Wall clock time and date at job start Mon Mar 8 2021 05:33:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86298 * 109.46990 * 2 1 4 4 C 1.50698 * 109.47193 * 239.99941 * 2 1 3 5 5 C 1.37986 * 120.32652 * 119.99972 * 4 2 1 6 6 N 1.32008 * 120.90283 * 180.02562 * 5 4 2 7 7 C 1.32335 * 121.64249 * 359.97438 * 6 5 4 8 8 N 1.39143 * 119.71312 * 179.97438 * 7 6 5 9 9 C 1.46497 * 120.00268 * 0.02562 * 8 7 6 10 10 H 1.09004 * 112.85165 * 23.80334 * 9 8 7 11 11 C 1.53787 * 113.61810 * 155.00236 * 9 8 7 12 12 C 1.53773 * 87.08299 * 140.06227 * 11 9 8 13 13 H 1.09007 * 113.61484 * 89.19982 * 12 11 9 14 14 C 1.50698 * 113.61371 * 220.01690 * 12 11 9 15 15 N 1.30500 * 125.65161 * 263.44477 * 14 12 11 16 16 C 1.34127 * 109.25894 * 180.02562 * 15 14 12 17 17 C 1.34665 * 108.01668 * 0.26753 * 16 15 14 18 18 N 1.35045 * 125.65255 * 83.47514 * 14 12 11 19 19 C 1.53779 * 87.17723 * 334.61046 * 12 11 9 20 20 C 1.39343 * 120.56980 * 0.25568 * 7 6 5 21 21 F 1.35093 * 120.47335 * 179.72021 * 20 7 6 22 22 C 1.38442 * 119.04994 * 359.49574 * 20 7 6 23 23 H 0.96703 * 113.99846 * 60.00105 * 1 2 3 24 24 H 1.08992 * 109.46831 * 120.00126 * 2 1 3 25 25 H 1.48506 * 109.99701 * 59.99979 * 3 2 1 26 26 H 1.48500 * 109.99855 * 181.31363 * 3 2 1 27 27 H 1.08001 * 119.54535 * 0.02562 * 5 4 2 28 28 H 0.97003 * 120.00054 * 179.97438 * 8 7 6 29 29 H 1.08995 * 113.61018 * 25.50955 * 11 9 8 30 30 H 1.09003 * 113.61110 * 254.61087 * 11 9 8 31 31 H 1.08002 * 125.98809 * 179.97438 * 16 15 14 32 32 H 1.08002 * 126.58770 * 179.69323 * 17 16 15 33 33 H 0.97005 * 126.39044 * 0.02562 * 18 14 12 34 34 H 1.08994 * 113.61850 * 139.93590 * 19 12 11 35 35 H 1.09001 * 113.61348 * 270.84645 * 19 12 11 36 36 H 1.08006 * 120.75842 * 180.24092 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7251 -0.0463 -2.1431 6 7 3.1710 -0.6574 -3.2250 7 6 2.8784 -1.9230 -3.4779 8 7 3.3696 -2.5273 -4.6310 9 6 4.2072 -1.7631 -5.5586 10 1 4.7091 -0.9217 -5.0808 11 6 5.1447 -2.6389 -6.4066 12 6 4.8204 -1.7068 -7.5859 13 1 5.4909 -0.8508 -7.6631 14 6 4.6419 -2.4304 -8.8957 15 7 5.5592 -2.5837 -9.8111 16 6 5.0470 -3.2767 -10.8390 17 6 3.7618 -3.5584 -10.5521 18 7 3.5059 -3.0269 -9.3170 19 6 3.4959 -1.3893 -6.8720 20 6 2.0779 -2.6539 -2.6023 21 9 1.7758 -3.9441 -2.8652 22 6 1.6005 -2.0403 -1.4568 23 1 -0.3933 0.4417 -0.7651 24 1 1.7923 -0.5138 0.8899 25 1 1.5614 2.4678 1.2086 26 1 3.5346 1.7703 -0.0320 27 1 2.9851 0.9875 -1.9700 28 1 3.1580 -3.4548 -4.8203 29 1 4.7844 -3.6583 -6.5438 30 1 6.1869 -2.5962 -6.0901 31 1 5.5718 -3.5552 -11.7409 32 1 3.0670 -4.1012 -11.1759 33 1 2.6644 -3.0669 -8.8361 34 1 3.2089 -0.3395 -6.9307 35 1 2.6839 -2.0667 -7.1367 36 1 0.9810 -2.5820 -0.7573 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_14771900_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:33:39 Heat of formation + Delta-G solvation = 59.855346 kcal Electronic energy + Delta-G solvation = -22309.841482 eV Core-core repulsion = 18712.280395 eV Total energy + Delta-G solvation = -3597.561087 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.112 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -49.96820 -43.09784 -41.45867 -39.99036 -37.90632 -35.58512 -33.46795 -33.21168 -31.58702 -30.31510 -26.97918 -26.76079 -25.84349 -24.56941 -22.97257 -22.56485 -21.62220 -20.78027 -19.33500 -19.11035 -18.39129 -18.22495 -17.51469 -17.02419 -16.63187 -16.22427 -16.07998 -15.97669 -15.69236 -15.38833 -15.09605 -14.73843 -14.67539 -14.34757 -14.07180 -14.02584 -13.56462 -13.54042 -13.47915 -12.58203 -12.35118 -12.15136 -12.05637 -11.72596 -11.20717 -11.04965 -11.02850 -10.70772 -10.66620 -10.40822 -9.36155 -8.77261 -4.96012 -0.08756 0.09801 1.08174 1.33089 1.67300 1.93415 2.01756 2.11653 2.21744 2.53428 3.01670 3.24252 3.34456 3.43031 3.51219 3.64544 3.67457 3.80502 3.86499 3.96824 4.03708 4.24000 4.43724 4.47570 4.51376 4.57419 4.60412 4.66644 4.72120 4.79999 4.92452 4.98618 4.98951 5.08730 5.20087 5.44885 5.78003 5.96293 6.17832 6.46968 6.79832 6.94047 7.12762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.059 4.059 3 Si 0.775 3.225 4 C -0.205 4.205 5 C 0.148 3.852 6 N -0.522 5.522 7 C 0.383 3.617 8 N -0.702 5.702 9 C 0.144 3.856 10 H 0.122 0.878 11 C -0.130 4.130 12 C -0.022 4.022 13 H 0.124 0.876 14 C 0.213 3.787 15 N -0.533 5.533 16 C -0.063 4.063 17 C -0.045 4.045 18 N -0.557 5.557 19 C -0.139 4.139 20 C -0.037 4.037 21 F -0.142 7.142 22 C -0.042 4.042 23 H 0.396 0.604 24 H 0.110 0.890 25 H -0.299 1.299 26 H -0.278 1.278 27 H 0.184 0.816 28 H 0.416 0.584 29 H 0.086 0.914 30 H 0.085 0.915 31 H 0.177 0.823 32 H 0.209 0.791 33 H 0.430 0.570 34 H 0.089 0.911 35 H 0.088 0.912 36 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.740 1.559 -1.033 4.181 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.170 4.170 3 Si 0.681 3.319 4 C -0.210 4.210 5 C -0.009 4.009 6 N -0.239 5.239 7 C 0.145 3.855 8 N -0.334 5.334 9 C 0.039 3.961 10 H 0.140 0.860 11 C -0.169 4.169 12 C -0.043 4.043 13 H 0.142 0.858 14 C -0.052 4.052 15 N -0.253 5.253 16 C -0.210 4.210 17 C -0.179 4.179 18 N -0.162 5.162 19 C -0.178 4.178 20 C -0.064 4.064 21 F -0.121 7.121 22 C -0.068 4.068 23 H 0.246 0.754 24 H 0.128 0.872 25 H -0.227 1.227 26 H -0.205 1.205 27 H 0.200 0.800 28 H 0.254 0.746 29 H 0.105 0.895 30 H 0.104 0.896 31 H 0.194 0.806 32 H 0.226 0.774 33 H 0.271 0.729 34 H 0.108 0.892 35 H 0.106 0.894 36 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -1.721 2.612 -0.806 3.230 hybrid contribution -1.622 -2.303 0.627 2.886 sum -3.343 0.310 -0.179 3.362 Atomic orbital electron populations 1.86482 1.17236 1.82133 1.50568 1.24990 0.85233 1.10637 0.96131 0.93812 0.78050 0.74726 0.85319 1.20985 1.04563 0.94835 1.00661 1.22704 0.91059 0.99893 0.87256 1.67332 1.26715 1.07407 1.22445 1.18574 0.90149 0.89300 0.87507 1.44596 1.54134 1.14601 1.20108 1.22434 0.91002 0.95394 0.87260 0.85974 1.23410 1.01275 0.98638 0.93592 1.20798 1.00171 0.98183 0.85119 0.85825 1.23207 0.82977 1.00848 0.98161 1.70183 1.32169 1.19901 1.03071 1.22748 0.94167 1.04052 1.00046 1.23276 0.99681 1.06011 0.88923 1.43262 1.13810 1.42704 1.16415 1.23586 0.95767 1.03633 0.94848 1.18139 1.07786 0.80905 0.99520 1.91464 1.92254 1.34308 1.94034 1.21421 0.96151 0.94769 0.94446 0.75398 0.87241 1.22709 1.20505 0.79978 0.74645 0.89545 0.89617 0.80558 0.77439 0.72891 0.89192 0.89397 0.83026 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.42 12.78 -148.98 -1.90 -0.48 16 2 C -0.06 0.21 2.84 71.24 0.20 0.41 16 3 Si 0.78 -4.11 29.82 68.60 2.05 -2.07 16 4 C -0.21 0.47 5.40 -19.77 -0.11 0.36 16 5 C 0.15 -0.37 9.84 84.61 0.83 0.46 16 6 N -0.52 -0.33 9.13 -193.03 -1.76 -2.09 16 7 C 0.38 0.38 7.49 133.09 1.00 1.37 16 8 N -0.70 1.79 5.51 -321.49 -1.77 0.02 16 9 C 0.14 -0.62 4.27 45.58 0.19 -0.43 16 10 H 0.12 -0.35 7.41 -2.38 -0.02 -0.37 16 11 C -0.13 0.50 7.38 31.12 0.23 0.73 16 12 C -0.02 0.05 4.28 -11.02 -0.05 0.01 16 13 H 0.12 -0.27 8.14 -2.38 -0.02 -0.29 16 14 C 0.21 0.60 7.36 138.13 1.02 1.61 16 15 N -0.53 -4.99 11.25 -188.13 -2.12 -7.11 16 16 C -0.06 -0.33 11.87 83.52 0.99 0.66 16 17 C -0.04 0.03 12.04 83.09 1.00 1.03 16 18 N -0.56 1.11 5.94 -186.28 -1.11 0.00 16 19 C -0.14 0.82 7.38 31.18 0.23 1.05 16 20 C -0.04 -0.07 7.35 22.58 0.17 0.09 16 21 F -0.14 -0.50 16.65 44.97 0.75 0.25 16 22 C -0.04 -0.01 9.75 22.48 0.22 0.21 16 23 H 0.40 -4.18 8.70 -74.06 -0.64 -4.83 16 24 H 0.11 -0.27 7.96 -2.39 -0.02 -0.29 16 25 H -0.30 -0.85 7.11 99.48 0.71 -0.14 16 26 H -0.28 0.30 7.11 99.48 0.71 1.00 16 27 H 0.18 -1.37 4.88 -2.91 -0.01 -1.38 16 28 H 0.42 -1.77 8.20 -92.71 -0.76 -2.53 16 29 H 0.09 -0.32 8.07 -2.39 -0.02 -0.34 16 30 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 31 H 0.18 0.34 8.06 -2.91 -0.02 0.32 16 32 H 0.21 -1.66 8.06 -2.91 -0.02 -1.68 16 33 H 0.43 -3.44 7.54 -92.70 -0.70 -4.14 16 34 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 35 H 0.09 -0.68 6.64 -2.39 -0.02 -0.70 16 36 H 0.15 -0.14 8.06 -2.91 -0.02 -0.17 16 Total: 0.00 -19.43 310.52 -0.85 -20.28 By element: Atomic # 1 Polarization: -15.47 SS G_CDS: -0.90 Total: -16.38 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: 5.92 Total: 7.58 kcal Atomic # 7 Polarization: -2.42 SS G_CDS: -6.76 Total: -9.18 kcal Atomic # 8 Polarization: 1.42 SS G_CDS: -1.90 Total: -0.48 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.75 Total: 0.25 kcal Atomic # 14 Polarization: -4.11 SS G_CDS: 2.05 Total: -2.07 kcal Total: -19.43 -0.85 -20.28 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14771900_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.131 kcal (2) G-P(sol) polarization free energy of solvation -19.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.703 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.848 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.276 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.855 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds