Wall clock time and date at job start Mon Mar 8 2021 05:33:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.47414 * 2 1 4 4 C 1.50711 * 109.46395 * 240.00430 * 2 1 3 5 5 C 1.38604 * 120.71576 * 119.97971 * 4 2 1 6 6 N 1.32282 * 119.19157 * 180.02562 * 5 4 2 7 7 C 1.32494 * 120.74101 * 0.02562 * 6 5 4 8 8 N 1.38408 * 119.21229 * 179.97438 * 7 6 5 9 9 C 1.46502 * 119.99469 * 180.02562 * 8 7 6 10 10 H 1.09000 * 112.84908 * 336.19286 * 9 8 7 11 11 C 1.53780 * 113.61636 * 107.50440 * 9 8 7 12 12 C 1.53778 * 87.08236 * 139.97930 * 11 9 8 13 13 H 1.09003 * 113.61744 * 89.11553 * 12 11 9 14 14 C 1.50704 * 113.69072 * 220.00852 * 12 11 9 15 15 N 1.30497 * 125.64814 * 192.55780 * 14 12 11 16 16 C 1.34134 * 109.25119 * 179.97438 * 15 14 12 17 17 C 1.34667 * 108.02115 * 0.02562 * 16 15 14 18 18 N 1.35044 * 125.64709 * 12.25223 * 14 12 11 19 19 C 1.53780 * 87.08154 * 334.56825 * 12 11 9 20 20 N 1.32488 * 121.56707 * 359.97438 * 7 6 5 21 21 C 1.32281 * 120.74291 * 359.97438 * 20 7 6 22 22 H 0.96705 * 114.00201 * 59.99110 * 1 2 3 23 23 H 1.08990 * 109.47178 * 120.00835 * 2 1 3 24 24 H 1.48500 * 109.99487 * 60.00563 * 3 2 1 25 25 H 1.48500 * 109.99832 * 181.32184 * 3 2 1 26 26 H 1.07992 * 120.40856 * 0.02562 * 5 4 2 27 27 H 0.96994 * 120.00355 * 359.97438 * 8 7 6 28 28 H 1.08997 * 113.61268 * 254.52483 * 11 9 8 29 29 H 1.08997 * 113.61499 * 25.42970 * 11 9 8 30 30 H 1.07999 * 125.98465 * 180.02562 * 16 15 14 31 31 H 1.08003 * 126.58622 * 180.02562 * 17 16 15 32 32 H 0.96994 * 126.40105 * 0.02562 * 18 14 12 33 33 H 1.09007 * 113.61175 * 270.88436 * 19 12 11 34 34 H 1.08995 * 113.61871 * 139.98645 * 19 12 11 35 35 H 1.07993 * 120.40443 * 180.02562 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2307 5 6 2.7285 -0.0510 -2.1529 6 7 3.1521 -0.7035 -3.2228 7 6 2.8220 -1.9718 -3.4174 8 7 3.2824 -2.6238 -4.5482 9 6 2.9273 -4.0260 -4.7807 10 1 2.6742 -4.5564 -3.8627 11 6 1.9028 -4.2229 -5.9105 12 6 2.7225 -5.4536 -6.3328 13 1 2.4123 -6.3749 -5.8398 14 6 2.8600 -5.6064 -7.8257 15 7 3.2978 -6.6687 -8.4444 16 6 3.2831 -6.4476 -9.7673 17 6 2.8191 -5.2008 -9.9762 18 7 2.5450 -4.6688 -8.7451 19 6 3.9334 -4.7771 -5.6687 20 7 2.0617 -2.6307 -2.5554 21 6 1.6057 -2.0372 -1.4647 22 1 -0.3934 0.4418 -0.7650 23 1 1.7923 -0.5139 0.8898 24 1 1.5617 2.4677 1.2086 25 1 3.5347 1.7701 -0.0322 26 1 3.0006 0.9828 -2.0000 27 1 3.8394 -2.1522 -5.1870 28 1 0.9017 -4.4662 -5.5546 29 1 1.9074 -3.4210 -6.6487 30 1 3.5897 -7.1470 -10.5310 31 1 2.6841 -4.7158 -10.9317 32 1 2.1929 -3.7828 -8.5665 33 1 4.4931 -4.1266 -6.3408 34 1 4.5716 -5.4678 -5.1176 35 1 0.9867 -2.5796 -0.7655 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14771900_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:33:27 Heat of formation + Delta-G solvation = 121.116475 kcal Electronic energy + Delta-G solvation = -20062.928969 eV Core-core repulsion = 16872.052429 eV Total energy + Delta-G solvation = -3190.876540 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.117 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -43.09343 -42.13155 -40.18811 -38.08771 -35.71194 -34.71661 -33.42244 -32.34176 -30.45681 -27.14283 -26.93980 -26.07435 -25.34266 -23.26594 -22.58849 -21.64734 -20.86501 -19.53368 -19.09765 -18.68619 -17.90751 -16.81900 -16.59206 -16.47598 -16.10217 -15.89415 -15.69069 -15.50490 -14.95674 -14.67044 -14.61302 -14.19126 -14.06479 -13.76767 -13.69485 -13.22487 -12.55009 -12.26614 -12.17170 -11.90953 -11.87719 -11.76028 -11.30218 -10.95846 -10.95572 -10.63987 -10.05503 -9.34661 -9.16306 -5.14577 0.01645 0.11721 1.07612 1.18919 1.52167 1.71608 1.89083 2.12328 2.19413 2.76458 3.09767 3.19199 3.29564 3.37007 3.49058 3.56098 3.63907 3.66807 3.75212 3.86839 4.11783 4.17726 4.39026 4.42869 4.47533 4.49595 4.54265 4.67350 4.74191 4.77967 4.83475 4.97565 5.14933 5.26729 5.70664 5.80917 5.97927 6.32286 6.36695 6.47170 7.16229 7.23936 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.046 4.046 3 Si 0.681 3.319 4 C -0.293 4.293 5 C 0.199 3.801 6 N -0.566 5.566 7 C 0.567 3.433 8 N -0.685 5.685 9 C 0.143 3.857 10 H 0.128 0.872 11 C -0.151 4.151 12 C -0.021 4.021 13 H 0.126 0.874 14 C 0.220 3.780 15 N -0.486 5.486 16 C -0.027 4.027 17 C -0.056 4.056 18 N -0.566 5.566 19 C -0.134 4.134 20 N -0.564 5.564 21 C 0.223 3.777 22 H 0.379 0.621 23 H 0.116 0.884 24 H -0.250 1.250 25 H -0.255 1.255 26 H 0.166 0.834 27 H 0.414 0.586 28 H 0.086 0.914 29 H 0.079 0.921 30 H 0.171 0.829 31 H 0.178 0.822 32 H 0.417 0.583 33 H 0.087 0.913 34 H 0.089 0.911 35 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.631 3.739 -1.685 4.414 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.158 4.158 3 Si 0.583 3.417 4 C -0.302 4.302 5 C 0.032 3.968 6 N -0.287 5.287 7 C 0.210 3.790 8 N -0.320 5.320 9 C 0.037 3.963 10 H 0.146 0.854 11 C -0.191 4.191 12 C -0.042 4.042 13 H 0.144 0.856 14 C -0.044 4.044 15 N -0.205 5.205 16 C -0.175 4.175 17 C -0.190 4.190 18 N -0.169 5.169 19 C -0.174 4.174 20 N -0.286 5.286 21 C 0.054 3.946 22 H 0.226 0.774 23 H 0.133 0.867 24 H -0.175 1.175 25 H -0.180 1.180 26 H 0.183 0.817 27 H 0.252 0.748 28 H 0.105 0.895 29 H 0.098 0.902 30 H 0.189 0.811 31 H 0.195 0.805 32 H 0.255 0.745 33 H 0.106 0.894 34 H 0.107 0.893 35 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges -0.480 2.573 -1.241 2.896 hybrid contribution -0.375 1.219 0.047 1.276 sum -0.855 3.792 -1.194 4.066 Atomic orbital electron populations 1.86512 1.17112 1.81606 1.49306 1.24698 0.85117 1.09601 0.96420 0.94969 0.81028 0.77794 0.87924 1.21729 1.07886 0.98535 1.02008 1.22777 0.88546 0.98795 0.86697 1.67902 1.28278 1.08569 1.23970 1.19429 0.86991 0.85356 0.87189 1.44167 1.54906 1.11697 1.21249 1.22499 0.94980 0.80402 0.98369 0.85442 1.23619 1.00147 0.96702 0.98618 1.20740 0.97922 0.99691 0.85839 0.85622 1.22856 1.02637 0.85861 0.93068 1.70252 1.19731 1.24630 1.05905 1.22425 1.05847 0.95892 0.93292 1.22821 1.09343 0.97549 0.89286 1.43268 1.50630 1.16283 1.06765 1.23468 0.96716 0.99118 0.98069 1.67987 1.16028 1.39055 1.05561 1.22864 0.90230 0.90559 0.90901 0.77360 0.86654 1.17494 1.18004 0.81695 0.74785 0.89534 0.90230 0.81146 0.80479 0.74485 0.89422 0.89277 0.81183 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.69 12.79 -35.23 -0.45 0.24 16 2 C -0.05 0.08 2.85 36.01 0.10 0.18 16 3 Si 0.68 -1.57 29.87 -169.99 -5.08 -6.65 16 4 C -0.29 0.21 5.40 -104.35 -0.56 -0.35 16 5 C 0.20 -0.04 9.92 -17.22 -0.17 -0.21 16 6 N -0.57 -0.95 10.46 -13.93 -0.15 -1.09 16 7 C 0.57 0.87 8.42 -322.81 -2.72 -1.85 16 8 N -0.68 0.48 5.50 -55.00 -0.30 0.18 16 9 C 0.14 -0.25 4.25 -67.12 -0.29 -0.54 16 10 H 0.13 -0.12 7.37 -51.93 -0.38 -0.50 16 11 C -0.15 0.37 7.35 -25.92 -0.19 0.18 16 12 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 13 H 0.13 -0.17 8.14 -51.93 -0.42 -0.59 16 14 C 0.22 0.28 7.37 -155.42 -1.14 -0.86 16 15 N -0.49 -2.01 11.25 -10.81 -0.12 -2.13 16 16 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 17 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 18 N -0.57 0.40 5.94 -10.23 -0.06 0.33 16 19 C -0.13 0.26 7.38 -25.92 -0.19 0.07 16 20 N -0.56 -0.88 9.13 -13.93 -0.13 -1.00 16 21 C 0.22 0.04 10.92 -17.22 -0.19 -0.15 16 22 H 0.38 -1.85 8.70 45.56 0.40 -1.45 16 23 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 24 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 25 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 26 H 0.17 -0.43 5.04 -52.49 -0.26 -0.69 16 27 H 0.41 -0.74 8.84 -40.82 -0.36 -1.10 16 28 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 29 H 0.08 -0.25 6.65 -51.93 -0.35 -0.60 16 30 H 0.17 0.05 8.06 -52.49 -0.42 -0.37 16 31 H 0.18 -0.55 8.06 -52.48 -0.42 -0.98 16 32 H 0.42 -1.42 7.54 -40.82 -0.31 -1.73 16 33 H 0.09 -0.17 8.07 -51.92 -0.42 -0.59 16 34 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.17 -0.25 8.06 -52.49 -0.42 -0.68 16 LS Contribution 299.98 15.07 4.52 4.52 Total: 0.00 -8.74 299.98 -11.75 -20.49 By element: Atomic # 1 Polarization: -6.70 SS G_CDS: -3.83 Total: -10.53 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -6.15 Total: -4.36 kcal Atomic # 7 Polarization: -2.96 SS G_CDS: -0.76 Total: -3.71 kcal Atomic # 8 Polarization: 0.69 SS G_CDS: -0.45 Total: 0.24 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.08 Total: -6.65 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -8.74 -11.75 -20.49 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14771900_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 141.606 kcal (2) G-P(sol) polarization free energy of solvation -8.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 132.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.489 kcal (6) G-S(sol) free energy of system = (1) + (5) 121.116 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds