Wall clock time and date at job start Mon Mar 8 2021 07:42:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.33325 * 125.95249 * 2 1 4 4 C 1.50700 * 122.71157 * 0.02562 * 3 2 1 5 5 O 1.42898 * 109.47252 * 113.53805 * 4 3 2 6 6 Si 1.86301 * 109.47207 * 233.53982 * 4 3 2 7 7 N 1.32121 * 114.58046 * 180.28950 * 3 2 1 8 8 C 1.29694 * 116.86528 * 359.48408 * 7 3 2 9 9 N 1.38606 * 124.94943 * 180.22708 * 8 7 3 10 10 C 1.46504 * 119.99833 * 180.27993 * 9 8 7 11 11 H 1.09003 * 112.84946 * 25.33439 * 10 9 8 12 12 C 1.53784 * 113.60974 * 156.52831 * 10 9 8 13 13 C 1.53782 * 87.08190 * 89.11591 * 12 10 9 14 14 H 1.08998 * 113.61040 * 270.88242 * 13 12 10 15 15 C 1.52992 * 113.61396 * 139.97579 * 13 12 10 16 16 N 1.46502 * 109.47110 * 174.99867 * 15 13 12 17 17 C 1.34429 * 126.81943 * 125.00096 * 16 15 13 18 18 N 1.30841 * 108.07560 * 179.97438 * 17 16 15 19 19 C 1.33245 * 109.82670 * 359.97438 * 18 17 16 20 20 N 1.30713 * 108.94772 * 359.75838 * 19 18 17 21 21 C 1.53774 * 113.61323 * 254.13446 * 10 9 8 22 22 S 1.70967 * 110.09919 * 0.49263 * 8 7 3 23 23 H 1.08999 * 109.47087 * 84.87137 * 1 2 3 24 24 H 1.09000 * 109.47104 * 204.87063 * 1 2 3 25 25 H 1.08997 * 109.46926 * 324.86650 * 1 2 3 26 26 H 1.09003 * 109.46741 * 353.53846 * 4 3 2 27 27 H 0.96697 * 114.00354 * 59.99857 * 5 4 3 28 28 H 1.48493 * 109.99986 * 58.67780 * 6 4 3 29 29 H 1.48503 * 109.99721 * 179.97438 * 6 4 3 30 30 H 0.97002 * 119.99823 * 0.27554 * 9 8 7 31 31 H 1.09000 * 113.60563 * 203.66495 * 12 10 9 32 32 H 1.08999 * 113.61895 * 334.56195 * 12 10 9 33 33 H 1.08996 * 109.47574 * 295.00222 * 15 13 12 34 34 H 1.09004 * 109.47426 * 55.00376 * 15 13 12 35 35 H 1.07999 * 125.96928 * 0.02562 * 17 16 15 36 36 H 1.07996 * 125.52629 * 179.97438 * 19 18 17 37 37 H 1.09002 * 113.61432 * 25.42875 * 21 10 9 38 38 H 1.08999 * 113.61728 * 156.33988 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 0.0006 5 8 2.0697 3.1221 1.2358 6 14 2.4872 3.4416 -1.4121 7 7 3.5850 0.8188 -0.0061 8 6 3.9315 -0.4310 -0.0008 9 7 5.2384 -0.8927 -0.0012 10 6 5.5065 -2.3330 -0.0011 11 1 4.6912 -2.9153 -0.4304 12 6 6.8897 -2.7021 -0.5628 13 6 7.4257 -2.5482 0.8703 14 1 7.7509 -1.5354 1.1083 15 6 8.4563 -3.6109 1.2566 16 7 8.9919 -3.3110 2.5868 17 6 9.0097 -4.1311 3.6518 18 7 9.5713 -3.4928 4.6463 19 6 9.9240 -2.2686 4.2561 20 7 9.5949 -2.1120 3.0008 21 6 5.9985 -2.8678 1.3541 22 16 2.5413 -1.4261 -0.0006 23 1 -0.3633 0.0919 -1.0235 24 1 -0.3633 -0.9324 0.4322 25 1 -0.3633 0.8404 0.5914 26 1 0.6580 2.4498 -0.1147 27 1 3.0196 3.1868 1.4049 28 1 2.1799 2.7696 -2.7001 29 1 1.9540 4.8275 -1.4229 30 1 5.9755 -0.2621 -0.0017 31 1 6.9482 -3.7217 -0.9437 32 1 7.2888 -1.9652 -1.2598 33 1 7.9801 -4.5912 1.2692 34 1 9.2684 -3.6108 0.5295 35 1 8.6278 -5.1409 3.6812 36 1 10.4069 -1.5273 4.8754 37 1 5.6787 -2.2645 2.2038 38 1 5.8140 -3.9326 1.4964 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14687812_15704122.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:42:54 Heat of formation + Delta-G solvation = 140.374054 kcal Electronic energy + Delta-G solvation = -22396.031278 eV Core-core repulsion = 18984.066818 eV Total energy + Delta-G solvation = -3411.964460 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.105 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -43.01945 -41.25347 -40.63538 -37.52923 -36.07693 -34.53908 -32.77043 -32.14915 -29.50576 -28.65484 -27.10884 -25.80410 -24.85556 -24.33988 -22.98243 -22.61455 -20.89723 -20.50001 -18.87834 -18.47792 -17.85227 -17.61295 -17.00617 -16.79515 -16.37651 -16.05336 -15.83919 -15.55570 -15.26812 -15.21802 -15.07535 -14.35082 -14.13335 -14.05045 -13.97829 -13.79464 -13.54965 -13.47207 -13.09169 -12.76663 -12.42695 -12.36842 -12.03007 -11.81650 -11.69640 -11.10031 -10.94177 -10.74942 -10.66345 -10.58864 -10.39008 -10.00532 -8.69106 -4.82687 -0.02858 0.14140 0.65555 0.74122 1.27144 1.34174 1.74476 1.74899 1.91162 2.03832 2.08135 3.01719 3.13665 3.18818 3.36552 3.38237 3.41830 3.64977 3.67353 3.88826 3.97290 4.01028 4.10244 4.17232 4.22724 4.30286 4.34646 4.42878 4.44588 4.59046 4.66500 4.71432 4.84680 4.89415 4.94947 5.17937 5.26137 5.46398 5.55037 5.79192 6.20923 6.61629 6.89515 7.12352 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C -0.247 4.247 3 C 0.074 3.926 4 C -0.033 4.033 5 O -0.536 6.536 6 Si 0.709 3.291 7 N -0.539 5.539 8 C 0.321 3.679 9 N -0.676 5.676 10 C 0.128 3.872 11 H 0.098 0.902 12 C -0.133 4.133 13 C -0.123 4.123 14 H 0.108 0.892 15 C 0.138 3.862 16 N -0.378 5.378 17 C 0.253 3.747 18 N -0.547 5.547 19 C 0.199 3.801 20 N -0.318 5.318 21 C -0.152 4.152 22 S 0.105 5.895 23 H 0.073 0.927 24 H 0.070 0.930 25 H 0.080 0.920 26 H 0.119 0.881 27 H 0.383 0.617 28 H -0.261 1.261 29 H -0.251 1.251 30 H 0.414 0.586 31 H 0.105 0.895 32 H 0.085 0.915 33 H 0.104 0.896 34 H 0.093 0.907 35 H 0.218 0.782 36 H 0.217 0.783 37 H 0.077 0.923 38 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.986 -5.161 -2.932 6.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.370 4.370 3 C -0.057 4.057 4 C -0.146 4.146 5 O -0.342 6.342 6 Si 0.610 3.390 7 N -0.265 5.265 8 C -0.050 4.050 9 N -0.316 5.316 10 C 0.021 3.979 11 H 0.116 0.884 12 C -0.172 4.172 13 C -0.142 4.142 14 H 0.126 0.874 15 C 0.016 3.984 16 N -0.169 5.169 17 C -0.044 4.044 18 N -0.274 5.274 19 C -0.104 4.104 20 N -0.146 5.146 21 C -0.192 4.192 22 S 0.354 5.646 23 H 0.091 0.909 24 H 0.089 0.911 25 H 0.098 0.902 26 H 0.136 0.864 27 H 0.230 0.770 28 H -0.185 1.185 29 H -0.176 1.176 30 H 0.253 0.747 31 H 0.123 0.877 32 H 0.104 0.896 33 H 0.123 0.877 34 H 0.111 0.889 35 H 0.234 0.766 36 H 0.233 0.767 37 H 0.095 0.905 38 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 0.614 -5.037 -3.807 6.344 hybrid contribution -0.367 0.304 0.247 0.537 sum 0.247 -4.733 -3.561 5.928 Atomic orbital electron populations 1.20198 0.86945 1.03385 1.02700 1.25127 1.01146 0.93294 1.17413 1.20074 0.86889 0.97171 1.01521 1.24733 1.02958 0.89791 0.97140 1.86468 1.29931 1.79556 1.38196 0.93786 0.91379 0.78606 0.75272 1.65953 1.17050 1.16564 1.26923 1.23231 0.91600 0.91611 0.98578 1.43537 1.01882 1.06082 1.80103 1.21876 0.98397 0.80100 0.97489 0.88395 1.23333 0.94003 1.03739 0.96078 1.23004 0.93924 1.00536 0.96695 0.87427 1.21898 0.97225 0.99222 0.80022 1.50555 1.44211 1.10513 1.11621 1.26108 0.96910 0.98604 0.82768 1.70574 1.19794 1.06792 1.30195 1.26059 0.98740 0.94516 0.91038 1.78032 1.17932 1.03640 1.14954 1.23707 0.95197 1.02238 0.98009 1.83905 0.96485 1.10255 1.73973 0.90882 0.91139 0.90184 0.86396 0.76960 1.18543 1.17613 0.74680 0.87654 0.89634 0.87736 0.88899 0.76603 0.76681 0.90467 0.88449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.01 9.71 36.00 0.35 0.35 16 2 C -0.25 -0.48 6.57 -36.03 -0.24 -0.72 16 3 C 0.07 0.19 5.20 -84.18 -0.44 -0.25 16 4 C -0.03 -0.06 2.84 36.01 0.10 0.04 16 5 O -0.54 -1.31 12.88 -35.23 -0.45 -1.76 16 6 Si 0.71 0.86 32.61 -169.99 -5.54 -4.68 16 7 N -0.54 -1.28 9.76 -11.36 -0.11 -1.39 16 8 C 0.32 0.35 8.24 -87.68 -0.72 -0.37 16 9 N -0.68 0.99 5.42 -54.99 -0.30 0.69 16 10 C 0.13 -0.46 4.28 -67.12 -0.29 -0.75 16 11 H 0.10 -0.36 7.11 -51.93 -0.37 -0.73 16 12 C -0.13 0.70 7.38 -25.92 -0.19 0.51 16 13 C -0.12 0.49 3.77 -89.67 -0.34 0.15 16 14 H 0.11 -0.19 8.01 -51.93 -0.42 -0.60 16 15 C 0.14 -0.59 6.39 -4.04 -0.03 -0.62 16 16 N -0.38 0.25 3.69 -62.63 -0.23 0.02 16 17 C 0.25 -0.16 12.63 -90.65 -1.14 -1.30 16 18 N -0.55 -1.36 11.19 -15.83 -0.18 -1.54 16 19 C 0.20 0.37 13.03 -91.81 -1.20 -0.83 16 20 N -0.32 -0.67 12.46 29.29 0.37 -0.30 16 21 C -0.15 0.57 7.45 -25.78 -0.19 0.38 16 22 S 0.10 0.06 21.71 -107.50 -2.33 -2.27 16 23 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.08 -0.02 7.17 -51.93 -0.37 -0.39 16 26 H 0.12 0.13 6.33 -51.93 -0.33 -0.20 16 27 H 0.38 -0.09 8.70 45.56 0.40 0.30 16 28 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 29 H -0.25 -0.84 7.11 56.52 0.40 -0.44 16 30 H 0.41 -0.80 8.83 -40.82 -0.36 -1.16 16 31 H 0.11 -0.73 8.10 -51.93 -0.42 -1.15 16 32 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 33 H 0.10 -0.74 7.79 -51.93 -0.40 -1.15 16 34 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 35 H 0.22 -1.09 8.06 -52.49 -0.42 -1.51 16 36 H 0.22 -0.23 8.06 -52.49 -0.42 -0.65 16 37 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.10 -0.51 7.90 -51.93 -0.41 -0.92 16 LS Contribution 338.19 15.07 5.10 5.10 Total: 0.00 -9.04 338.19 -12.85 -21.89 By element: Atomic # 1 Polarization: -7.50 SS G_CDS: -4.84 Total: -12.35 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: -4.32 Total: -3.39 kcal Atomic # 7 Polarization: -2.07 SS G_CDS: -0.45 Total: -2.52 kcal Atomic # 8 Polarization: -1.31 SS G_CDS: -0.45 Total: -1.76 kcal Atomic # 14 Polarization: 0.86 SS G_CDS: -5.54 Total: -4.68 kcal Atomic # 16 Polarization: 0.06 SS G_CDS: -2.33 Total: -2.27 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -9.04 -12.85 -21.89 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687812_15704122.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 162.262 kcal (2) G-P(sol) polarization free energy of solvation -9.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 153.224 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.850 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.888 kcal (6) G-S(sol) free energy of system = (1) + (5) 140.374 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds