Wall clock time and date at job start Mon Mar 8 2021 07:38:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46915 * 2 1 4 4 C 1.50699 * 109.47189 * 239.99907 * 2 1 3 5 5 C 1.37980 * 120.32787 * 119.97652 * 4 2 1 6 6 N 1.32003 * 120.90219 * 179.75015 * 5 4 2 7 7 C 1.32336 * 121.64743 * 0.55966 * 6 5 4 8 8 N 1.39138 * 119.72215 * 179.71555 * 7 6 5 9 9 C 1.46502 * 119.99903 * 359.72813 * 8 7 6 10 10 H 1.09001 * 112.84908 * 336.20049 * 9 8 7 11 11 C 1.53783 * 113.69001 * 107.46694 * 9 8 7 12 12 C 1.53780 * 87.08051 * 139.99344 * 11 9 8 13 13 H 1.08998 * 113.68946 * 89.12675 * 12 11 9 14 14 C 1.53001 * 113.61466 * 220.01719 * 12 11 9 15 15 N 1.46499 * 109.47001 * 272.49900 * 14 12 11 16 16 C 1.34954 * 126.03713 * 124.99785 * 15 14 12 17 17 C 1.35315 * 107.74451 * 180.02562 * 16 15 14 18 18 C 1.39867 * 107.92134 * 0.02562 * 17 16 15 19 19 N 1.30834 * 108.20347 * 359.97438 * 18 17 16 20 20 C 1.53774 * 87.08294 * 334.56546 * 12 11 9 21 21 C 1.39344 * 120.56000 * 359.44243 * 7 6 5 22 22 F 1.35097 * 120.47208 * 180.25304 * 21 7 6 23 23 C 1.38446 * 119.05705 * 0.27077 * 21 7 6 24 24 H 0.96704 * 113.99873 * 299.99894 * 1 2 3 25 25 H 1.08998 * 109.47151 * 119.99512 * 2 1 3 26 26 H 1.48498 * 109.99660 * 299.99759 * 3 2 1 27 27 H 1.48499 * 110.00225 * 61.31837 * 3 2 1 28 28 H 1.08005 * 119.54700 * 0.02562 * 5 4 2 29 29 H 0.96999 * 120.00111 * 179.73156 * 8 7 6 30 30 H 1.08997 * 113.61582 * 25.44424 * 11 9 8 31 31 H 1.09003 * 113.61225 * 254.53711 * 11 9 8 32 32 H 1.08993 * 109.47166 * 152.49536 * 14 12 11 33 33 H 1.08999 * 109.46588 * 32.49458 * 14 12 11 34 34 H 1.08001 * 126.12517 * 359.75938 * 16 15 14 35 35 H 1.07997 * 126.03615 * 179.97438 * 17 16 15 36 36 H 1.08000 * 125.89932 * 180.02562 * 18 17 16 37 37 H 1.08998 * 113.61937 * 139.97791 * 20 12 11 38 38 H 1.08999 * 113.62064 * 270.88962 * 20 12 11 39 39 H 1.07999 * 120.75446 * 180.02562 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7247 -0.0462 -2.1434 6 7 3.1749 -0.6589 -3.2224 7 6 2.8780 -1.9229 -3.4781 8 7 3.3696 -2.5275 -4.6308 9 6 4.2072 -1.7633 -5.5585 10 1 4.0466 -0.6876 -5.4859 11 6 5.6905 -2.1680 -5.5284 12 6 5.6830 -2.0120 -7.0583 13 1 5.9258 -1.0049 -7.3970 14 6 6.4820 -3.0933 -7.7885 15 7 7.8829 -2.6776 -7.8942 16 6 8.9539 -3.3813 -7.4712 17 6 10.0610 -2.6550 -7.7503 18 6 9.6525 -1.4666 -8.3644 19 7 8.3471 -1.4792 -8.4514 20 6 4.1726 -2.2953 -7.0010 21 6 2.0818 -2.6552 -2.5998 22 9 1.7839 -3.9470 -2.8600 23 6 1.6000 -2.0401 -1.4569 24 1 -0.3933 0.4417 0.7651 25 1 1.7924 -0.5137 0.8900 26 1 1.5615 2.4678 -1.2085 27 1 1.5879 2.4586 1.2242 28 1 2.9844 0.9878 -1.9704 29 1 3.1577 -3.4549 -4.8203 30 1 5.8570 -3.1922 -5.1948 31 1 6.3297 -1.4467 -5.0192 32 1 6.0696 -3.2379 -8.7870 33 1 6.4215 -4.0282 -7.2315 34 1 8.9312 -4.3487 -6.9915 35 1 11.0798 -2.9419 -7.5360 36 1 10.3025 -0.6756 -8.7082 37 1 3.5862 -1.6768 -7.6805 38 1 3.9240 -3.3543 -7.0698 39 1 0.9809 -2.5820 -0.7573 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14687798_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:38:14 Heat of formation + Delta-G solvation = 81.162223 kcal Electronic energy + Delta-G solvation = -23921.866617 eV Core-core repulsion = 20169.691847 eV Total energy + Delta-G solvation = -3752.174770 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.128 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -49.84954 -42.03144 -41.42257 -40.25920 -38.05067 -35.96456 -33.89796 -33.16339 -31.39686 -30.87891 -28.52577 -26.88174 -26.47937 -25.28189 -23.55188 -22.68884 -22.01352 -21.48896 -20.66876 -19.14460 -18.74852 -18.44513 -18.05203 -17.98222 -16.84883 -16.65502 -16.61667 -16.10764 -15.93987 -15.76189 -15.10971 -14.99370 -14.92392 -14.55373 -14.18882 -14.17786 -14.00936 -13.80766 -13.70833 -13.61923 -13.38682 -13.11220 -12.59179 -12.28133 -12.04147 -11.97584 -11.59261 -11.46057 -11.18901 -10.70261 -10.66159 -10.47136 -10.25309 -9.43647 -8.74054 -5.03282 -0.03673 0.15469 1.04573 1.19617 1.53238 1.60671 1.89797 1.97673 2.03192 2.53881 3.06969 3.17198 3.30877 3.32326 3.42593 3.49105 3.62207 3.71005 3.86915 3.89221 3.97564 4.03727 4.11751 4.25059 4.27811 4.38860 4.50206 4.52242 4.62514 4.65062 4.71333 4.78515 4.90771 4.94655 4.96371 5.01412 5.17576 5.20336 5.46079 5.80798 5.96253 6.13372 6.19219 6.36544 6.85693 6.97270 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.063 4.063 3 Si 0.678 3.322 4 C -0.162 4.162 5 C 0.151 3.849 6 N -0.510 5.510 7 C 0.390 3.610 8 N -0.707 5.707 9 C 0.139 3.861 10 H 0.122 0.878 11 C -0.147 4.147 12 C -0.119 4.119 13 H 0.110 0.890 14 C 0.145 3.855 15 N -0.370 5.370 16 C 0.052 3.948 17 C -0.275 4.275 18 C 0.044 3.956 19 N -0.295 5.295 20 C -0.141 4.141 21 C -0.021 4.021 22 F -0.134 7.134 23 C -0.037 4.037 24 H 0.381 0.619 25 H 0.079 0.921 26 H -0.251 1.251 27 H -0.257 1.257 28 H 0.164 0.836 29 H 0.412 0.588 30 H 0.083 0.917 31 H 0.074 0.926 32 H 0.087 0.913 33 H 0.096 0.904 34 H 0.171 0.829 35 H 0.147 0.853 36 H 0.183 0.817 37 H 0.082 0.918 38 H 0.089 0.911 39 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.876 -1.441 2.376 3.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.173 4.173 3 Si 0.579 3.421 4 C -0.167 4.167 5 C -0.006 4.006 6 N -0.227 5.227 7 C 0.152 3.848 8 N -0.338 5.338 9 C 0.034 3.966 10 H 0.139 0.861 11 C -0.186 4.186 12 C -0.139 4.139 13 H 0.128 0.872 14 C 0.024 3.976 15 N -0.153 5.153 16 C -0.094 4.094 17 C -0.305 4.305 18 C -0.142 4.142 19 N -0.117 5.117 20 C -0.180 4.180 21 C -0.047 4.047 22 F -0.113 7.113 23 C -0.063 4.063 24 H 0.230 0.770 25 H 0.097 0.903 26 H -0.175 1.175 27 H -0.182 1.182 28 H 0.180 0.820 29 H 0.249 0.751 30 H 0.102 0.898 31 H 0.093 0.907 32 H 0.105 0.895 33 H 0.114 0.886 34 H 0.189 0.811 35 H 0.164 0.836 36 H 0.199 0.801 37 H 0.101 0.899 38 H 0.107 0.893 39 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.185 0.176 0.721 1.399 hybrid contribution -1.010 -1.807 1.344 2.468 sum 0.175 -1.631 2.066 2.637 Atomic orbital electron populations 1.86589 1.17803 1.80177 1.49907 1.24562 0.84451 1.10795 0.97492 0.95197 0.91586 0.74447 0.80898 1.19827 1.03718 0.94251 0.98906 1.22273 0.91931 0.98955 0.87472 1.67296 1.26441 1.07468 1.21495 1.18446 0.89961 0.89118 0.87302 1.44574 1.54474 1.14332 1.20468 1.22448 0.89092 0.97856 0.87223 0.86058 1.23597 0.97352 1.02471 0.95172 1.22686 0.94685 1.00645 0.95881 0.87174 1.21738 0.76439 0.97332 1.02092 1.48710 1.06170 1.14399 1.45982 1.22582 0.87219 0.98922 1.00713 1.21551 0.99480 0.97240 1.12192 1.23925 0.92371 0.98678 0.99244 1.77335 1.12455 1.02003 1.19860 1.23413 0.95476 1.02375 0.96689 1.17975 1.06972 0.80940 0.98832 1.91485 1.92220 1.33610 1.93980 1.21252 0.95862 0.94371 0.94797 0.77042 0.90340 1.17513 1.18221 0.81970 0.75084 0.89809 0.90688 0.89504 0.88603 0.81137 0.83563 0.80051 0.89942 0.89289 0.83414 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.23 12.75 -35.23 -0.45 -0.68 16 2 C -0.06 0.06 2.83 36.01 0.10 0.16 16 3 Si 0.68 -1.16 29.82 -169.99 -5.07 -6.23 16 4 C -0.16 -0.14 5.43 -104.47 -0.57 -0.70 16 5 C 0.15 0.14 9.84 -17.57 -0.17 -0.03 16 6 N -0.51 -1.15 9.13 -12.37 -0.11 -1.26 16 7 C 0.39 0.76 7.49 -154.86 -1.16 -0.40 16 8 N -0.71 0.07 5.51 -53.06 -0.29 -0.23 16 9 C 0.14 -0.12 4.27 -67.11 -0.29 -0.40 16 10 H 0.12 0.07 7.41 -51.93 -0.38 -0.32 16 11 C -0.15 0.16 7.43 -25.92 -0.19 -0.03 16 12 C -0.12 0.17 3.87 -89.81 -0.35 -0.18 16 13 H 0.11 0.06 7.96 -51.93 -0.41 -0.36 16 14 C 0.15 -0.23 6.35 -4.04 -0.03 -0.25 16 15 N -0.37 -0.49 3.68 -61.37 -0.23 -0.71 16 16 C 0.05 0.02 11.45 -17.22 -0.20 -0.18 16 17 C -0.28 -0.29 10.80 -40.01 -0.43 -0.73 16 18 C 0.04 0.09 12.03 -17.37 -0.21 -0.12 16 19 N -0.29 -1.05 12.27 30.62 0.38 -0.68 16 20 C -0.14 0.34 7.39 -25.92 -0.19 0.15 16 21 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 22 F -0.13 -0.32 16.65 2.25 0.04 -0.28 16 23 C -0.04 -0.05 9.75 -39.26 -0.38 -0.44 16 24 H 0.38 -1.35 8.74 45.56 0.40 -0.95 16 25 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 26 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 27 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 28 H 0.16 -0.22 4.88 -52.48 -0.26 -0.47 16 29 H 0.41 -0.58 8.20 -40.82 -0.33 -0.91 16 30 H 0.08 -0.14 7.90 -51.93 -0.41 -0.55 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 32 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.10 -0.36 7.77 -51.93 -0.40 -0.76 16 34 H 0.17 -0.48 8.06 -52.49 -0.42 -0.91 16 35 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 36 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.09 -0.33 8.08 -51.93 -0.42 -0.75 16 39 H 0.15 0.05 8.06 -52.49 -0.42 -0.37 16 LS Contribution 335.83 15.07 5.06 5.06 Total: 0.00 -7.88 335.83 -9.82 -17.70 By element: Atomic # 1 Polarization: -4.44 SS G_CDS: -4.79 Total: -9.23 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -4.35 Total: -3.48 kcal Atomic # 7 Polarization: -2.62 SS G_CDS: -0.26 Total: -2.87 kcal Atomic # 8 Polarization: -0.23 SS G_CDS: -0.45 Total: -0.68 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.07 Total: -6.23 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -7.88 -9.82 -17.70 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687798_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.865 kcal (2) G-P(sol) polarization free energy of solvation -7.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 90.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.702 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.162 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds