422 * 17 16 15 36 36 H 1.07997 * 126.04396 * 180.02562 * 18 17 16 37 37 H 1.07999 * 125.89561 * 179.97438 * 19 18 17 38 38 H 1.09004 * 113.60980 * 139.98697 * 21 13 12 39 39 H 1.09000 * 113.61537 * 270.88362 * 21 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4830 -0.0006 5 8 0.4815 2.5020 -0.6747 6 14 2.9326 3.6147 -0.8785 7 7 3.5850 0.8188 -0.0005 8 6 3.9315 -0.4309 -0.0005 9 7 5.2385 -0.8925 -0.0015 10 6 5.5066 -2.3328 -0.0019 11 1 4.6809 -2.9171 0.4041 12 6 6.0351 -2.8607 -1.3461 13 6 6.9925 -3.7469 -0.5320 14 1 6.5745 -4.7193 -0.2716 15 6 8.3964 -3.8453 -1.1326 16 7 8.4357 -4.9399 -2.1054 17 6 8.8175 -4.8417 -3.3960 18 6 8.7063 -6.0696 -3.9536 19 6 8.2400 -6.9482 -2.9702 20 7 8.0766 -6.2720 -1.8622 21 6 6.8752 -2.7047 0.5926 22 16 2.5413 -1.4261 -0.0065 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3633 -0.8900 0.5138 25 1 -0.3633 0.8899 0.5139 26 1 1.6087 2.8217 1.0269 27 1 0.0694 3.3758 -0.7136 28 1 3.1221 3.1637 -2.2806 29 1 2.4186 5.0078 -0.8582 30 1 5.9756 -0.2620 -0.0019 31 1 6.5426 -2.1033 -1.9435 32 1 5.2955 -3.4244 -1.9148 33 1 9.1182 -4.0382 -0.3390 34 1 8.6452 -2.9079 -1.6301 35 1 9.1520 -3.9440 -3.8945 36 1 8.9368 -6.3260 -4.9771 37 1 8.0472 -8.0025 -3.1030 38 1 6.8141 -3.1426 1.5890 39 1 7.6125 -1.9047 0.5253 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14687798_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:38:12 Heat of formation + Delta-G solvation = 129.263760 kcal Electronic energy + Delta-G solvation = -22121.418186 eV Core-core repulsion = 18774.397858 eV Total energy + Delta-G solvation = -3347.020328 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.110 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.08359 -41.04508 -40.43845 -37.81748 -35.92047 -33.88167 -32.43700 -30.98088 -29.41988 -28.34542 -27.00687 -25.61158 -24.66881 -23.66117 -22.11780 -21.74393 -20.95751 -19.92566 -19.29084 -18.41814 -18.11373 -17.33881 -16.81297 -16.58872 -16.28099 -16.06339 -15.64651 -15.34282 -15.13704 -14.63635 -14.40892 -14.01007 -13.89778 -13.83277 -13.81456 -13.73096 -13.52833 -13.30592 -13.07382 -12.86904 -12.39493 -12.23558 -12.11513 -11.75356 -11.57936 -11.51663 -11.03689 -10.56761 -10.38100 -10.30507 -9.93733 -9.48447 -8.55642 -4.67808 0.09659 0.22957 0.84729 0.99519 1.38236 1.54873 1.76039 1.86656 1.98814 1.99652 2.16579 3.05336 3.14653 3.24471 3.34126 3.48916 3.69211 3.90244 3.93328 3.98150 4.12781 4.23354 4.30970 4.38504 4.41532 4.42769 4.45241 4.50629 4.65688 4.77212 4.78525 4.89380 4.90078 4.95781 5.06324 5.14171 5.20500 5.38817 5.63237 5.76156 6.08475 6.28747 6.46708 6.80678 6.97493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.229 4.229 3 C 0.104 3.896 4 C -0.042 4.042 5 O -0.534 6.534 6 Si 0.718 3.282 7 N -0.539 5.539 8 C 0.320 3.680 9 N -0.683 5.683 10 C 0.130 3.870 11 H 0.109 0.891 12 C -0.149 4.149 13 C -0.120 4.120 14 H 0.111 0.889 15 C 0.146 3.854 16 N -0.371 5.371 17 C 0.052 3.948 18 C -0.275 4.275 19 C 0.045 3.955 20 N -0.296 5.296 21 C -0.132 4.132 22 S 0.097 5.903 23 H 0.071 0.929 24 H 0.057 0.943 25 H 0.085 0.915 26 H 0.082 0.918 27 H 0.382 0.618 28 H -0.263 1.263 29 H -0.265 1.265 30 H 0.413 0.587 31 H 0.091 0.909 32 H 0.076 0.924 33 H 0.088 0.912 34 H 0.097 0.903 35 H 0.172 0.828 36 H 0.147 0.853 37 H 0.183 0.817 38 H 0.086 0.914 39 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.433 0.691 1.063 2.744 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.352 4.352 3 C -0.025 4.025 4 C -0.154 4.154 5 O -0.341 6.341 6 Si 0.618 3.382 7 N -0.266 5.266 8 C -0.051 4.051 9 N -0.323 5.323 10 C 0.024 3.976 11 H 0.127 0.873 12 C -0.189 4.189 13 C -0.140 4.140 14 H 0.129 0.871 15 C 0.024 3.976 16 N -0.154 5.154 17 C -0.094 4.094 18 C -0.304 4.304 19 C -0.141 4.141 20 N -0.117 5.117 21 C -0.171 4.171 22 S 0.346 5.654 23 H 0.090 0.910 24 H 0.076 0.924 25 H 0.104 0.896 26 H 0.100 0.900 27 H 0.230 0.770 28 H -0.188 1.188 29 H -0.191 1.191 30 H 0.252 0.748 31 H 0.109 0.891 32 H 0.095 0.905 33 H 0.107 0.893 34 H 0.115 0.885 35 H 0.189 0.811 36 H 0.165 0.835 37 H 0.200 0.800 38 H 0.104 0.896 39 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 2.597 -0.182 1.661 3.088 hybrid contribution -0.767 1.306 -1.063 1.850 sum 1.830 1.124 0.598 2.229 Atomic orbital electron populations 1.20093 0.86493 1.02368 1.02711 1.25116 1.01402 0.92623 1.16046 1.18748 0.86542 0.94923 1.02294 1.23988 0.92189 0.97792 1.01453 1.86577 1.33120 1.35004 1.79442 0.93720 0.87393 0.75009 0.82041 1.65600 1.16816 1.16614 1.27534 1.23230 0.91949 0.91227 0.98712 1.43932 1.01672 1.06505 1.80177 1.22584 0.98030 0.79484 0.97469 0.87294 1.23679 0.99282 0.98922 0.96984 1.22708 0.94773 0.99674 0.96828 0.87055 1.21724 0.97847 0.86694 0.91309 1.48698 1.50724 1.07422 1.08540 1.22585 1.00880 1.00410 0.85493 1.21564 1.14334 0.92687 1.01837 1.23932 0.99101 1.00491 0.90612 1.77330 1.22759 0.87960 1.23670 1.23362 0.96073 0.98541 0.99169 1.83970 0.96604 1.10633 1.74236 0.91050 0.92422 0.89611 0.90038 0.76991 1.18778 1.19055 0.74801 0.89066 0.90534 0.89337 0.88452 0.81087 0.83540 0.80034 0.89551 0.88642 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.10 8.96 36.01 0.32 0.22 16 2 C -0.23 -0.74 6.50 -36.02 -0.23 -0.98 16 3 C 0.10 0.37 5.95 -84.19 -0.50 -0.13 16 4 C -0.04 -0.06 2.81 36.01 0.10 0.04 16 5 O -0.53 -0.56 9.86 -35.23 -0.35 -0.91 16 6 Si 0.72 1.02 32.08 -169.99 -5.45 -4.43 16 7 N -0.54 -1.82 8.94 -11.36 -0.10 -1.92 16 8 C 0.32 0.63 8.24 -87.68 -0.72 -0.09 16 9 N -0.68 0.67 5.51 -54.99 -0.30 0.36 16 10 C 0.13 -0.31 4.23 -67.12 -0.28 -0.59 16 11 H 0.11 -0.20 7.06 -51.93 -0.37 -0.57 16 12 C -0.15 0.34 7.43 -25.92 -0.19 0.15 16 13 C -0.12 0.32 3.87 -89.80 -0.35 -0.03 16 14 H 0.11 -0.09 7.96 -51.93 -0.41 -0.50 16 15 C 0.15 -0.37 6.35 -4.04 -0.03 -0.39 16 16 N -0.37 -0.23 3.68 -61.37 -0.23 -0.46 16 17 C 0.05 -0.01 11.45 -17.23 -0.20 -0.20 16 18 C -0.27 -0.19 10.80 -40.01 -0.43 -0.63 16 19 C 0.04 0.07 12.03 -17.37 -0.21 -0.14 16 20 N -0.30 -0.87 12.26 30.62 0.38 -0.50 16 21 C -0.13 0.53 7.39 -25.92 -0.19 0.34 16 22 S 0.10 0.18 21.69 -107.50 -2.33 -2.16 16 23 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 24 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 25 H 0.09 0.12 6.62 -51.93 -0.34 -0.22 16 26 H 0.08 -0.01 7.96 -51.93 -0.41 -0.43 16 27 H 0.38 -1.15 8.74 45.56 0.40 -0.75 16 28 H -0.26 -1.42 7.11 56.52 0.40 -1.02 16 29 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 30 H 0.41 -0.93 8.85 -40.82 -0.36 -1.29 16 31 H 0.09 -0.24 7.90 -51.93 -0.41 -0.65 16 32 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 34 H 0.10 -0.46 7.77 -51.93 -0.40 -0.86 16 35 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 36 H 0.15 -0.14 8.06 -52.49 -0.42 -0.57 16 37 H 0.18 -0.17 8.06 -52.49 -0.42 -0.59 16 38 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 39 H 0.10 -0.50 8.08 -51.93 -0.42 -0.92 16 LS Contribution 340.07 15.07 5.12 5.12 Total: 0.00 -7.99 340.07 -11.49 -19.48 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: -5.31 Total: -12.16 kcal Atomic # 6 Polarization: 0.48 SS G_CDS: -2.91 Total: -2.43 kcal Atomic # 7 Polarization: -2.26 SS G_CDS: -0.25 Total: -2.51 kcal Atomic # 8 Polarization: -0.56 SS G_CDS: -0.35 Total: -0.91 kcal Atomic # 14 Polarization: 1.02 SS G_CDS: -5.45 Total: -4.43 kcal Atomic # 16 Polarization: 0.18 SS G_CDS: -2.33 Total: -2.16 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -7.99 -11.49 -19.48 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687798_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 148.740 kcal (2) G-P(sol) polarization free energy of solvation -7.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 140.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.488 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.477 kcal (6) G-S(sol) free energy of system = (1) + (5) 129.264 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds