Wall clock time and date at job start Mon Mar 8 2021 05:33:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86298 * 109.46990 * 2 1 4 4 C 1.50698 * 109.47193 * 239.99941 * 2 1 3 5 5 C 1.37986 * 120.32652 * 119.99972 * 4 2 1 6 6 N 1.32008 * 120.90283 * 180.02562 * 5 4 2 7 7 C 1.32335 * 121.64249 * 359.97438 * 6 5 4 8 8 N 1.39143 * 119.71312 * 179.97438 * 7 6 5 9 9 C 1.46497 * 120.00268 * 0.02562 * 8 7 6 10 10 H 1.09004 * 112.85165 * 23.80334 * 9 8 7 11 11 C 1.53787 * 113.61810 * 155.00236 * 9 8 7 12 12 C 1.53773 * 87.08299 * 140.06227 * 11 9 8 13 13 H 1.09007 * 113.61484 * 89.19982 * 12 11 9 14 14 C 1.50698 * 113.61371 * 220.01690 * 12 11 9 15 15 N 1.30500 * 125.65161 * 263.44477 * 14 12 11 16 16 C 1.34127 * 109.25894 * 180.02562 * 15 14 12 17 17 C 1.34665 * 108.01668 * 0.26753 * 16 15 14 18 18 N 1.35045 * 125.65255 * 83.47514 * 14 12 11 19 19 C 1.53779 * 87.17723 * 334.61046 * 12 11 9 20 20 C 1.39343 * 120.56980 * 0.25568 * 7 6 5 21 21 F 1.35093 * 120.47335 * 179.72021 * 20 7 6 22 22 C 1.38442 * 119.04994 * 359.49574 * 20 7 6 23 23 H 0.96703 * 113.99846 * 60.00105 * 1 2 3 24 24 H 1.08992 * 109.46831 * 120.00126 * 2 1 3 25 25 H 1.48506 * 109.99701 * 59.99979 * 3 2 1 26 26 H 1.48500 * 109.99855 * 181.31363 * 3 2 1 27 27 H 1.08001 * 119.54535 * 0.02562 * 5 4 2 28 28 H 0.97003 * 120.00054 * 179.97438 * 8 7 6 29 29 H 1.08995 * 113.61018 * 25.50955 * 11 9 8 30 30 H 1.09003 * 113.61110 * 254.61087 * 11 9 8 31 31 H 1.08002 * 125.98809 * 179.97438 * 16 15 14 32 32 H 1.08002 * 126.58770 * 179.69323 * 17 16 15 33 33 H 0.97005 * 126.39044 * 0.02562 * 18 14 12 34 34 H 1.08994 * 113.61850 * 139.93590 * 19 12 11 35 35 H 1.09001 * 113.61348 * 270.84645 * 19 12 11 36 36 H 1.08006 * 120.75842 * 180.24092 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7251 -0.0463 -2.1431 6 7 3.1710 -0.6574 -3.2250 7 6 2.8784 -1.9230 -3.4779 8 7 3.3696 -2.5273 -4.6310 9 6 4.2072 -1.7631 -5.5586 10 1 4.7091 -0.9217 -5.0808 11 6 5.1447 -2.6389 -6.4066 12 6 4.8204 -1.7068 -7.5859 13 1 5.4909 -0.8508 -7.6631 14 6 4.6419 -2.4304 -8.8957 15 7 5.5592 -2.5837 -9.8111 16 6 5.0470 -3.2767 -10.8390 17 6 3.7618 -3.5584 -10.5521 18 7 3.5059 -3.0269 -9.3170 19 6 3.4959 -1.3893 -6.8720 20 6 2.0779 -2.6539 -2.6023 21 9 1.7758 -3.9441 -2.8652 22 6 1.6005 -2.0403 -1.4568 23 1 -0.3933 0.4417 -0.7651 24 1 1.7923 -0.5138 0.8899 25 1 1.5614 2.4678 1.2086 26 1 3.5346 1.7703 -0.0320 27 1 2.9851 0.9875 -1.9700 28 1 3.1580 -3.4548 -4.8203 29 1 4.7844 -3.6583 -6.5438 30 1 6.1869 -2.5962 -6.0901 31 1 5.5718 -3.5552 -11.7409 32 1 3.0670 -4.1012 -11.1759 33 1 2.6644 -3.0669 -8.8361 34 1 3.2089 -0.3395 -6.9307 35 1 2.6839 -2.0667 -7.1367 36 1 0.9810 -2.5820 -0.7573 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14771900_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:33:40 Heat of formation + Delta-G solvation = 58.917819 kcal Electronic energy + Delta-G solvation = -22309.882136 eV Core-core repulsion = 18712.280395 eV Total energy + Delta-G solvation = -3597.601741 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.112 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -49.92973 -43.09087 -41.51559 -40.09987 -38.01184 -35.67172 -33.42305 -33.25406 -31.64001 -30.33541 -27.07342 -26.90331 -25.92044 -24.60715 -23.02343 -22.57347 -21.61817 -20.86821 -19.39711 -19.18735 -18.46250 -18.25144 -17.57623 -17.02484 -16.72824 -16.30895 -16.14756 -16.04167 -15.73822 -15.41744 -15.12732 -14.77240 -14.67407 -14.39335 -14.11050 -14.07156 -13.72741 -13.64415 -13.54394 -12.68823 -12.46612 -12.23224 -12.09315 -11.84935 -11.30974 -10.96418 -10.95433 -10.73764 -10.71232 -10.51005 -9.34274 -8.84239 -5.12737 -0.12722 0.06158 1.07445 1.18546 1.54070 1.84466 1.90035 2.12937 2.19145 2.48992 2.97903 3.15884 3.22088 3.32546 3.37568 3.51011 3.54031 3.66578 3.78690 3.85024 3.95576 4.11485 4.36421 4.38253 4.40543 4.47964 4.50660 4.54439 4.63805 4.68986 4.79244 4.84585 4.92213 5.03197 5.16714 5.36456 5.80734 5.86134 6.09038 6.36480 6.47681 6.87450 7.16138 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.686 3.314 4 C -0.208 4.208 5 C 0.148 3.852 6 N -0.510 5.510 7 C 0.390 3.610 8 N -0.707 5.707 9 C 0.140 3.860 10 H 0.127 0.873 11 C -0.136 4.136 12 C -0.021 4.021 13 H 0.126 0.874 14 C 0.220 3.780 15 N -0.486 5.486 16 C -0.027 4.027 17 C -0.057 4.057 18 N -0.566 5.566 19 C -0.151 4.151 20 C -0.020 4.020 21 F -0.134 7.134 22 C -0.038 4.038 23 H 0.380 0.620 24 H 0.116 0.884 25 H -0.251 1.251 26 H -0.253 1.253 27 H 0.164 0.836 28 H 0.412 0.588 29 H 0.085 0.915 30 H 0.088 0.912 31 H 0.171 0.829 32 H 0.178 0.822 33 H 0.417 0.583 34 H 0.086 0.914 35 H 0.078 0.922 36 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.867 1.336 -0.908 3.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.167 4.167 3 Si 0.588 3.412 4 C -0.214 4.214 5 C -0.010 4.010 6 N -0.227 5.227 7 C 0.152 3.848 8 N -0.339 5.339 9 C 0.035 3.965 10 H 0.145 0.855 11 C -0.175 4.175 12 C -0.042 4.042 13 H 0.144 0.856 14 C -0.044 4.044 15 N -0.205 5.205 16 C -0.175 4.175 17 C -0.190 4.190 18 N -0.170 5.170 19 C -0.191 4.191 20 C -0.046 4.046 21 F -0.113 7.113 22 C -0.064 4.064 23 H 0.227 0.773 24 H 0.133 0.867 25 H -0.176 1.176 26 H -0.178 1.178 27 H 0.180 0.820 28 H 0.249 0.751 29 H 0.104 0.896 30 H 0.107 0.893 31 H 0.189 0.811 32 H 0.195 0.805 33 H 0.255 0.745 34 H 0.105 0.895 35 H 0.096 0.904 36 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -0.822 2.413 -0.651 2.631 hybrid contribution -1.883 -2.239 0.554 2.977 sum -2.705 0.174 -0.098 2.712 Atomic orbital electron populations 1.86517 1.17066 1.81657 1.49316 1.24868 0.85239 1.09950 0.96642 0.94842 0.81089 0.77524 0.87778 1.20949 1.04703 0.95195 1.00513 1.22357 0.91723 0.99085 0.87789 1.67273 1.26250 1.07362 1.21803 1.18447 0.90100 0.89159 0.87132 1.44560 1.54421 1.14397 1.20485 1.22492 0.91052 0.95695 0.87282 0.85489 1.23466 1.01382 0.98702 0.93997 1.20753 0.99244 0.98280 0.85928 0.85617 1.22876 0.82805 1.00841 0.97907 1.70251 1.30309 1.18287 1.01689 1.22423 0.92734 1.02728 0.99566 1.22819 1.00054 1.07255 0.88890 1.43267 1.13646 1.43493 1.16554 1.23648 0.96242 1.03241 0.95961 1.18009 1.06806 0.81000 0.98829 1.91491 1.92082 1.33796 1.93916 1.21290 0.96208 0.94284 0.94606 0.77292 0.86686 1.17594 1.17806 0.81968 0.75068 0.89600 0.89340 0.81148 0.80492 0.74505 0.89485 0.90365 0.83278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.55 12.78 -35.23 -0.45 0.10 16 2 C -0.06 0.09 2.84 36.00 0.10 0.19 16 3 Si 0.69 -1.67 29.82 -169.99 -5.07 -6.74 16 4 C -0.21 0.20 5.40 -104.47 -0.56 -0.37 16 5 C 0.15 -0.13 9.84 -17.57 -0.17 -0.31 16 6 N -0.51 -0.27 9.13 -12.37 -0.11 -0.38 16 7 C 0.39 0.21 7.49 -154.86 -1.16 -0.95 16 8 N -0.71 0.85 5.51 -52.97 -0.29 0.56 16 9 C 0.14 -0.29 4.27 -67.02 -0.29 -0.57 16 10 H 0.13 -0.18 7.41 -51.93 -0.38 -0.56 16 11 C -0.14 0.27 7.38 -25.92 -0.19 0.08 16 12 C -0.02 0.03 4.28 -90.97 -0.39 -0.36 16 13 H 0.13 -0.18 8.14 -51.92 -0.42 -0.60 16 14 C 0.22 0.28 7.36 -155.41 -1.14 -0.87 16 15 N -0.49 -2.01 11.25 -10.82 -0.12 -2.13 16 16 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 17 C -0.06 0.00 12.04 -16.57 -0.20 -0.20 16 18 N -0.57 0.39 5.94 -10.23 -0.06 0.33 16 19 C -0.15 0.40 7.38 -25.82 -0.19 0.21 16 20 C -0.02 -0.02 7.35 -39.10 -0.29 -0.30 16 21 F -0.13 -0.20 16.65 2.25 0.04 -0.17 16 22 C -0.04 0.00 9.75 -39.26 -0.38 -0.38 16 23 H 0.38 -1.83 8.70 45.56 0.40 -1.44 16 24 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 25 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 26 H -0.25 0.07 7.11 56.52 0.40 0.47 16 27 H 0.16 -0.51 4.88 -52.49 -0.26 -0.76 16 28 H 0.41 -0.86 8.20 -40.82 -0.33 -1.19 16 29 H 0.09 -0.16 8.07 -51.93 -0.42 -0.58 16 30 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.17 0.05 8.06 -52.49 -0.42 -0.37 16 32 H 0.18 -0.55 8.06 -52.49 -0.42 -0.97 16 33 H 0.42 -1.41 7.54 -40.82 -0.31 -1.72 16 34 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 35 H 0.08 -0.26 6.64 -51.93 -0.34 -0.60 16 36 H 0.15 -0.10 8.06 -52.48 -0.42 -0.52 16 LS Contribution 310.52 15.07 4.68 4.68 Total: 0.00 -8.07 310.52 -10.26 -18.34 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -3.80 Total: -10.48 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -5.08 Total: -4.10 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: -0.59 Total: -1.63 kcal Atomic # 8 Polarization: 0.55 SS G_CDS: -0.45 Total: 0.10 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.04 Total: -0.17 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.07 Total: -6.74 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -8.07 -10.26 -18.34 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14771900_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.254 kcal (2) G-P(sol) polarization free energy of solvation -8.072 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.336 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds