Wall clock time and date at job start Mon Mar 8 2021 07:42:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.33323 * 125.95359 * 2 1 4 4 C 1.50698 * 122.71002 * 0.02647 * 3 2 1 5 5 O 1.42902 * 109.47210 * 329.96629 * 4 3 2 6 6 Si 1.86303 * 109.46828 * 209.97408 * 4 3 2 7 7 N 1.32124 * 114.58053 * 180.02562 * 3 2 1 8 8 C 1.29683 * 116.86353 * 0.02562 * 7 3 2 9 9 N 1.38609 * 124.94801 * 179.97438 * 8 7 3 10 10 C 1.46499 * 119.99887 * 180.02562 * 9 8 7 11 11 H 1.09002 * 112.85372 * 23.80047 * 10 9 8 12 12 C 1.53787 * 113.61699 * 154.99994 * 10 9 8 13 13 C 1.53780 * 87.08097 * 89.11304 * 12 10 9 14 14 H 1.09001 * 113.61843 * 270.88725 * 13 12 10 15 15 C 1.52999 * 113.61319 * 140.06669 * 13 12 10 16 16 N 1.46507 * 109.46964 * 174.99836 * 15 13 12 17 17 C 1.34947 * 126.03233 * 124.71671 * 16 15 13 18 18 C 1.35320 * 107.74283 * 179.83478 * 17 16 15 19 19 C 1.39870 * 107.91729 * 0.43136 * 18 17 16 20 20 N 1.30838 * 108.20617 * 359.72813 * 19 18 17 21 21 C 1.53779 * 87.08187 * 25.43418 * 13 12 10 22 22 S 1.70968 * 110.10323 * 0.02562 * 8 7 3 23 23 H 1.08994 * 109.47703 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.46900 * 300.00245 * 1 2 3 25 25 H 1.09009 * 109.46914 * 59.99762 * 1 2 3 26 26 H 1.08996 * 109.47963 * 89.97205 * 4 3 2 27 27 H 0.96695 * 114.00486 * 300.00652 * 5 4 3 28 28 H 1.48507 * 109.99839 * 179.97438 * 6 4 3 29 29 H 1.48508 * 109.99855 * 301.31286 * 6 4 3 30 30 H 0.96995 * 120.00425 * 0.02562 * 9 8 7 31 31 H 1.08991 * 113.61470 * 203.66385 * 12 10 9 32 32 H 1.08997 * 113.60735 * 334.56704 * 12 10 9 33 33 H 1.08995 * 109.47171 * 295.00061 * 15 13 12 34 34 H 1.09004 * 109.47135 * 55.00547 * 15 13 12 35 35 H 1.07994 * 126.13073 * 0.02562 * 17 16 15 36 36 H 1.07998 * 126.03889 * 180.15841 * 18 17 16 37 37 H 1.08001 * 125.89632 * 179.75570 * 19 18 17 38 38 H 1.09004 * 113.61799 * 220.01738 * 21 13 12 39 39 H 1.08999 * 113.61360 * 89.11921 * 21 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0792 0.0000 4 6 1.7415 2.4829 0.0006 5 8 0.4815 2.5024 -0.6733 6 14 2.9326 3.6152 -0.8771 7 7 3.5851 0.8187 -0.0005 8 6 3.9315 -0.4310 -0.0015 9 7 5.2384 -0.8927 -0.0027 10 6 5.5064 -2.3330 -0.0043 11 1 4.6801 -2.9169 -0.4098 12 6 6.8743 -2.7045 -0.6009 13 6 7.4479 -2.5452 0.8170 14 1 7.7793 -1.5316 1.0427 15 6 8.4899 -3.6054 1.1792 16 7 9.0602 -3.3005 2.4938 17 6 9.0941 -4.1316 3.5565 18 6 9.7046 -3.4778 4.5719 19 6 10.0468 -2.2002 4.1170 20 7 9.6611 -2.0928 2.8714 21 6 6.0366 -2.8624 1.3387 22 16 2.5412 -1.4261 -0.0025 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 1.6092 2.8210 1.0283 27 1 0.5238 2.2130 -1.5949 28 1 2.4031 5.0026 -0.8840 29 1 4.2563 3.5795 -0.2048 30 1 5.9755 -0.2623 -0.0025 31 1 6.9228 -3.7254 -0.9794 32 1 7.2548 -1.9702 -1.3109 33 1 8.0155 -4.5863 1.2075 34 1 9.2824 -3.6066 0.4308 35 1 8.7066 -5.1390 3.5896 36 1 9.8904 -3.8713 5.5603 37 1 10.5440 -1.4346 4.6942 38 1 5.7408 -2.2557 2.1946 39 1 5.8561 -3.9266 1.4905 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14687810_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:42:41 Heat of formation + Delta-G solvation = 130.099186 kcal Electronic energy + Delta-G solvation = -22295.990130 eV Core-core repulsion = 18949.006028 eV Total energy + Delta-G solvation = -3346.984101 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.110 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.10437 -41.16113 -40.54597 -37.77284 -35.74679 -33.83848 -32.37270 -30.99690 -29.41052 -28.38742 -27.03110 -25.61824 -24.59851 -24.17228 -22.06665 -21.77030 -20.74863 -20.53684 -18.83894 -18.32757 -17.80865 -17.46810 -16.78990 -16.62843 -16.35648 -15.82911 -15.59424 -15.39477 -15.25486 -14.72797 -14.39806 -14.25891 -14.13246 -13.88515 -13.72192 -13.71519 -13.59765 -13.41702 -13.08369 -12.67455 -12.41826 -12.29475 -11.89198 -11.77286 -11.65930 -11.50112 -11.01417 -10.55727 -10.31910 -10.31029 -9.95900 -9.49163 -8.62803 -4.83007 0.03364 0.18804 0.79340 0.98742 1.40920 1.54757 1.78930 1.91203 1.96162 1.97705 2.27901 3.10581 3.23058 3.30035 3.38612 3.45909 3.56222 3.75371 3.91698 3.99762 4.13425 4.19544 4.28452 4.33354 4.35304 4.38292 4.49159 4.57288 4.62527 4.75787 4.78508 4.82058 4.88044 4.91310 5.00232 5.11845 5.13141 5.31512 5.60869 5.74996 6.07721 6.23919 6.51292 6.79734 6.97637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C -0.238 4.238 3 C 0.065 3.935 4 C -0.033 4.033 5 O -0.535 6.535 6 Si 0.716 3.284 7 N -0.543 5.543 8 C 0.320 3.680 9 N -0.677 5.677 10 C 0.129 3.871 11 H 0.099 0.901 12 C -0.134 4.134 13 C -0.123 4.123 14 H 0.106 0.894 15 C 0.143 3.857 16 N -0.371 5.371 17 C 0.052 3.948 18 C -0.275 4.275 19 C 0.044 3.956 20 N -0.296 5.296 21 C -0.151 4.151 22 S 0.101 5.899 23 H 0.057 0.943 24 H 0.074 0.926 25 H 0.083 0.917 26 H 0.120 0.880 27 H 0.378 0.622 28 H -0.262 1.262 29 H -0.252 1.252 30 H 0.414 0.586 31 H 0.104 0.896 32 H 0.084 0.916 33 H 0.098 0.902 34 H 0.088 0.912 35 H 0.172 0.828 36 H 0.147 0.853 37 H 0.182 0.818 38 H 0.075 0.925 39 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.100 -6.079 -2.764 6.678 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.361 4.361 3 C -0.065 4.065 4 C -0.146 4.146 5 O -0.340 6.340 6 Si 0.616 3.384 7 N -0.269 5.269 8 C -0.051 4.051 9 N -0.317 5.317 10 C 0.022 3.978 11 H 0.117 0.883 12 C -0.173 4.173 13 C -0.142 4.142 14 H 0.125 0.875 15 C 0.022 3.978 16 N -0.154 5.154 17 C -0.094 4.094 18 C -0.304 4.304 19 C -0.142 4.142 20 N -0.117 5.117 21 C -0.190 4.190 22 S 0.350 5.650 23 H 0.076 0.924 24 H 0.093 0.907 25 H 0.101 0.899 26 H 0.137 0.863 27 H 0.226 0.774 28 H -0.187 1.187 29 H -0.176 1.176 30 H 0.252 0.748 31 H 0.123 0.877 32 H 0.103 0.897 33 H 0.116 0.884 34 H 0.106 0.894 35 H 0.190 0.810 36 H 0.165 0.835 37 H 0.199 0.801 38 H 0.094 0.906 39 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.373 -5.316 -3.298 6.267 hybrid contribution 0.065 0.041 1.511 1.513 sum 0.438 -5.276 -1.786 5.587 Atomic orbital electron populations 1.20154 0.86324 1.01644 1.03755 1.25161 1.01328 0.92716 1.16848 1.20110 0.86708 0.97203 1.02471 1.24518 0.92368 0.95522 1.02207 1.86523 1.28919 1.89576 1.28987 0.94116 0.77625 0.76487 0.90147 1.65960 1.17317 1.16649 1.26996 1.23233 0.91611 0.91530 0.98697 1.43565 1.01943 1.06109 1.80088 1.21879 0.98368 0.80028 0.97515 0.88342 1.23345 0.94041 1.03615 0.96277 1.22953 0.93956 1.00692 0.96560 0.87550 1.21770 0.96294 0.98749 0.81003 1.48707 1.45563 1.10458 1.10626 1.22587 1.01385 0.97571 0.87876 1.21564 1.11380 0.96094 1.01383 1.23931 0.99806 0.97792 0.92651 1.77336 1.16353 1.02920 1.15134 1.23638 0.95303 1.02152 0.97937 1.83936 0.96479 1.10586 1.74030 0.92364 0.90685 0.89852 0.86312 0.77384 1.18717 1.17635 0.74795 0.87733 0.89726 0.88358 0.89419 0.81040 0.83532 0.80081 0.90575 0.88563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.00 8.91 36.01 0.32 0.32 16 2 C -0.24 -0.39 6.50 -36.02 -0.23 -0.63 16 3 C 0.07 0.17 5.92 -84.18 -0.50 -0.33 16 4 C -0.03 -0.05 2.94 36.00 0.11 0.06 16 5 O -0.54 -0.16 10.17 -35.23 -0.36 -0.51 16 6 Si 0.72 1.02 32.08 -169.99 -5.45 -4.43 16 7 N -0.54 -1.94 8.95 -11.36 -0.10 -2.04 16 8 C 0.32 0.62 8.24 -87.68 -0.72 -0.10 16 9 N -0.68 0.15 5.42 -54.99 -0.30 -0.15 16 10 C 0.13 -0.32 4.31 -67.11 -0.29 -0.61 16 11 H 0.10 -0.29 7.06 -51.93 -0.37 -0.65 16 12 C -0.13 0.54 7.39 -25.92 -0.19 0.35 16 13 C -0.12 0.30 3.74 -89.81 -0.34 -0.04 16 14 H 0.11 0.00 7.96 -51.93 -0.41 -0.42 16 15 C 0.14 -0.35 6.35 -4.04 -0.03 -0.38 16 16 N -0.37 -0.31 3.68 -61.36 -0.23 -0.54 16 17 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 18 C -0.27 -0.26 10.80 -40.01 -0.43 -0.69 16 19 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 20 N -0.30 -1.01 12.27 30.63 0.38 -0.63 16 21 C -0.15 0.36 7.43 -25.92 -0.19 0.17 16 22 S 0.10 0.08 21.69 -107.50 -2.33 -2.26 16 23 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 24 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 25 H 0.08 -0.10 6.40 -51.92 -0.33 -0.43 16 26 H 0.12 0.24 7.96 -51.93 -0.41 -0.17 16 27 H 0.38 -1.23 8.13 45.56 0.37 -0.86 16 28 H -0.26 -0.99 7.11 56.52 0.40 -0.58 16 29 H -0.25 -1.27 7.11 56.52 0.40 -0.87 16 30 H 0.41 -0.10 8.82 -40.82 -0.36 -0.46 16 31 H 0.10 -0.60 8.10 -51.93 -0.42 -1.02 16 32 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 33 H 0.10 -0.49 7.78 -51.93 -0.40 -0.89 16 34 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.17 -0.58 8.06 -52.49 -0.42 -1.00 16 36 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 37 H 0.18 -0.07 8.06 -52.49 -0.42 -0.50 16 38 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.10 -0.38 7.90 -51.93 -0.41 -0.79 16 LS Contribution 339.46 15.07 5.12 5.12 Total: 0.00 -7.96 339.46 -11.51 -19.47 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -5.33 Total: -11.83 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -2.90 Total: -2.20 kcal Atomic # 7 Polarization: -3.10 SS G_CDS: -0.25 Total: -3.35 kcal Atomic # 8 Polarization: -0.16 SS G_CDS: -0.36 Total: -0.51 kcal Atomic # 14 Polarization: 1.02 SS G_CDS: -5.45 Total: -4.43 kcal Atomic # 16 Polarization: 0.08 SS G_CDS: -2.33 Total: -2.26 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -7.96 -11.51 -19.47 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687810_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 149.565 kcal (2) G-P(sol) polarization free energy of solvation -7.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 141.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.466 kcal (6) G-S(sol) free energy of system = (1) + (5) 130.099 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds