Wall clock time and date at job start Mon Mar 8 2021 07:42:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.46883 * 2 1 4 4 C 1.50700 * 109.47481 * 119.99970 * 2 1 3 5 5 C 1.37983 * 120.33009 * 244.98044 * 4 2 1 6 6 N 1.32006 * 120.90082 * 180.02562 * 5 4 2 7 7 C 1.32331 * 121.64750 * 359.97438 * 6 5 4 8 8 N 1.39143 * 119.71787 * 180.02562 * 7 6 5 9 9 C 1.46501 * 119.99990 * 0.02562 * 8 7 6 10 10 H 1.08998 * 112.85019 * 334.66174 * 9 8 7 11 11 C 1.53777 * 113.61501 * 105.86174 * 9 8 7 12 12 C 1.54059 * 86.98575 * 89.16285 * 11 9 8 13 13 H 1.09000 * 113.68768 * 270.87364 * 12 11 9 14 14 C 1.52998 * 113.62109 * 139.97769 * 12 11 9 15 15 N 1.46500 * 109.47091 * 87.50418 * 14 12 11 16 16 C 1.34944 * 126.03830 * 125.00094 * 15 14 12 17 17 C 1.35320 * 107.74596 * 179.97438 * 16 15 14 18 18 C 1.39865 * 107.92165 * 359.97438 * 17 16 15 19 19 N 1.30842 * 108.20290 * 359.74278 * 18 17 16 20 20 C 1.53779 * 87.07507 * 25.43247 * 12 11 9 21 21 C 1.39343 * 120.56358 * 359.74929 * 7 6 5 22 22 F 1.35103 * 120.47285 * 180.27969 * 21 7 6 23 23 C 1.38438 * 119.05872 * 0.50207 * 21 7 6 24 24 H 0.96708 * 113.99846 * 299.99824 * 1 2 3 25 25 H 1.08999 * 109.46846 * 240.00250 * 2 1 3 26 26 H 1.48500 * 109.99738 * 178.68191 * 3 2 1 27 27 H 1.48497 * 110.00127 * 300.00341 * 3 2 1 28 28 H 1.08001 * 119.54529 * 0.04317 * 5 4 2 29 29 H 0.97001 * 120.00030 * 180.02562 * 8 7 6 30 30 H 1.09004 * 113.61260 * 203.66156 * 11 9 8 31 31 H 1.08993 * 113.61680 * 334.56965 * 11 9 8 32 32 H 1.08997 * 109.47403 * 207.50266 * 14 12 11 33 33 H 1.09000 * 109.47028 * 327.50833 * 14 12 11 34 34 H 1.07996 * 126.12617 * 359.97438 * 16 15 14 35 35 H 1.08006 * 126.03616 * 179.97438 * 17 16 15 36 36 H 1.07998 * 125.90080 * 179.97438 * 18 17 16 37 37 H 1.09004 * 113.61236 * 220.02647 * 20 12 11 38 38 H 1.09000 * 113.69289 * 89.13598 * 20 12 11 39 39 H 1.08002 * 120.76313 * 179.78600 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 1.2304 5 6 2.6386 -0.0202 2.1935 6 7 3.0844 -0.6313 3.2754 7 6 2.8732 -1.9214 3.4809 8 7 3.3609 -2.5248 4.6360 9 6 4.1040 -1.7321 5.6186 10 1 4.5846 -0.8573 5.1806 11 6 3.3015 -1.4208 6.8929 12 6 3.8509 -2.7420 7.4639 13 1 3.2295 -3.6086 7.2382 14 6 4.2378 -2.6571 8.9417 15 7 3.0661 -2.9499 9.7709 16 6 2.9888 -3.8957 10.7304 17 6 1.7443 -3.8457 11.2594 18 6 1.0371 -2.8344 10.6011 19 7 1.8303 -2.2928 9.7126 20 6 5.0406 -2.5703 6.5048 21 6 2.1617 -2.6796 2.5531 22 9 1.9424 -3.9953 2.7675 23 6 1.6868 -2.0664 1.4064 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 3.5346 1.7703 0.0321 27 1 1.5614 2.4679 -1.2084 28 1 2.8298 1.0343 2.0605 29 1 3.2088 -3.4703 4.7906 30 1 3.6521 -0.5362 7.4245 31 1 2.2222 -1.4246 6.7409 32 1 5.0234 -3.3824 9.1539 33 1 4.5997 -1.6536 9.1655 34 1 3.7786 -4.5714 11.0235 35 1 1.3643 -4.4755 12.0503 36 1 0.0142 -2.5474 10.7954 37 1 5.3643 -3.5014 6.0397 38 1 5.8666 -1.9997 6.9294 39 1 1.1351 -2.6285 0.6674 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14687810_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:42:44 Heat of formation + Delta-G solvation = 81.477539 kcal Electronic energy + Delta-G solvation = -24157.306624 eV Core-core repulsion = 20405.145527 eV Total energy + Delta-G solvation = -3752.161097 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.128 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -49.86950 -42.04565 -41.48989 -40.32659 -37.96885 -35.78279 -33.87158 -33.14500 -31.27887 -30.83907 -28.57070 -26.83318 -26.44393 -25.30881 -23.81101 -22.97975 -21.91138 -21.55594 -20.48219 -19.45067 -18.51035 -18.20398 -18.13277 -17.52546 -16.95738 -16.61248 -16.38425 -16.13601 -15.90578 -15.62939 -15.36808 -15.18075 -14.85767 -14.67429 -14.47121 -14.31094 -13.99023 -13.76536 -13.63052 -13.47749 -13.45114 -12.99063 -12.62123 -12.26297 -12.10867 -11.88752 -11.54313 -11.30055 -11.16534 -10.67256 -10.66258 -10.46111 -10.27430 -9.45888 -8.77805 -5.08787 -0.06990 0.11860 1.03452 1.22382 1.58377 1.60474 1.89966 1.93419 2.01757 2.54767 3.03974 3.19496 3.24594 3.39525 3.41830 3.57899 3.60099 3.71795 3.83147 3.94546 3.97188 3.98555 4.09139 4.26517 4.33554 4.39468 4.45930 4.56365 4.63703 4.68707 4.73064 4.75040 4.89897 4.95721 4.98487 5.10521 5.12258 5.16544 5.42944 5.79504 5.96425 6.12203 6.15478 6.52610 6.85067 6.94346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.684 3.316 4 C -0.210 4.210 5 C 0.149 3.851 6 N -0.510 5.510 7 C 0.394 3.606 8 N -0.699 5.699 9 C 0.133 3.867 10 H 0.109 0.891 11 C -0.133 4.133 12 C -0.122 4.122 13 H 0.093 0.907 14 C 0.142 3.858 15 N -0.372 5.372 16 C 0.049 3.951 17 C -0.275 4.275 18 C 0.041 3.959 19 N -0.289 5.289 20 C -0.141 4.141 21 C -0.020 4.020 22 F -0.134 7.134 23 C -0.037 4.037 24 H 0.380 0.620 25 H 0.115 0.885 26 H -0.254 1.254 27 H -0.251 1.251 28 H 0.163 0.837 29 H 0.412 0.588 30 H 0.092 0.908 31 H 0.075 0.925 32 H 0.097 0.903 33 H 0.087 0.913 34 H 0.172 0.828 35 H 0.146 0.854 36 H 0.182 0.818 37 H 0.077 0.923 38 H 0.101 0.899 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.356 0.433 2.602 3.537 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.166 4.166 3 Si 0.586 3.414 4 C -0.215 4.215 5 C -0.008 4.008 6 N -0.226 5.226 7 C 0.156 3.844 8 N -0.331 5.331 9 C 0.027 3.973 10 H 0.127 0.873 11 C -0.172 4.172 12 C -0.141 4.141 13 H 0.111 0.889 14 C 0.021 3.979 15 N -0.154 5.154 16 C -0.097 4.097 17 C -0.304 4.304 18 C -0.145 4.145 19 N -0.110 5.110 20 C -0.179 4.179 21 C -0.047 4.047 22 F -0.113 7.113 23 C -0.063 4.063 24 H 0.227 0.773 25 H 0.132 0.868 26 H -0.178 1.178 27 H -0.176 1.176 28 H 0.180 0.820 29 H 0.249 0.751 30 H 0.111 0.889 31 H 0.093 0.907 32 H 0.115 0.885 33 H 0.106 0.894 34 H 0.189 0.811 35 H 0.164 0.836 36 H 0.199 0.801 37 H 0.095 0.905 38 H 0.120 0.880 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.747 2.167 1.390 4.547 hybrid contribution -0.588 -2.564 0.124 2.634 sum 3.159 -0.397 1.514 3.526 Atomic orbital electron populations 1.86516 1.17058 1.81689 1.49303 1.24862 0.85247 1.09930 0.96606 0.94861 0.81150 0.77619 0.87798 1.20937 1.05752 0.94619 1.00202 1.22318 0.91696 0.99215 0.87562 1.67277 1.24920 1.07210 1.23218 1.18376 0.90362 0.88982 0.86728 1.44221 1.58942 1.11692 1.18276 1.21802 0.92577 0.95024 0.87936 0.87287 1.23470 1.01408 0.96642 0.95714 1.22947 0.98500 1.00213 0.92473 0.88900 1.21788 0.83827 1.03031 0.89267 1.48747 1.11031 1.26905 1.28740 1.22603 0.99676 0.94888 0.92504 1.21557 0.94608 1.06124 1.08140 1.23946 1.00083 0.95791 0.94700 1.77397 0.90693 1.19907 1.23025 1.23384 0.96828 1.01269 0.96447 1.18000 1.08577 0.79641 0.98458 1.91494 1.93581 1.31345 1.94866 1.21285 0.95551 0.94462 0.95050 0.77270 0.86753 1.17838 1.17589 0.82001 0.75116 0.88932 0.90653 0.88511 0.89436 0.81097 0.83587 0.80128 0.90472 0.88046 0.83321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.16 12.84 -35.23 -0.45 -0.30 16 2 C -0.05 0.05 2.82 36.01 0.10 0.15 16 3 Si 0.68 -1.25 29.83 -169.99 -5.07 -6.32 16 4 C -0.21 0.02 5.36 -104.47 -0.56 -0.54 16 5 C 0.15 0.00 9.84 -17.57 -0.17 -0.18 16 6 N -0.51 -0.85 9.15 -12.37 -0.11 -0.97 16 7 C 0.39 0.70 7.49 -154.86 -1.16 -0.46 16 8 N -0.70 -0.16 5.42 -53.06 -0.29 -0.44 16 9 C 0.13 -0.12 4.32 -67.12 -0.29 -0.41 16 10 H 0.11 -0.02 7.45 -51.93 -0.39 -0.40 16 11 C -0.13 0.06 7.45 -25.77 -0.19 -0.13 16 12 C -0.12 0.21 3.72 -89.66 -0.33 -0.13 16 13 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 14 C 0.14 -0.26 6.35 -4.04 -0.03 -0.28 16 15 N -0.37 -0.44 3.68 -61.37 -0.23 -0.66 16 16 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 17 C -0.27 -0.30 10.80 -40.01 -0.43 -0.73 16 18 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 19 N -0.29 -0.98 12.43 30.62 0.38 -0.60 16 20 C -0.14 0.41 7.38 -25.92 -0.19 0.22 16 21 C -0.02 -0.04 7.35 -39.10 -0.29 -0.33 16 22 F -0.13 -0.35 16.65 2.25 0.04 -0.32 16 23 C -0.04 -0.04 9.82 -39.26 -0.39 -0.42 16 24 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 25 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 26 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 27 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 28 H 0.16 -0.41 4.90 -52.49 -0.26 -0.67 16 29 H 0.41 -0.20 8.18 -40.82 -0.33 -0.53 16 30 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 31 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 32 H 0.10 -0.39 8.07 -51.93 -0.42 -0.81 16 33 H 0.09 -0.19 7.85 -51.93 -0.41 -0.60 16 34 H 0.17 -0.51 8.06 -52.49 -0.42 -0.93 16 35 H 0.15 -0.10 8.06 -52.48 -0.42 -0.52 16 36 H 0.18 -0.08 8.06 -52.49 -0.42 -0.50 16 37 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 38 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 39 H 0.15 0.01 8.06 -52.49 -0.42 -0.41 16 LS Contribution 336.14 15.07 5.07 5.07 Total: 0.00 -7.65 336.14 -9.81 -17.46 By element: Atomic # 1 Polarization: -4.56 SS G_CDS: -4.81 Total: -9.37 kcal Atomic # 6 Polarization: 0.80 SS G_CDS: -4.33 Total: -3.54 kcal Atomic # 7 Polarization: -2.43 SS G_CDS: -0.25 Total: -2.68 kcal Atomic # 8 Polarization: 0.16 SS G_CDS: -0.45 Total: -0.30 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.07 Total: -6.32 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -7.65 -9.81 -17.46 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687810_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.934 kcal (2) G-P(sol) polarization free energy of solvation -7.646 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.288 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.811 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.457 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.478 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds