Wall clock time and date at job start Mon Mar 8 2021 05:33:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.46746 * 2 1 4 4 C 1.50693 * 109.47169 * 240.00088 * 2 1 3 5 5 C 1.38844 * 120.33658 * 300.04056 * 4 2 1 6 6 C 1.38342 * 118.50555 * 179.97438 * 5 4 2 7 7 C 1.39095 * 119.09890 * 359.97438 * 6 5 4 8 8 N 1.39003 * 119.70005 * 179.97438 * 7 6 5 9 9 C 1.46500 * 120.00447 * 0.02562 * 8 7 6 10 10 H 1.09002 * 112.84487 * 336.19282 * 9 8 7 11 11 C 1.53774 * 113.61576 * 107.49980 * 9 8 7 12 12 C 1.53782 * 87.08225 * 139.97959 * 11 9 8 13 13 H 1.08998 * 113.61089 * 89.11408 * 12 11 9 14 14 C 1.50700 * 113.61588 * 220.01609 * 12 11 9 15 15 N 1.30502 * 125.65064 * 192.52215 * 14 12 11 16 16 C 1.34122 * 109.25441 * 180.02562 * 15 14 12 17 17 C 1.34668 * 108.02429 * 0.02562 * 16 15 14 18 18 N 1.35039 * 125.64749 * 12.21824 * 14 12 11 19 19 C 1.53779 * 87.08149 * 334.56913 * 12 11 9 20 20 N 1.32422 * 120.59201 * 359.97438 * 7 6 5 21 21 C 1.31944 * 121.62386 * 0.02562 * 20 7 6 22 22 H 0.96699 * 114.00483 * 60.00149 * 1 2 3 23 23 H 1.08999 * 109.47519 * 119.99707 * 2 1 3 24 24 H 1.48506 * 109.99974 * 298.67945 * 3 2 1 25 25 H 1.48494 * 110.00249 * 60.00104 * 3 2 1 26 26 H 1.07994 * 120.74150 * 359.97416 * 5 4 2 27 27 H 1.07998 * 120.44362 * 180.27899 * 6 5 4 28 28 H 0.97005 * 119.99429 * 180.02562 * 8 7 6 29 29 H 1.08999 * 113.61778 * 254.52817 * 11 9 8 30 30 H 1.09005 * 113.62099 * 25.43436 * 11 9 8 31 31 H 1.08001 * 125.98491 * 180.02562 * 16 15 14 32 32 H 1.07994 * 126.59194 * 180.02562 * 17 16 15 33 33 H 0.96992 * 126.40391 * 0.02562 * 18 14 12 34 34 H 1.08999 * 113.60914 * 270.88321 * 19 12 11 35 35 H 1.08993 * 113.61750 * 139.97743 * 19 12 11 36 36 H 1.07996 * 119.57681 * 180.02562 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5995 -2.0393 -1.4575 6 6 2.0808 -2.6541 -2.5995 7 6 2.8759 -1.9241 -3.4768 8 7 3.3667 -2.5296 -4.6278 9 6 3.0455 -3.9303 -4.9126 10 1 2.7927 -4.4972 -4.0166 11 6 2.0398 -4.1103 -6.0619 12 6 2.8916 -5.3078 -6.5150 13 1 2.5956 -6.2519 -6.0578 14 6 3.0501 -5.4045 -8.0105 15 7 3.5191 -6.4342 -8.6607 16 6 3.5161 -6.1664 -9.9749 17 6 3.0271 -4.9233 -10.1457 18 7 2.7249 -4.4421 -8.9003 19 6 4.0789 -4.6286 -5.8123 20 7 3.1695 -0.6576 -3.2254 21 6 2.7245 -0.0457 -2.1445 22 1 -0.3934 0.4417 -0.7650 23 1 1.7924 -0.5138 0.8900 24 1 1.5877 2.4586 -1.2243 25 1 1.5614 2.4679 1.2084 26 1 0.9796 -2.5807 -0.7583 27 1 1.8384 -3.6854 -2.8094 28 1 3.9219 -2.0246 -5.2424 29 1 1.0399 -4.3872 -5.7279 30 1 2.0360 -3.2836 -6.7724 31 1 3.8477 -6.8312 -10.7588 32 1 2.8934 -4.4075 -11.0850 33 1 2.3508 -3.5711 -8.6950 34 1 4.6325 -3.9436 -6.4544 35 1 4.7251 -5.3239 -5.2766 36 1 2.9840 0.9884 -1.9724 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14771900_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:33:30 Heat of formation + Delta-G solvation = 104.643042 kcal Electronic energy + Delta-G solvation = -19933.771030 eV Core-core repulsion = 16807.606059 eV Total energy + Delta-G solvation = -3126.164971 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.122 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -43.13014 -41.52496 -40.15409 -38.01588 -35.56684 -33.46791 -33.41014 -31.57845 -30.37191 -27.05954 -26.93999 -25.50764 -24.81543 -22.94207 -22.42556 -21.58015 -20.82757 -19.34408 -18.65227 -18.54095 -17.52007 -16.86970 -16.47166 -16.29808 -16.02828 -15.96017 -15.43670 -15.31302 -14.87208 -14.70635 -14.40980 -14.09997 -14.03913 -13.79804 -13.68620 -13.32837 -12.60273 -12.44154 -12.21571 -12.02085 -11.87737 -11.19287 -10.99158 -10.98848 -10.80111 -10.55332 -10.40623 -9.37502 -8.77941 -4.97183 0.19793 0.38340 1.04394 1.28530 1.58133 1.91593 1.96210 2.12276 2.16192 2.78494 3.12959 3.22592 3.35950 3.38701 3.52923 3.57713 3.74023 3.75148 3.95335 4.04083 4.08353 4.28626 4.29917 4.36500 4.44698 4.46523 4.54789 4.61047 4.69871 4.70363 4.77841 4.94542 5.00095 5.13433 5.27629 5.46966 5.77867 5.91983 6.33422 6.39365 6.44285 7.10401 7.12768 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.059 4.059 3 Si 0.678 3.322 4 C -0.233 4.233 5 C -0.005 4.005 6 C -0.239 4.239 7 C 0.407 3.593 8 N -0.711 5.711 9 C 0.134 3.866 10 H 0.118 0.882 11 C -0.154 4.154 12 C -0.022 4.022 13 H 0.126 0.874 14 C 0.219 3.781 15 N -0.486 5.486 16 C -0.026 4.026 17 C -0.056 4.056 18 N -0.566 5.566 19 C -0.131 4.131 20 N -0.540 5.540 21 C 0.156 3.844 22 H 0.375 0.625 23 H 0.117 0.883 24 H -0.259 1.259 25 H -0.256 1.256 26 H 0.136 0.864 27 H 0.135 0.865 28 H 0.406 0.594 29 H 0.085 0.915 30 H 0.082 0.918 31 H 0.172 0.828 32 H 0.178 0.822 33 H 0.417 0.583 34 H 0.089 0.911 35 H 0.089 0.911 36 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.385 0.874 -0.772 1.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.170 4.170 3 Si 0.579 3.421 4 C -0.238 4.238 5 C -0.031 4.031 6 C -0.263 4.263 7 C 0.172 3.828 8 N -0.343 5.343 9 C 0.028 3.972 10 H 0.136 0.864 11 C -0.194 4.194 12 C -0.043 4.043 13 H 0.143 0.857 14 C -0.045 4.045 15 N -0.205 5.205 16 C -0.174 4.174 17 C -0.189 4.189 18 N -0.169 5.169 19 C -0.171 4.171 20 N -0.256 5.256 21 C -0.001 4.001 22 H 0.223 0.777 23 H 0.135 0.865 24 H -0.183 1.183 25 H -0.180 1.180 26 H 0.154 0.846 27 H 0.152 0.848 28 H 0.242 0.758 29 H 0.104 0.896 30 H 0.100 0.900 31 H 0.189 0.811 32 H 0.195 0.805 33 H 0.255 0.745 34 H 0.107 0.893 35 H 0.108 0.892 36 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 1.017 0.882 -0.514 1.441 hybrid contribution -1.823 0.726 -0.798 2.118 sum -0.805 1.608 -1.312 2.226 Atomic orbital electron populations 1.86594 1.17957 1.79912 1.49324 1.24756 0.83681 1.10553 0.98014 0.95159 0.91710 0.74712 0.80496 1.20947 1.05905 0.96589 1.00347 1.21206 0.93782 0.93198 0.94916 1.21486 1.05539 1.01788 0.97502 1.18429 0.89202 0.88485 0.86723 1.44489 1.55911 1.11284 1.22591 1.22493 0.95844 0.81548 0.97313 0.86406 1.23675 0.99806 0.97279 0.98654 1.20756 0.97886 0.99970 0.85662 0.85655 1.22834 1.02473 0.85793 0.93447 1.70246 1.19602 1.25547 1.05093 1.22425 1.05692 0.95635 0.93678 1.22831 1.08880 0.98358 0.88871 1.43269 1.49808 1.16898 1.06964 1.23427 0.96644 0.99376 0.97631 1.67158 1.27229 1.09107 1.22120 1.22228 0.91392 0.98680 0.87813 0.77742 0.86515 1.18346 1.18045 0.84580 0.84774 0.75756 0.89630 0.89963 0.81118 0.80465 0.74473 0.89293 0.89215 0.82799 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.44 12.78 -35.23 -0.45 -0.89 16 2 C -0.06 0.03 2.84 36.00 0.10 0.14 16 3 Si 0.68 -0.78 29.82 -169.99 -5.07 -5.85 16 4 C -0.23 -0.01 5.40 -104.46 -0.56 -0.57 16 5 C -0.01 0.00 9.76 -39.32 -0.38 -0.38 16 6 C -0.24 0.07 9.28 -39.23 -0.36 -0.29 16 7 C 0.41 0.28 7.65 -155.02 -1.19 -0.91 16 8 N -0.71 1.06 5.53 -53.15 -0.29 0.77 16 9 C 0.13 -0.44 4.03 -67.12 -0.27 -0.71 16 10 H 0.12 -0.47 6.10 -51.93 -0.32 -0.79 16 11 C -0.15 0.54 7.35 -25.92 -0.19 0.35 16 12 C -0.02 0.05 4.29 -90.96 -0.39 -0.34 16 13 H 0.13 -0.30 8.14 -51.93 -0.42 -0.72 16 14 C 0.22 0.18 7.36 -155.42 -1.14 -0.96 16 15 N -0.49 -1.83 11.25 -10.82 -0.12 -1.95 16 16 C -0.03 -0.05 11.87 -17.82 -0.21 -0.26 16 17 C -0.06 0.01 12.04 -16.56 -0.20 -0.19 16 18 N -0.57 0.53 5.94 -10.23 -0.06 0.47 16 19 C -0.13 0.37 7.38 -25.92 -0.19 0.18 16 20 N -0.54 -1.08 10.39 -12.44 -0.13 -1.21 16 21 C 0.16 0.10 9.84 -17.56 -0.17 -0.07 16 22 H 0.38 -0.67 8.70 45.56 0.40 -0.28 16 23 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 24 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 25 H -0.26 -0.56 7.11 56.52 0.40 -0.15 16 26 H 0.14 -0.15 8.06 -52.49 -0.42 -0.57 16 27 H 0.13 -0.31 6.04 -52.49 -0.32 -0.63 16 28 H 0.41 -0.71 8.85 -40.82 -0.36 -1.07 16 29 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 30 H 0.08 -0.30 6.64 -51.93 -0.34 -0.65 16 31 H 0.17 0.02 8.06 -52.49 -0.42 -0.41 16 32 H 0.18 -0.57 8.06 -52.49 -0.42 -1.00 16 33 H 0.42 -1.49 7.53 -40.82 -0.31 -1.80 16 34 H 0.09 -0.21 8.07 -51.93 -0.42 -0.62 16 35 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.16 -0.18 4.88 -52.49 -0.26 -0.44 16 LS Contribution 302.38 15.07 4.56 4.56 Total: 0.00 -8.25 302.38 -10.81 -19.06 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: -4.07 Total: -10.91 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -5.17 Total: -4.03 kcal Atomic # 7 Polarization: -1.32 SS G_CDS: -0.61 Total: -1.93 kcal Atomic # 8 Polarization: -0.44 SS G_CDS: -0.45 Total: -0.89 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.07 Total: -5.85 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -8.25 -10.81 -19.06 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14771900_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.700 kcal (2) G-P(sol) polarization free energy of solvation -8.249 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.057 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds