Wall clock time and date at job start Mon Mar 8 2021 07:42:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.47234 * 2 1 4 4 C 1.50703 * 109.46766 * 119.99745 * 2 1 3 5 5 C 1.38605 * 120.72174 * 65.00315 * 4 2 1 6 6 N 1.32275 * 119.19757 * 179.97438 * 5 4 2 7 7 C 1.32498 * 120.74168 * 359.97438 * 6 5 4 8 8 N 1.38405 * 119.21601 * 180.02562 * 7 6 5 9 9 C 1.46496 * 119.99592 * 180.02562 * 8 7 6 10 10 H 1.09000 * 112.91246 * 23.74625 * 9 8 7 11 11 C 1.53786 * 113.61518 * 154.99866 * 9 8 7 12 12 C 1.53781 * 87.17350 * 89.15486 * 11 9 8 13 13 H 1.08997 * 113.61223 * 270.84552 * 12 11 9 14 14 C 1.52998 * 113.61406 * 140.02181 * 12 11 9 15 15 N 1.46499 * 109.46882 * 174.99788 * 14 12 11 16 16 C 1.34947 * 126.03226 * 124.72188 * 15 14 12 17 17 C 1.35320 * 107.74512 * 179.83722 * 16 15 14 18 18 C 1.39866 * 107.92044 * 0.42292 * 17 16 15 19 19 N 1.30835 * 108.20162 * 359.73691 * 18 17 16 20 20 C 1.53782 * 87.08260 * 25.39213 * 12 11 9 21 21 N 1.32494 * 121.56264 * 0.28341 * 7 6 5 22 22 C 1.32276 * 120.74155 * 359.43109 * 21 7 6 23 23 H 0.96707 * 113.99959 * 300.00545 * 1 2 3 24 24 H 1.08994 * 109.47320 * 239.99409 * 2 1 3 25 25 H 1.48503 * 109.99437 * 299.99771 * 3 2 1 26 26 H 1.48501 * 109.99858 * 61.31664 * 3 2 1 27 27 H 1.07998 * 120.39981 * 359.94756 * 5 4 2 28 28 H 0.97001 * 120.00290 * 359.97438 * 8 7 6 29 29 H 1.09002 * 113.61357 * 334.56403 * 11 9 8 30 30 H 1.09002 * 113.61608 * 203.74565 * 11 9 8 31 31 H 1.08995 * 109.47742 * 295.00269 * 14 12 11 32 32 H 1.09003 * 109.47049 * 55.00287 * 14 12 11 33 33 H 1.08003 * 126.13312 * 359.97438 * 16 15 14 34 34 H 1.07999 * 126.04183 * 180.15607 * 17 16 15 35 35 H 1.07995 * 125.90536 * 179.71635 * 18 17 16 36 36 H 1.08997 * 113.61668 * 89.11298 * 20 12 11 37 37 H 1.08998 * 113.61674 * 219.93807 * 20 12 11 38 38 H 1.08002 * 120.39999 * 180.25183 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6926 -2.0633 1.4141 6 7 2.1477 -2.6566 2.5052 7 6 2.8248 -1.9726 3.4158 8 7 3.2870 -2.6253 4.5454 9 6 4.0371 -1.8854 5.5634 10 1 3.8262 -0.8161 5.5522 11 6 3.9587 -2.5142 6.9646 12 6 5.1968 -3.3410 6.5797 13 1 4.9563 -4.2901 6.1006 14 6 6.2122 -3.4887 7.7146 15 7 7.2905 -4.3856 7.2913 16 6 8.6092 -4.0988 7.2955 17 6 9.2694 -5.1873 6.8369 18 6 8.3211 -6.1695 6.5331 19 7 7.1346 -5.6901 6.8051 20 6 5.5400 -2.2189 5.5858 21 7 3.0657 -0.6776 3.2730 22 6 2.6433 -0.0253 2.2026 23 1 -0.3933 0.4418 0.7651 24 1 1.7924 -0.5139 -0.8899 25 1 1.5615 2.4678 -1.2086 26 1 1.5879 2.4586 1.2242 27 1 1.1412 -2.6261 0.6755 28 1 3.1136 -3.5723 4.6635 29 1 3.0639 -3.1160 7.1237 30 1 4.1410 -1.8051 7.7722 31 1 6.6278 -2.5114 7.9599 32 1 5.7178 -3.9041 8.5927 33 1 9.0575 -3.1682 7.6108 34 1 10.3392 -5.2797 6.7213 35 1 8.5318 -7.1536 6.1413 36 1 6.1549 -1.4280 6.0153 37 1 5.9231 -2.5822 4.6322 38 1 2.8462 1.0295 2.0899 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_14687810_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:42:33 Heat of formation + Delta-G solvation = 145.817587 kcal Electronic energy + Delta-G solvation = -21810.191394 eV Core-core repulsion = 18464.848355 eV Total energy + Delta-G solvation = -3345.343038 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 288.133 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.21757 -41.99780 -40.38176 -38.14795 -35.84887 -34.78252 -33.85070 -31.99544 -30.96163 -28.56199 -26.79671 -26.51038 -25.95500 -24.12458 -23.23669 -21.99357 -21.59110 -20.34558 -19.58372 -18.55444 -18.18171 -18.07462 -16.72831 -16.55291 -16.44776 -16.11497 -15.85627 -15.68787 -15.49332 -15.21456 -14.70800 -14.48998 -14.28180 -14.02152 -13.88019 -13.58277 -13.45083 -13.17666 -12.90401 -12.29019 -12.16676 -11.95910 -11.84162 -11.72776 -11.57354 -11.33446 -11.18740 -10.70165 -10.31392 -10.08770 -9.47067 -9.15379 -4.91013 0.00590 0.09990 1.01463 1.30973 1.59629 1.67996 1.74877 1.95682 1.97672 2.73141 3.10699 3.41173 3.43344 3.51804 3.52893 3.62182 3.67308 3.75789 3.81948 4.00343 4.09781 4.19267 4.22217 4.41173 4.52376 4.62042 4.65162 4.69038 4.74429 4.76723 4.83328 4.91948 4.98489 5.06109 5.14800 5.17029 5.36230 5.75554 5.76610 5.99223 6.20437 6.33696 6.48299 6.78882 7.21518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.058 4.058 3 Si 0.761 3.239 4 C -0.283 4.283 5 C 0.212 3.788 6 N -0.594 5.594 7 C 0.554 3.446 8 N -0.678 5.678 9 C 0.134 3.866 10 H 0.108 0.892 11 C -0.123 4.123 12 C -0.118 4.118 13 H 0.076 0.924 14 C 0.136 3.864 15 N -0.374 5.374 16 C 0.054 3.946 17 C -0.295 4.295 18 C 0.027 3.973 19 N -0.339 5.339 20 C -0.139 4.139 21 N -0.573 5.573 22 C 0.193 3.807 23 H 0.385 0.615 24 H 0.130 0.870 25 H -0.299 1.299 26 H -0.276 1.276 27 H 0.182 0.818 28 H 0.414 0.586 29 H 0.076 0.924 30 H 0.127 0.873 31 H 0.131 0.869 32 H 0.089 0.911 33 H 0.207 0.793 34 H 0.160 0.840 35 H 0.194 0.806 36 H 0.113 0.887 37 H 0.043 0.957 38 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.404 4.559 2.431 6.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.169 4.169 3 Si 0.666 3.334 4 C -0.291 4.291 5 C 0.045 3.955 6 N -0.317 5.317 7 C 0.197 3.803 8 N -0.313 5.313 9 C 0.028 3.972 10 H 0.126 0.874 11 C -0.162 4.162 12 C -0.137 4.137 13 H 0.095 0.905 14 C 0.016 3.984 15 N -0.156 5.156 16 C -0.092 4.092 17 C -0.324 4.324 18 C -0.158 4.158 19 N -0.162 5.162 20 C -0.178 4.178 21 N -0.295 5.295 22 C 0.026 3.974 23 H 0.235 0.765 24 H 0.148 0.852 25 H -0.227 1.227 26 H -0.202 1.202 27 H 0.199 0.801 28 H 0.252 0.748 29 H 0.094 0.906 30 H 0.145 0.855 31 H 0.148 0.852 32 H 0.107 0.893 33 H 0.224 0.776 34 H 0.178 0.822 35 H 0.211 0.789 36 H 0.131 0.869 37 H 0.062 0.938 38 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 2.349 4.551 2.952 5.911 hybrid contribution -0.621 -0.439 -0.449 0.883 sum 1.728 4.113 2.503 5.115 Atomic orbital electron populations 1.86593 1.18514 1.80280 1.50113 1.24896 0.83223 1.11439 0.97309 0.94221 0.90157 0.71975 0.77032 1.21705 1.08450 0.97208 1.01760 1.23160 0.89181 0.91811 0.91381 1.67992 1.17512 1.40857 1.05306 1.19604 0.87334 0.85968 0.87348 1.43955 1.57741 1.11933 1.17670 1.21911 0.91061 0.97162 0.87089 0.87388 1.23361 0.97165 0.99299 0.96378 1.22798 0.96149 0.98347 0.96415 0.90536 1.22071 0.86184 0.93001 0.97107 1.48974 1.06381 1.10861 1.49414 1.23193 0.83966 1.01713 1.00369 1.21866 1.01641 0.94697 1.14191 1.24298 0.90170 1.01433 0.99901 1.77257 1.24144 0.93827 1.20940 1.23562 0.96816 0.98530 0.98865 1.67959 1.27637 1.08045 1.25896 1.23259 0.87655 1.00371 0.86153 0.76548 0.85214 1.22715 1.20222 0.80106 0.74814 0.90554 0.85488 0.85158 0.89266 0.77613 0.82230 0.78948 0.86860 0.93768 0.79466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.19 12.85 -148.98 -1.91 -2.10 16 2 C -0.06 0.17 2.83 71.24 0.20 0.37 16 3 Si 0.76 -3.35 29.95 68.60 2.05 -1.30 16 4 C -0.28 0.07 5.36 -19.69 -0.11 -0.04 16 5 C 0.21 0.63 10.99 84.71 0.93 1.56 16 6 N -0.59 -4.32 10.46 -197.99 -2.07 -6.39 16 7 C 0.55 3.49 8.43 261.48 2.20 5.69 16 8 N -0.68 -1.74 5.41 -327.63 -1.77 -3.51 16 9 C 0.13 -0.27 4.34 45.58 0.20 -0.08 16 10 H 0.11 -0.12 7.37 -2.39 -0.02 -0.14 16 11 C -0.12 0.79 7.38 31.12 0.23 1.02 16 12 C -0.12 0.37 3.75 -10.27 -0.04 0.33 16 13 H 0.08 0.22 7.96 -2.39 -0.02 0.21 16 14 C 0.14 -0.62 6.35 86.38 0.55 -0.07 16 15 N -0.37 -0.89 3.68 -348.06 -1.28 -2.17 16 16 C 0.05 -0.02 11.45 83.54 0.96 0.94 16 17 C -0.29 -0.68 10.80 21.99 0.24 -0.44 16 18 C 0.03 0.15 12.03 85.24 1.02 1.17 16 19 N -0.34 -2.91 12.27 -57.03 -0.70 -3.61 16 20 C -0.14 0.38 7.44 31.18 0.23 0.61 16 21 N -0.57 -2.64 9.13 -197.98 -1.81 -4.45 16 22 C 0.19 0.06 9.92 84.71 0.84 0.90 16 23 H 0.39 -1.85 8.70 -74.05 -0.64 -2.49 16 24 H 0.13 -0.64 7.96 -2.39 -0.02 -0.66 16 25 H -0.30 -1.08 7.11 99.48 0.71 -0.37 16 26 H -0.28 0.35 7.02 99.48 0.70 1.05 16 27 H 0.18 -0.11 8.06 -2.91 -0.02 -0.14 16 28 H 0.41 0.91 8.82 -92.71 -0.82 0.10 16 29 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 30 H 0.13 -1.42 8.10 -2.39 -0.02 -1.44 16 31 H 0.13 -1.46 7.78 -2.39 -0.02 -1.48 16 32 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 33 H 0.21 -1.77 8.06 -2.91 -0.02 -1.79 16 34 H 0.16 -0.25 8.06 -2.91 -0.02 -0.27 16 35 H 0.19 0.16 8.06 -2.91 -0.02 0.13 16 36 H 0.11 -0.78 7.90 -2.39 -0.02 -0.80 16 37 H 0.04 0.15 8.14 -2.39 -0.02 0.13 16 38 H 0.19 -0.98 5.01 -2.91 -0.01 -0.99 16 Total: 0.00 -21.00 325.19 -0.37 -21.37 By element: Atomic # 1 Polarization: -9.48 SS G_CDS: -0.34 Total: -9.82 kcal Atomic # 6 Polarization: 4.52 SS G_CDS: 7.46 Total: 11.98 kcal Atomic # 7 Polarization: -12.50 SS G_CDS: -7.63 Total: -20.13 kcal Atomic # 8 Polarization: -0.19 SS G_CDS: -1.91 Total: -2.10 kcal Atomic # 14 Polarization: -3.35 SS G_CDS: 2.05 Total: -1.30 kcal Total: -21.00 -0.37 -21.37 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687810_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 167.189 kcal (2) G-P(sol) polarization free energy of solvation -21.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 146.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.371 kcal (6) G-S(sol) free energy of system = (1) + (5) 145.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds