Wall clock time and date at job start Mon Mar 8 2021 05:33:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.33328 * 125.94966 * 2 1 4 4 C 1.50697 * 122.71308 * 359.96789 * 3 2 1 5 5 O 1.42898 * 109.47317 * 113.27664 * 4 3 2 6 6 Si 1.86306 * 109.47277 * 233.27926 * 4 3 2 7 7 N 1.32126 * 114.58091 * 179.69349 * 3 2 1 8 8 C 1.29686 * 116.86421 * 0.27141 * 7 3 2 9 9 N 1.38608 * 124.95127 * 179.97438 * 8 7 3 10 10 C 1.46499 * 120.00191 * 179.97438 * 9 8 7 11 11 H 1.09004 * 112.84922 * 25.33897 * 10 9 8 12 12 C 1.53786 * 113.61461 * 156.53238 * 10 9 8 13 13 C 1.53776 * 87.07904 * 139.98246 * 12 10 9 14 14 H 1.09002 * 113.61207 * 89.20634 * 13 12 10 15 15 C 1.50701 * 113.61220 * 220.01842 * 13 12 10 16 16 N 1.30499 * 125.64951 * 264.69235 * 15 13 12 17 17 C 1.34132 * 109.25619 * 179.89229 * 16 15 13 18 18 C 1.34667 * 108.01833 * 0.37708 * 17 16 15 19 19 N 1.35047 * 125.64958 * 85.00636 * 15 13 12 20 20 C 1.53777 * 113.61508 * 254.14057 * 10 9 8 21 21 S 1.70971 * 110.10103 * 359.97438 * 8 7 3 22 22 H 1.09001 * 109.46651 * 84.91570 * 1 2 3 23 23 H 1.09001 * 109.46679 * 204.90915 * 1 2 3 24 24 H 1.09000 * 109.47158 * 324.91454 * 1 2 3 25 25 H 1.09005 * 109.46984 * 353.27862 * 4 3 2 26 26 H 0.96705 * 114.00308 * 179.97438 * 5 4 3 27 27 H 1.48498 * 109.99663 * 299.99851 * 6 4 3 28 28 H 1.48505 * 109.99559 * 61.31741 * 6 4 3 29 29 H 0.97004 * 119.99809 * 0.02562 * 9 8 7 30 30 H 1.08997 * 113.61306 * 254.53848 * 12 10 9 31 31 H 1.09000 * 113.61333 * 25.43396 * 12 10 9 32 32 H 1.08005 * 125.98950 * 180.11624 * 17 16 15 33 33 H 1.08000 * 126.58746 * 179.74742 * 18 17 16 34 34 H 0.96998 * 126.39471 * 359.97438 * 19 15 13 35 35 H 1.08997 * 113.61929 * 334.56395 * 20 10 9 36 36 H 1.08994 * 113.61437 * 105.47482 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 -0.0007 5 8 2.0634 3.1208 1.2368 6 14 2.4943 3.4432 -1.4086 7 7 3.5850 0.8189 0.0064 8 6 3.9315 -0.4308 0.0064 9 7 5.2384 -0.8925 0.0121 10 6 5.5066 -2.3327 0.0119 11 1 4.6936 -2.9146 -0.4224 12 6 6.8927 -2.7012 -0.5431 13 6 6.9759 -3.7501 0.5784 14 1 6.5661 -4.7209 0.2995 15 6 8.3401 -3.8506 1.2108 16 7 9.2694 -4.7060 0.8827 17 6 10.3491 -4.5030 1.6522 18 6 10.0755 -3.4885 2.4945 19 7 8.8012 -3.0742 2.2150 20 6 5.9915 -2.8692 1.3691 21 16 2.5413 -1.4260 -0.0017 22 1 -0.3633 0.0911 -1.0237 23 1 -0.3633 -0.9321 0.4328 24 1 -0.3633 0.8409 0.5907 25 1 0.6586 2.4500 -0.1215 26 1 1.7410 4.0299 1.3064 27 1 3.9704 3.4954 -1.2556 28 1 2.1400 2.8079 -2.7033 29 1 5.9755 -0.2619 0.0169 30 1 6.8617 -3.1330 -1.5434 31 1 7.6275 -1.9017 -0.4486 32 1 11.2741 -5.0588 1.6073 33 1 10.7348 -3.0805 3.2464 34 1 8.3193 -2.3571 2.6559 35 1 6.4796 -2.1158 1.9873 36 1 5.2343 -3.4364 1.9101 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14771900_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:33:37 Heat of formation + Delta-G solvation = 107.277908 kcal Electronic energy + Delta-G solvation = -20505.672125 eV Core-core repulsion = 17313.236038 eV Total energy + Delta-G solvation = -3192.436087 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.094 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -43.14436 -41.07303 -40.29700 -37.53871 -35.74348 -33.47057 -33.00231 -30.63248 -29.07770 -27.12247 -26.34388 -25.56050 -24.18958 -22.81503 -21.85679 -21.16577 -19.96406 -19.50687 -18.84479 -18.30521 -17.55995 -16.80770 -16.60924 -16.14648 -15.86254 -15.59947 -15.26640 -15.00388 -14.74121 -14.45617 -14.20832 -14.19606 -13.99819 -13.84408 -13.63457 -13.52018 -12.95521 -12.62919 -12.35978 -12.13042 -11.97091 -11.75931 -11.12410 -11.01307 -10.99715 -10.57730 -10.34895 -10.02286 -9.39162 -8.70273 -4.94086 -0.04742 0.13253 0.70238 1.02609 1.31999 1.73511 1.78279 1.91325 2.08874 2.14380 2.26295 3.03220 3.15535 3.27923 3.42947 3.50924 3.63367 3.73392 4.01168 4.06190 4.14421 4.18803 4.30856 4.35271 4.38717 4.44224 4.55646 4.58830 4.64674 4.70992 4.82541 4.86535 4.93449 5.11077 5.16198 5.53454 5.76555 6.19872 6.31732 6.65610 6.94033 7.10987 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C -0.247 4.247 3 C 0.113 3.887 4 C -0.034 4.034 5 O -0.539 6.539 6 Si 0.702 3.298 7 N -0.535 5.535 8 C 0.313 3.687 9 N -0.684 5.684 10 C 0.130 3.870 11 H 0.115 0.885 12 C -0.128 4.128 13 C -0.020 4.020 14 H 0.128 0.872 15 C 0.217 3.783 16 N -0.484 5.484 17 C -0.026 4.026 18 C -0.054 4.054 19 N -0.566 5.566 20 C -0.153 4.153 21 S 0.111 5.889 22 H 0.074 0.926 23 H 0.071 0.929 24 H 0.081 0.919 25 H 0.079 0.921 26 H 0.382 0.618 27 H -0.246 1.246 28 H -0.264 1.264 29 H 0.413 0.587 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.172 0.828 33 H 0.179 0.821 34 H 0.417 0.583 35 H 0.085 0.915 36 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.942 2.095 1.065 3.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.370 4.370 3 C -0.017 4.017 4 C -0.147 4.147 5 O -0.345 6.345 6 Si 0.601 3.399 7 N -0.260 5.260 8 C -0.059 4.059 9 N -0.324 5.324 10 C 0.024 3.976 11 H 0.132 0.868 12 C -0.168 4.168 13 C -0.041 4.041 14 H 0.145 0.855 15 C -0.047 4.047 16 N -0.204 5.204 17 C -0.174 4.174 18 C -0.188 4.188 19 N -0.169 5.169 20 C -0.193 4.193 21 S 0.360 5.640 22 H 0.093 0.907 23 H 0.089 0.911 24 H 0.099 0.901 25 H 0.097 0.903 26 H 0.230 0.770 27 H -0.171 1.171 28 H -0.189 1.189 29 H 0.251 0.749 30 H 0.111 0.889 31 H 0.110 0.890 32 H 0.189 0.811 33 H 0.196 0.804 34 H 0.256 0.744 35 H 0.104 0.896 36 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -1.850 -0.011 -0.127 1.855 hybrid contribution 0.069 1.422 1.234 1.884 sum -1.781 1.412 1.107 2.528 Atomic orbital electron populations 1.20201 0.86579 1.03446 1.02808 1.25148 1.01303 0.93209 1.17302 1.18951 0.86618 0.94686 1.01439 1.24239 1.01859 0.91674 0.96920 1.86524 1.81423 1.31364 1.35223 0.96114 0.82248 0.86538 0.74970 1.66098 1.17501 1.16469 1.25900 1.23382 0.92015 0.91518 0.98942 1.43932 1.01771 1.06453 1.80234 1.22602 0.98325 0.79643 0.96992 0.86768 1.23409 0.95304 0.98320 0.99733 1.20764 0.87345 1.00237 0.95748 0.85459 1.22777 0.97390 0.92349 0.92143 1.70244 1.00674 1.23048 1.26389 1.22431 0.98836 0.99626 0.96537 1.22841 0.87446 1.02574 1.05934 1.43274 1.13797 1.30020 1.29839 1.23718 0.99123 0.99002 0.97503 1.83852 0.96379 1.09950 1.73810 0.90741 0.91052 0.90083 0.90320 0.77021 1.17062 1.18939 0.74890 0.88933 0.89007 0.81070 0.80416 0.74441 0.89634 0.89234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.03 9.71 36.00 0.35 0.38 16 2 C -0.25 -0.63 6.57 -36.02 -0.24 -0.87 16 3 C 0.11 0.47 5.22 -84.18 -0.44 0.03 16 4 C -0.03 -0.05 2.82 36.00 0.10 0.05 16 5 O -0.54 -0.94 12.86 -35.23 -0.45 -1.39 16 6 Si 0.70 0.67 32.62 -169.99 -5.54 -4.88 16 7 N -0.53 -2.87 9.77 -11.36 -0.11 -2.99 16 8 C 0.31 0.92 8.24 -87.68 -0.72 0.20 16 9 N -0.68 -0.10 5.52 -54.99 -0.30 -0.40 16 10 C 0.13 -0.27 4.20 -67.12 -0.28 -0.56 16 11 H 0.11 -0.29 7.11 -51.93 -0.37 -0.66 16 12 C -0.13 0.28 7.38 -25.92 -0.19 0.09 16 13 C -0.02 0.03 4.29 -90.87 -0.39 -0.36 16 14 H 0.13 -0.26 8.14 -51.93 -0.42 -0.68 16 15 C 0.22 0.25 7.36 -155.41 -1.14 -0.90 16 16 N -0.48 -1.92 11.25 -10.81 -0.12 -2.04 16 17 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 18 C -0.05 0.00 12.04 -16.56 -0.20 -0.20 16 19 N -0.57 0.34 5.94 -10.23 -0.06 0.28 16 20 C -0.15 0.42 7.37 -25.83 -0.19 0.23 16 21 S 0.11 0.16 21.71 -107.50 -2.33 -2.18 16 22 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 23 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 24 H 0.08 -0.10 7.18 -51.93 -0.37 -0.47 16 25 H 0.08 -0.09 6.34 -51.93 -0.33 -0.42 16 26 H 0.38 -1.47 8.74 45.56 0.40 -1.07 16 27 H -0.25 -1.30 7.11 56.52 0.40 -0.90 16 28 H -0.26 -0.99 7.11 56.52 0.40 -0.58 16 29 H 0.41 -0.10 8.84 -40.82 -0.36 -0.46 16 30 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.09 -0.17 8.06 -51.93 -0.42 -0.59 16 32 H 0.17 0.04 8.06 -52.48 -0.42 -0.38 16 33 H 0.18 -0.53 8.06 -52.49 -0.42 -0.95 16 34 H 0.42 -1.31 7.54 -40.82 -0.31 -1.62 16 35 H 0.09 -0.26 6.65 -51.93 -0.35 -0.61 16 36 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 LS Contribution 318.23 15.07 4.80 4.80 Total: 0.00 -10.77 318.23 -11.95 -22.72 By element: Atomic # 1 Polarization: -7.49 SS G_CDS: -4.26 Total: -11.75 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: -3.56 Total: -2.17 kcal Atomic # 7 Polarization: -4.56 SS G_CDS: -0.60 Total: -5.15 kcal Atomic # 8 Polarization: -0.94 SS G_CDS: -0.45 Total: -1.39 kcal Atomic # 14 Polarization: 0.67 SS G_CDS: -5.54 Total: -4.88 kcal Atomic # 16 Polarization: 0.16 SS G_CDS: -2.33 Total: -2.18 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -10.77 -11.95 -22.72 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14771900_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.999 kcal (2) G-P(sol) polarization free energy of solvation -10.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 119.229 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.951 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.721 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds