Wall clock time and date at job start Mon Mar 8 2021 07:42:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86304 * 109.46725 * 2 1 4 4 C 1.50699 * 109.47184 * 119.99892 * 2 1 3 5 5 C 1.38610 * 120.72162 * 244.72377 * 4 2 1 6 6 N 1.32273 * 119.19497 * 179.78512 * 5 4 2 7 7 C 1.32491 * 120.74472 * 0.47519 * 6 5 4 8 8 N 1.38406 * 119.21907 * 179.75189 * 7 6 5 9 9 C 1.46501 * 119.99969 * 0.02562 * 8 7 6 10 10 H 1.08999 * 112.85131 * 334.67034 * 9 8 7 11 11 C 1.53778 * 113.60997 * 105.86530 * 9 8 7 12 12 C 1.54047 * 86.98630 * 89.16234 * 11 9 8 13 13 H 1.09001 * 113.69047 * 270.86947 * 12 11 9 14 14 C 1.53004 * 113.61851 * 139.98025 * 12 11 9 15 15 N 1.46498 * 109.47545 * 87.50479 * 14 12 11 16 16 C 1.36881 * 126.39469 * 269.71360 * 15 14 12 17 17 C 1.34671 * 106.81479 * 179.84123 * 16 15 14 18 18 N 1.34130 * 108.01815 * 0.41968 * 17 16 15 19 19 C 1.30495 * 109.25933 * 359.73092 * 18 17 16 20 20 C 1.53781 * 113.61443 * 203.47211 * 9 8 7 21 21 N 1.32497 * 121.56277 * 359.77717 * 7 6 5 22 22 C 1.32276 * 120.74164 * 359.97390 * 21 7 6 23 23 H 0.96700 * 114.00234 * 299.99899 * 1 2 3 24 24 H 1.09002 * 109.47382 * 239.99890 * 2 1 3 25 25 H 1.48499 * 109.99644 * 178.68105 * 3 2 1 26 26 H 1.48492 * 110.00078 * 299.99611 * 3 2 1 27 27 H 1.08002 * 120.39678 * 359.97438 * 5 4 2 28 28 H 0.96998 * 119.99819 * 180.02562 * 8 7 6 29 29 H 1.09008 * 113.61510 * 203.66489 * 11 9 8 30 30 H 1.09006 * 113.61767 * 334.56406 * 11 9 8 31 31 H 1.09003 * 109.46571 * 207.50472 * 14 12 11 32 32 H 1.09001 * 109.46746 * 327.50118 * 14 12 11 33 33 H 1.08001 * 126.59363 * 359.97438 * 16 15 14 34 34 H 1.08001 * 125.98940 * 180.12306 * 17 16 15 35 35 H 1.08002 * 125.65116 * 179.97438 * 19 18 17 36 36 H 1.08999 * 113.61628 * 25.43429 * 20 9 8 37 37 H 1.09000 * 113.61317 * 156.25439 * 20 9 8 38 38 H 1.08000 * 120.40104 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6471 -0.0262 2.2005 6 7 3.0700 -0.6787 3.2706 7 6 2.8245 -1.9725 3.4160 8 7 3.2862 -2.6250 4.5458 9 6 4.0363 -1.8852 5.5639 10 1 4.5387 -1.0048 5.1631 11 6 3.2282 -1.6049 6.8418 12 6 3.7449 -2.9575 7.3678 13 1 3.1081 -3.8020 7.1044 14 6 4.1195 -2.9358 8.8511 15 7 2.9342 -3.2348 9.6585 16 6 2.0398 -2.3257 10.1558 17 6 1.1085 -3.0252 10.8318 18 7 1.4308 -4.3251 10.7574 19 6 2.5232 -4.4582 10.0561 20 6 4.9470 -2.7751 6.4261 21 7 2.1478 -2.6566 2.5051 22 6 1.6926 -2.0633 1.4140 23 1 -0.3933 0.4417 0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 3.5345 1.7704 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 2.8543 1.0275 2.0854 28 1 3.1133 -3.5721 4.6636 29 1 3.5918 -0.7481 7.4093 30 1 2.1504 -1.5804 6.6805 31 1 4.8880 -3.6847 9.0427 32 1 4.4997 -1.9491 9.1154 33 1 2.0732 -1.2538 10.0284 34 1 0.2547 -2.6116 11.3479 35 1 3.0171 -5.3920 9.8313 36 1 5.2560 -3.6948 5.9293 37 1 5.7805 -2.2380 6.8788 38 1 1.1421 -2.6264 0.6750 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_14687814_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:42:59 Heat of formation + Delta-G solvation = 130.294008 kcal Electronic energy + Delta-G solvation = -21867.571915 eV Core-core repulsion = 18521.555723 eV Total energy + Delta-G solvation = -3346.016191 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 288.133 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.93800 -42.16348 -40.40963 -38.00973 -35.94874 -34.79066 -34.36610 -32.02805 -30.40591 -28.77921 -26.78460 -26.50649 -25.94110 -24.07389 -23.21023 -22.24172 -21.78239 -20.47363 -19.58439 -18.54681 -18.27332 -17.99829 -16.72999 -16.54280 -16.46631 -16.07738 -15.81487 -15.59685 -15.45450 -14.96158 -14.89701 -14.67640 -14.51398 -14.19622 -14.09955 -13.77654 -13.44619 -13.17909 -12.85568 -12.30252 -12.26886 -11.94280 -11.85036 -11.80236 -11.35161 -11.18473 -10.90926 -10.56372 -10.44079 -10.06766 -9.43718 -9.14073 -4.99935 0.01302 0.09557 1.17009 1.31304 1.63963 1.75641 1.94625 1.98935 2.23748 2.74509 3.11143 3.41846 3.50988 3.52798 3.60333 3.66966 3.73566 3.79913 3.82865 3.89580 4.06088 4.18512 4.21138 4.28389 4.53676 4.54543 4.60114 4.67352 4.75290 4.77791 4.80551 4.83894 5.01404 5.03455 5.13526 5.34564 5.38672 5.77080 5.84012 6.01010 6.33106 6.34638 6.76966 7.17174 7.22321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.049 4.049 3 Si 0.770 3.230 4 C -0.287 4.287 5 C 0.196 3.804 6 N -0.572 5.572 7 C 0.553 3.447 8 N -0.677 5.677 9 C 0.130 3.870 10 H 0.103 0.897 11 C -0.141 4.141 12 C -0.120 4.120 13 H 0.082 0.918 14 C 0.111 3.889 15 N -0.452 5.452 16 C -0.044 4.044 17 C -0.069 4.069 18 N -0.546 5.546 19 C 0.171 3.829 20 C -0.121 4.121 21 N -0.594 5.594 22 C 0.210 3.790 23 H 0.394 0.606 24 H 0.113 0.887 25 H -0.282 1.282 26 H -0.297 1.297 27 H 0.191 0.809 28 H 0.415 0.585 29 H 0.110 0.890 30 H 0.047 0.953 31 H 0.115 0.885 32 H 0.114 0.886 33 H 0.198 0.802 34 H 0.170 0.830 35 H 0.226 0.774 36 H 0.081 0.919 37 H 0.124 0.876 38 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.675 4.363 -0.029 6.395 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.161 4.161 3 Si 0.676 3.324 4 C -0.295 4.295 5 C 0.029 3.971 6 N -0.295 5.295 7 C 0.197 3.803 8 N -0.312 5.312 9 C 0.024 3.976 10 H 0.121 0.879 11 C -0.180 4.180 12 C -0.139 4.139 13 H 0.101 0.899 14 C -0.010 4.010 15 N -0.133 5.133 16 C -0.178 4.178 17 C -0.216 4.216 18 N -0.266 5.266 19 C -0.112 4.112 20 C -0.160 4.160 21 N -0.316 5.316 22 C 0.043 3.957 23 H 0.244 0.756 24 H 0.130 0.870 25 H -0.208 1.208 26 H -0.224 1.224 27 H 0.208 0.792 28 H 0.253 0.747 29 H 0.128 0.872 30 H 0.066 0.934 31 H 0.133 0.867 32 H 0.132 0.868 33 H 0.215 0.785 34 H 0.188 0.812 35 H 0.242 0.758 36 H 0.099 0.901 37 H 0.142 0.858 38 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 5.381 3.642 0.276 6.503 hybrid contribution -0.274 -0.163 -1.339 1.376 sum 5.107 3.479 -1.063 6.270 Atomic orbital electron populations 1.86483 1.17273 1.82096 1.50434 1.24846 0.85101 1.10333 0.95789 0.93956 0.77900 0.74964 0.85602 1.21784 1.08538 0.97354 1.01845 1.23217 0.87608 1.00233 0.86088 1.67947 1.27535 1.08148 1.25835 1.19622 0.87392 0.85983 0.87339 1.43932 1.58053 1.11882 1.17353 1.21897 0.92958 0.96085 0.86616 0.87922 1.23585 0.99708 0.97836 0.96892 1.22966 0.98933 0.98591 0.93393 0.89939 1.22235 0.84701 1.05480 0.88578 1.45756 1.21847 1.06777 1.38962 1.23093 0.93542 0.97584 1.03571 1.22621 1.02889 0.89560 1.06511 1.70232 1.14810 1.20860 1.20656 1.25468 0.95120 0.91030 0.99537 1.23325 0.96626 1.00760 0.95277 1.67987 1.17494 1.40825 1.05297 1.23128 0.89255 0.91824 0.91468 0.75564 0.86968 1.20845 1.22432 0.79235 0.74672 0.87174 0.93370 0.86686 0.86818 0.78531 0.81228 0.75807 0.90079 0.85793 0.80319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.21 12.85 -148.98 -1.91 -0.71 16 2 C -0.05 0.16 2.83 71.24 0.20 0.36 16 3 Si 0.77 -3.80 29.88 68.60 2.05 -1.75 16 4 C -0.29 0.28 5.36 -19.69 -0.11 0.17 16 5 C 0.20 -0.19 9.92 84.72 0.84 0.65 16 6 N -0.57 -1.75 9.15 -197.98 -1.81 -3.56 16 7 C 0.55 2.46 8.43 261.49 2.20 4.66 16 8 N -0.68 0.19 5.41 -327.93 -1.77 -1.58 16 9 C 0.13 -0.64 4.30 45.52 0.20 -0.45 16 10 H 0.10 -0.31 7.41 -2.39 -0.02 -0.33 16 11 C -0.14 0.87 7.45 31.21 0.23 1.11 16 12 C -0.12 1.03 3.86 -10.17 -0.04 0.99 16 13 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 14 C 0.11 -1.07 5.99 86.38 0.52 -0.55 16 15 N -0.45 0.80 2.75 -529.06 -1.46 -0.66 16 16 C -0.04 -0.03 11.58 83.09 0.96 0.94 16 17 C -0.07 -0.46 11.87 83.52 0.99 0.53 16 18 N -0.55 -5.72 11.25 -200.31 -2.25 -7.97 16 19 C 0.17 0.49 12.56 180.26 2.26 2.75 16 20 C -0.12 1.26 7.38 31.12 0.23 1.49 16 21 N -0.59 -3.46 10.46 -197.99 -2.07 -5.53 16 22 C 0.21 0.47 10.99 84.71 0.93 1.40 16 23 H 0.39 -3.81 8.70 -74.06 -0.64 -4.46 16 24 H 0.11 -0.30 7.96 -2.39 -0.02 -0.32 16 25 H -0.28 0.11 7.11 99.48 0.71 0.81 16 26 H -0.30 -0.88 7.11 99.48 0.71 -0.17 16 27 H 0.19 -1.35 5.07 -2.91 -0.01 -1.37 16 28 H 0.42 -0.60 8.82 -92.71 -0.82 -1.41 16 29 H 0.11 -1.02 7.90 -2.38 -0.02 -1.04 16 30 H 0.05 -0.02 8.14 -2.38 -0.02 -0.04 16 31 H 0.11 -1.47 8.14 -2.39 -0.02 -1.49 16 32 H 0.11 -1.44 7.85 -2.39 -0.02 -1.46 16 33 H 0.20 -1.12 8.06 -2.91 -0.02 -1.14 16 34 H 0.17 0.68 8.06 -2.91 -0.02 0.66 16 35 H 0.23 -0.88 8.06 -2.91 -0.02 -0.91 16 36 H 0.08 -0.79 8.14 -2.39 -0.02 -0.81 16 37 H 0.12 -1.74 8.10 -2.39 -0.02 -1.76 16 38 H 0.18 -0.18 8.06 -2.91 -0.02 -0.20 16 Total: 0.00 -23.47 325.09 -0.13 -23.60 By element: Atomic # 1 Polarization: -15.55 SS G_CDS: -0.33 Total: -15.88 kcal Atomic # 6 Polarization: 4.62 SS G_CDS: 9.43 Total: 14.04 kcal Atomic # 7 Polarization: -9.94 SS G_CDS: -9.37 Total: -19.31 kcal Atomic # 8 Polarization: 1.21 SS G_CDS: -1.91 Total: -0.71 kcal Atomic # 14 Polarization: -3.80 SS G_CDS: 2.05 Total: -1.75 kcal Total: -23.47 -0.13 -23.60 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687814_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 153.896 kcal (2) G-P(sol) polarization free energy of solvation -23.469 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 130.427 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.602 kcal (6) G-S(sol) free energy of system = (1) + (5) 130.294 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds