Wall clock time and date at job start Mon Mar 8 2021 07:42:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.47234 * 2 1 4 4 C 1.50703 * 109.46766 * 119.99745 * 2 1 3 5 5 C 1.38605 * 120.72174 * 65.00315 * 4 2 1 6 6 N 1.32275 * 119.19757 * 179.97438 * 5 4 2 7 7 C 1.32498 * 120.74168 * 359.97438 * 6 5 4 8 8 N 1.38405 * 119.21601 * 180.02562 * 7 6 5 9 9 C 1.46496 * 119.99592 * 180.02562 * 8 7 6 10 10 H 1.09000 * 112.91246 * 23.74625 * 9 8 7 11 11 C 1.53786 * 113.61518 * 154.99866 * 9 8 7 12 12 C 1.53781 * 87.17350 * 89.15486 * 11 9 8 13 13 H 1.08997 * 113.61223 * 270.84552 * 12 11 9 14 14 C 1.52998 * 113.61406 * 140.02181 * 12 11 9 15 15 N 1.46499 * 109.46882 * 174.99788 * 14 12 11 16 16 C 1.34947 * 126.03226 * 124.72188 * 15 14 12 17 17 C 1.35320 * 107.74512 * 179.83722 * 16 15 14 18 18 C 1.39866 * 107.92044 * 0.42292 * 17 16 15 19 19 N 1.30835 * 108.20162 * 359.73691 * 18 17 16 20 20 C 1.53782 * 87.08260 * 25.39213 * 12 11 9 21 21 N 1.32494 * 121.56264 * 0.28341 * 7 6 5 22 22 C 1.32276 * 120.74155 * 359.43109 * 21 7 6 23 23 H 0.96707 * 113.99959 * 300.00545 * 1 2 3 24 24 H 1.08994 * 109.47320 * 239.99409 * 2 1 3 25 25 H 1.48503 * 109.99437 * 299.99771 * 3 2 1 26 26 H 1.48501 * 109.99858 * 61.31664 * 3 2 1 27 27 H 1.07998 * 120.39981 * 359.94756 * 5 4 2 28 28 H 0.97001 * 120.00290 * 359.97438 * 8 7 6 29 29 H 1.09002 * 113.61357 * 334.56403 * 11 9 8 30 30 H 1.09002 * 113.61608 * 203.74565 * 11 9 8 31 31 H 1.08995 * 109.47742 * 295.00269 * 14 12 11 32 32 H 1.09003 * 109.47049 * 55.00287 * 14 12 11 33 33 H 1.08003 * 126.13312 * 359.97438 * 16 15 14 34 34 H 1.07999 * 126.04183 * 180.15607 * 17 16 15 35 35 H 1.07995 * 125.90536 * 179.71635 * 18 17 16 36 36 H 1.08997 * 113.61668 * 89.11298 * 20 12 11 37 37 H 1.08998 * 113.61674 * 219.93807 * 20 12 11 38 38 H 1.08002 * 120.39999 * 180.25183 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6926 -2.0633 1.4141 6 7 2.1477 -2.6566 2.5052 7 6 2.8248 -1.9726 3.4158 8 7 3.2870 -2.6253 4.5454 9 6 4.0371 -1.8854 5.5634 10 1 3.8262 -0.8161 5.5522 11 6 3.9587 -2.5142 6.9646 12 6 5.1968 -3.3410 6.5797 13 1 4.9563 -4.2901 6.1006 14 6 6.2122 -3.4887 7.7146 15 7 7.2905 -4.3856 7.2913 16 6 8.6092 -4.0988 7.2955 17 6 9.2694 -5.1873 6.8369 18 6 8.3211 -6.1695 6.5331 19 7 7.1346 -5.6901 6.8051 20 6 5.5400 -2.2189 5.5858 21 7 3.0657 -0.6776 3.2730 22 6 2.6433 -0.0253 2.2026 23 1 -0.3933 0.4418 0.7651 24 1 1.7924 -0.5139 -0.8899 25 1 1.5615 2.4678 -1.2086 26 1 1.5879 2.4586 1.2242 27 1 1.1412 -2.6261 0.6755 28 1 3.1136 -3.5723 4.6635 29 1 3.0639 -3.1160 7.1237 30 1 4.1410 -1.8051 7.7722 31 1 6.6278 -2.5114 7.9599 32 1 5.7178 -3.9041 8.5927 33 1 9.0575 -3.1682 7.6108 34 1 10.3392 -5.2797 6.7213 35 1 8.5318 -7.1536 6.1413 36 1 6.1549 -1.4280 6.0153 37 1 5.9231 -2.5822 4.6322 38 1 2.8462 1.0295 2.0899 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14687810_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:42:33 Heat of formation + Delta-G solvation = 143.721909 kcal Electronic energy + Delta-G solvation = -21810.282269 eV Core-core repulsion = 18464.848355 eV Total energy + Delta-G solvation = -3345.433914 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 288.133 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.18981 -41.97385 -40.46533 -38.17072 -35.86350 -34.70645 -33.87055 -31.97940 -30.93397 -28.61062 -26.91839 -26.56187 -25.92104 -24.17023 -23.22402 -21.99099 -21.58659 -20.42892 -19.56450 -18.55848 -18.20631 -18.08222 -16.76961 -16.57526 -16.51074 -16.12924 -15.86050 -15.68872 -15.54113 -15.21958 -14.71373 -14.49634 -14.31258 -14.00611 -13.99154 -13.67934 -13.55914 -13.16986 -13.02171 -12.30955 -12.23040 -11.91139 -11.85896 -11.73270 -11.55341 -11.41178 -11.23157 -10.72477 -10.26413 -10.02452 -9.44755 -9.13772 -5.04391 0.05048 0.15682 1.03367 1.20116 1.49772 1.60066 1.73773 1.89603 2.01665 2.79238 3.09988 3.29861 3.30608 3.37446 3.41540 3.59767 3.68433 3.69721 3.72412 3.91223 3.96452 4.08378 4.17474 4.31918 4.37347 4.51993 4.52737 4.55103 4.65725 4.66873 4.77710 4.89037 4.90981 4.94375 5.08910 5.16800 5.30567 5.78213 5.79257 5.99716 6.12563 6.32921 6.38472 6.84190 7.28153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.680 3.320 4 C -0.292 4.292 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.570 3.430 8 N -0.677 5.677 9 C 0.139 3.861 10 H 0.112 0.888 11 C -0.139 4.139 12 C -0.124 4.124 13 H 0.104 0.896 14 C 0.143 3.857 15 N -0.370 5.370 16 C 0.052 3.948 17 C -0.275 4.275 18 C 0.043 3.957 19 N -0.296 5.296 20 C -0.146 4.146 21 N -0.561 5.561 22 C 0.197 3.803 23 H 0.376 0.624 24 H 0.120 0.880 25 H -0.253 1.253 26 H -0.257 1.257 27 H 0.171 0.829 28 H 0.416 0.584 29 H 0.079 0.921 30 H 0.101 0.899 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.172 0.828 34 H 0.147 0.853 35 H 0.182 0.818 36 H 0.093 0.907 37 H 0.071 0.929 38 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.806 3.164 1.652 4.540 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.165 4.165 3 Si 0.581 3.419 4 C -0.300 4.300 5 C 0.056 3.944 6 N -0.290 5.290 7 C 0.214 3.786 8 N -0.313 5.313 9 C 0.032 3.968 10 H 0.129 0.871 11 C -0.178 4.178 12 C -0.143 4.143 13 H 0.123 0.877 14 C 0.022 3.978 15 N -0.152 5.152 16 C -0.094 4.094 17 C -0.305 4.305 18 C -0.142 4.142 19 N -0.118 5.118 20 C -0.185 4.185 21 N -0.283 5.283 22 C 0.030 3.970 23 H 0.223 0.777 24 H 0.138 0.862 25 H -0.177 1.177 26 H -0.182 1.182 27 H 0.188 0.812 28 H 0.253 0.747 29 H 0.098 0.902 30 H 0.120 0.880 31 H 0.116 0.884 32 H 0.105 0.895 33 H 0.189 0.811 34 H 0.164 0.836 35 H 0.199 0.801 36 H 0.111 0.889 37 H 0.090 0.910 38 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 1.751 3.178 2.157 4.221 hybrid contribution -0.408 -0.036 -0.160 0.440 sum 1.343 3.142 1.997 3.958 Atomic orbital electron populations 1.86618 1.17757 1.79864 1.49324 1.24677 0.83761 1.10579 0.97444 0.95176 0.91493 0.74539 0.80727 1.21653 1.09040 0.97736 1.01583 1.22852 0.89104 0.90971 0.91491 1.67985 1.16544 1.40038 1.04457 1.19344 0.86891 0.85511 0.86849 1.43811 1.57859 1.11881 1.17724 1.21793 0.91068 0.97411 0.86503 0.87053 1.23387 0.98056 0.99518 0.96867 1.22975 0.95316 0.99593 0.96414 0.87743 1.21784 0.86587 0.92020 0.97449 1.48718 1.05310 1.11339 1.49877 1.22590 0.84363 1.00773 1.01688 1.21555 1.00912 0.94485 1.13547 1.23921 0.90010 1.00447 0.99871 1.77330 1.23103 0.92072 1.19262 1.23584 0.96891 0.98028 1.00046 1.67917 1.27079 1.08211 1.25090 1.22847 0.88113 0.99457 0.86613 0.77671 0.86212 1.17739 1.18236 0.81233 0.74657 0.90200 0.88015 0.88386 0.89542 0.81057 0.83561 0.80098 0.88880 0.91002 0.81640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.13 12.85 -35.23 -0.45 -0.58 16 2 C -0.05 0.07 2.83 36.01 0.10 0.17 16 3 Si 0.68 -1.33 29.95 -169.99 -5.09 -6.42 16 4 C -0.29 0.04 5.36 -104.35 -0.56 -0.52 16 5 C 0.22 0.25 10.99 -17.23 -0.19 0.07 16 6 N -0.57 -1.70 10.46 -13.93 -0.15 -1.84 16 7 C 0.57 1.48 8.43 -322.80 -2.72 -1.24 16 8 N -0.68 -0.43 5.41 -54.91 -0.30 -0.72 16 9 C 0.14 -0.16 4.34 -67.02 -0.29 -0.45 16 10 H 0.11 -0.05 7.37 -51.93 -0.38 -0.43 16 11 C -0.14 0.40 7.38 -25.92 -0.19 0.21 16 12 C -0.12 0.21 3.75 -89.81 -0.34 -0.13 16 13 H 0.10 0.05 7.96 -51.93 -0.41 -0.36 16 14 C 0.14 -0.26 6.35 -4.04 -0.03 -0.28 16 15 N -0.37 -0.45 3.68 -61.37 -0.23 -0.68 16 16 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 17 C -0.28 -0.30 10.80 -40.01 -0.43 -0.74 16 18 C 0.04 0.09 12.03 -17.37 -0.21 -0.11 16 19 N -0.30 -1.07 12.27 30.62 0.38 -0.69 16 20 C -0.15 0.20 7.44 -25.82 -0.19 0.01 16 21 N -0.56 -1.19 9.13 -13.93 -0.13 -1.32 16 22 C 0.20 0.05 9.92 -17.22 -0.17 -0.12 16 23 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 24 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 25 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 26 H -0.26 0.06 7.02 56.52 0.40 0.45 16 27 H 0.17 -0.11 8.06 -52.49 -0.42 -0.53 16 28 H 0.42 0.05 8.82 -40.82 -0.36 -0.31 16 29 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 30 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 31 H 0.10 -0.41 7.78 -51.93 -0.40 -0.82 16 32 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.17 -0.52 8.06 -52.48 -0.42 -0.95 16 34 H 0.15 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.18 -0.07 8.06 -52.49 -0.42 -0.49 16 36 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 37 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 38 H 0.17 -0.35 5.01 -52.49 -0.26 -0.61 16 LS Contribution 325.19 15.07 4.90 4.90 Total: 0.00 -8.19 325.19 -11.31 -19.49 By element: Atomic # 1 Polarization: -3.98 SS G_CDS: -4.83 Total: -8.81 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -5.41 Total: -3.32 kcal Atomic # 7 Polarization: -4.84 SS G_CDS: -0.42 Total: -5.26 kcal Atomic # 8 Polarization: -0.13 SS G_CDS: -0.45 Total: -0.58 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.09 Total: -6.42 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -8.19 -11.31 -19.49 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687810_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 163.215 kcal (2) G-P(sol) polarization free energy of solvation -8.185 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 155.030 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.493 kcal (6) G-S(sol) free energy of system = (1) + (5) 143.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds