Wall clock time and date at job start Mon Mar 8 2021 07:43:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86293 * 109.47282 * 2 1 4 4 C 1.50703 * 109.47536 * 120.00517 * 2 1 3 5 5 C 1.37985 * 120.32472 * 245.01988 * 4 2 1 6 6 N 1.32004 * 120.89885 * 179.71800 * 5 4 2 7 7 C 1.32342 * 121.64663 * 0.52493 * 6 5 4 8 8 N 1.39143 * 119.71666 * 179.75527 * 7 6 5 9 9 C 1.46502 * 120.00042 * 359.72345 * 8 7 6 10 10 H 1.09000 * 112.84885 * 23.80602 * 9 8 7 11 11 C 1.53777 * 113.61270 * 155.00302 * 9 8 7 12 12 C 1.53775 * 87.08312 * 89.20090 * 11 9 8 13 13 H 1.09001 * 113.61557 * 270.79833 * 12 11 9 14 14 C 1.52998 * 113.61822 * 139.97926 * 12 11 9 15 15 N 1.46500 * 109.47471 * 174.99777 * 14 12 11 16 16 C 1.36883 * 126.40270 * 270.00215 * 15 14 12 17 17 C 1.34666 * 106.81734 * 180.02562 * 16 15 14 18 18 N 1.34126 * 108.02240 * 359.97438 * 17 16 15 19 19 C 1.30494 * 109.25549 * 0.02562 * 18 17 16 20 20 C 1.53777 * 113.69081 * 252.53626 * 9 8 7 21 21 C 1.39343 * 120.56338 * 359.48024 * 7 6 5 22 22 F 1.35091 * 120.47148 * 180.27638 * 21 7 6 23 23 C 1.38441 * 119.05570 * 0.24713 * 21 7 6 24 24 H 0.96702 * 113.99937 * 59.99650 * 1 2 3 25 25 H 1.09011 * 109.47170 * 240.00070 * 2 1 3 26 26 H 1.48503 * 110.00273 * 298.68293 * 3 2 1 27 27 H 1.48499 * 110.00157 * 60.00487 * 3 2 1 28 28 H 1.08001 * 119.55034 * 359.97438 * 5 4 2 29 29 H 0.97002 * 119.99838 * 179.72829 * 8 7 6 30 30 H 1.09008 * 113.61462 * 334.65142 * 11 9 8 31 31 H 1.09000 * 113.69211 * 203.76125 * 11 9 8 32 32 H 1.09008 * 109.46958 * 54.99892 * 14 12 11 33 33 H 1.09002 * 109.47241 * 295.00722 * 14 12 11 34 34 H 1.08001 * 126.58630 * 0.05386 * 16 15 14 35 35 H 1.07999 * 125.98413 * 180.02562 * 17 16 15 36 36 H 1.08006 * 125.64795 * 180.26456 * 19 18 17 37 37 H 1.09006 * 113.61692 * 156.32415 * 20 9 8 38 38 H 1.09000 * 113.61820 * 25.42559 * 20 9 8 39 39 H 1.08001 * 120.75865 * 180.02562 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6379 -0.0202 2.1939 6 7 3.0785 -0.6300 3.2786 7 6 2.8719 -1.9213 3.4815 8 7 3.3587 -2.5244 4.6371 9 6 4.1016 -1.7317 5.6199 10 1 3.8676 -0.6683 5.5700 11 6 4.0471 -2.3084 7.0444 12 6 5.2994 -3.1224 6.6784 13 1 5.0753 -4.0938 6.2376 14 6 6.3282 -3.2056 7.8078 15 7 7.4219 -4.0944 7.4077 16 6 7.4876 -5.4458 7.6150 17 6 8.6566 -5.8636 7.0932 18 7 9.2872 -4.7966 6.5806 19 6 8.5537 -3.7333 6.7655 20 6 5.6100 -2.0301 5.6414 21 6 2.1661 -2.6809 2.5506 22 9 1.9515 -3.9977 2.7624 23 6 1.6874 -2.0666 1.4060 24 1 -0.3933 0.4418 -0.7650 25 1 1.7924 -0.5139 -0.8901 26 1 1.5879 2.4586 -1.2242 27 1 1.5616 2.4678 1.2085 28 1 2.8295 1.0343 2.0607 29 1 3.2062 -3.4698 4.7919 30 1 3.1668 -2.9228 7.2334 31 1 4.2209 -1.5668 7.8241 32 1 5.8509 -3.5982 8.7058 33 1 6.7244 -2.2110 8.0123 34 1 6.7445 -6.0591 8.1030 35 1 9.0218 -6.8800 7.0876 36 1 8.8074 -2.7312 6.4524 37 1 6.2116 -1.2114 6.0364 38 1 5.9916 -2.4198 4.6977 39 1 1.1366 -2.6290 0.6665 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14687814_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:43:09 Heat of formation + Delta-G solvation = 67.801919 kcal Electronic energy + Delta-G solvation = -24131.782861 eV Core-core repulsion = 20379.028745 eV Total energy + Delta-G solvation = -3752.754116 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.128 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -49.88473 -42.92213 -41.52828 -40.44763 -38.06322 -36.03452 -34.44971 -33.22007 -31.37304 -30.31831 -28.88138 -26.96504 -26.47238 -25.34703 -23.83351 -22.87095 -22.18148 -21.79982 -20.54384 -19.49085 -18.68997 -18.40549 -18.17662 -18.02379 -16.92226 -16.75528 -16.57810 -16.27439 -15.76251 -15.60631 -15.25062 -15.08031 -15.05132 -14.77861 -14.64543 -14.26181 -14.24001 -14.02197 -13.82586 -13.79942 -13.59672 -13.13105 -12.62366 -12.47735 -12.07060 -12.00557 -11.52705 -11.25535 -10.79987 -10.73363 -10.72038 -10.50046 -10.42966 -9.37974 -8.80829 -5.05340 -0.07556 0.11201 1.17046 1.18302 1.50595 1.83279 1.85496 1.86727 2.36379 2.49364 3.03258 3.11301 3.19991 3.26297 3.34120 3.51117 3.59957 3.62001 3.83654 3.85716 3.88351 3.98924 4.01928 4.05915 4.21816 4.26579 4.45460 4.48115 4.49815 4.60154 4.66352 4.68464 4.79045 4.85843 4.87691 4.97948 5.00899 5.36647 5.38998 5.88183 5.92003 6.12286 6.29686 6.34888 6.92008 7.24102 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.064 4.064 3 Si 0.681 3.319 4 C -0.160 4.160 5 C 0.150 3.850 6 N -0.509 5.509 7 C 0.392 3.608 8 N -0.701 5.701 9 C 0.136 3.864 10 H 0.111 0.889 11 C -0.140 4.140 12 C -0.130 4.130 13 H 0.095 0.905 14 C 0.114 3.886 15 N -0.457 5.457 16 C -0.059 4.059 17 C -0.030 4.030 18 N -0.497 5.497 19 C 0.183 3.817 20 C -0.148 4.148 21 C -0.019 4.019 22 F -0.134 7.134 23 C -0.037 4.037 24 H 0.381 0.619 25 H 0.078 0.922 26 H -0.257 1.257 27 H -0.251 1.251 28 H 0.164 0.836 29 H 0.412 0.588 30 H 0.078 0.922 31 H 0.102 0.898 32 H 0.093 0.907 33 H 0.097 0.903 34 H 0.172 0.828 35 H 0.168 0.832 36 H 0.202 0.798 37 H 0.095 0.905 38 H 0.074 0.926 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.370 2.768 0.180 3.094 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.174 4.174 3 Si 0.582 3.418 4 C -0.165 4.165 5 C -0.007 4.007 6 N -0.225 5.225 7 C 0.154 3.846 8 N -0.333 5.333 9 C 0.030 3.970 10 H 0.129 0.871 11 C -0.178 4.178 12 C -0.149 4.149 13 H 0.114 0.886 14 C -0.009 4.009 15 N -0.140 5.140 16 C -0.192 4.192 17 C -0.178 4.178 18 N -0.214 5.214 19 C -0.099 4.099 20 C -0.187 4.187 21 C -0.045 4.045 22 F -0.112 7.112 23 C -0.063 4.063 24 H 0.230 0.770 25 H 0.096 0.904 26 H -0.182 1.182 27 H -0.175 1.175 28 H 0.181 0.819 29 H 0.249 0.751 30 H 0.096 0.904 31 H 0.120 0.880 32 H 0.112 0.888 33 H 0.116 0.884 34 H 0.189 0.811 35 H 0.186 0.814 36 H 0.218 0.782 37 H 0.113 0.887 38 H 0.093 0.907 39 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -0.289 3.906 1.165 4.086 hybrid contribution -2.545 -1.400 -0.680 2.983 sum -2.834 2.506 0.485 3.814 Atomic orbital electron populations 1.86594 1.17781 1.80184 1.49909 1.24575 0.84481 1.10882 0.97469 0.95124 0.91531 0.74379 0.80811 1.19829 1.04382 0.93698 0.98572 1.22336 0.91862 0.99415 0.87124 1.67304 1.25161 1.07166 1.22919 1.18370 0.90437 0.88986 0.86842 1.44181 1.58866 1.11722 1.18527 1.21725 0.91161 0.96969 0.87136 0.87068 1.23378 0.97504 0.99883 0.97073 1.23057 0.95610 0.99642 0.96588 0.88626 1.21967 0.86414 0.94548 0.97959 1.45582 1.16931 1.07727 1.43763 1.22745 1.02593 0.84105 1.09730 1.22346 0.93533 0.98701 1.03186 1.70316 1.30690 0.98404 1.22037 1.24997 0.84415 1.00312 1.00173 1.23569 0.97241 0.98241 0.99600 1.17961 1.08642 0.79553 0.98370 1.91490 1.93654 1.31207 1.94894 1.21272 0.95335 0.94518 0.95198 0.77035 0.90357 1.18225 1.17527 0.81899 0.75081 0.90373 0.88000 0.88839 0.88449 0.81070 0.81433 0.78160 0.88679 0.90744 0.83371 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.10 12.82 -35.23 -0.45 -0.56 16 2 C -0.06 0.07 2.81 36.01 0.10 0.18 16 3 Si 0.68 -1.43 29.88 -169.99 -5.08 -6.51 16 4 C -0.16 -0.08 5.39 -104.47 -0.56 -0.64 16 5 C 0.15 0.08 9.84 -17.57 -0.17 -0.10 16 6 N -0.51 -0.84 9.13 -12.36 -0.11 -0.96 16 7 C 0.39 0.61 7.49 -154.85 -1.16 -0.55 16 8 N -0.70 0.31 5.42 -53.06 -0.29 0.02 16 9 C 0.14 -0.27 4.35 -67.12 -0.29 -0.56 16 10 H 0.11 -0.11 7.40 -51.93 -0.38 -0.50 16 11 C -0.14 0.55 7.39 -25.92 -0.19 0.35 16 12 C -0.13 0.44 3.84 -89.81 -0.35 0.10 16 13 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 14 C 0.11 -0.40 5.99 -4.04 -0.02 -0.42 16 15 N -0.46 0.12 2.75 -118.57 -0.33 -0.21 16 16 C -0.06 -0.04 11.58 -16.56 -0.19 -0.23 16 17 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 18 N -0.50 -2.32 11.25 -14.67 -0.16 -2.49 16 19 C 0.18 0.28 12.56 -90.38 -1.14 -0.86 16 20 C -0.15 0.39 7.43 -25.92 -0.19 0.20 16 21 C -0.02 -0.04 7.35 -39.10 -0.29 -0.32 16 22 F -0.13 -0.32 16.65 2.25 0.04 -0.28 16 23 C -0.04 -0.04 9.82 -39.26 -0.39 -0.43 16 24 H 0.38 -1.43 8.74 45.56 0.40 -1.03 16 25 H 0.08 -0.22 7.96 -51.92 -0.41 -0.64 16 26 H -0.26 0.00 7.11 56.52 0.40 0.40 16 27 H -0.25 -0.20 7.05 56.52 0.40 0.20 16 28 H 0.16 -0.27 4.87 -52.49 -0.26 -0.52 16 29 H 0.41 -0.49 8.18 -40.82 -0.33 -0.82 16 30 H 0.08 -0.28 8.14 -51.92 -0.42 -0.70 16 31 H 0.10 -0.52 8.10 -51.93 -0.42 -0.94 16 32 H 0.09 -0.40 8.14 -51.92 -0.42 -0.83 16 33 H 0.10 -0.47 7.84 -51.93 -0.41 -0.88 16 34 H 0.17 -0.34 8.06 -52.49 -0.42 -0.77 16 35 H 0.17 0.18 8.06 -52.49 -0.42 -0.24 16 36 H 0.20 -0.31 8.06 -52.48 -0.42 -0.73 16 37 H 0.09 -0.36 7.90 -51.93 -0.41 -0.77 16 38 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.15 0.00 8.06 -52.49 -0.42 -0.42 16 LS Contribution 335.55 15.07 5.06 5.06 Total: 0.00 -8.58 335.55 -11.19 -19.77 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -4.81 Total: -10.26 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -5.05 Total: -3.59 kcal Atomic # 7 Polarization: -2.74 SS G_CDS: -0.89 Total: -3.63 kcal Atomic # 8 Polarization: -0.10 SS G_CDS: -0.45 Total: -0.56 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.08 Total: -6.51 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -8.58 -11.19 -19.77 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14687814_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.573 kcal (2) G-P(sol) polarization free energy of solvation -8.582 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.991 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.189 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.771 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.802 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds