Wall clock time and date at job start Mon Mar 8 2021 05:33:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.38409 * 120.00056 * 2 1 4 4 N 1.32490 * 119.21406 * 0.02562 * 3 2 1 5 5 C 1.32277 * 120.74084 * 179.97438 * 4 3 2 6 6 C 1.38601 * 119.19415 * 359.97438 * 5 4 3 7 7 C 1.50707 * 120.72043 * 179.97438 * 6 5 4 8 8 O 1.42903 * 109.46442 * 65.00331 * 7 6 5 9 9 Si 1.86293 * 109.47256 * 184.99897 * 7 6 5 10 10 C 1.38603 * 118.56084 * 0.25196 * 6 5 4 11 11 N 1.32272 * 119.19766 * 359.51678 * 10 6 5 12 12 C 1.46501 * 120.00031 * 180.02562 * 2 1 3 13 13 H 1.09009 * 112.84657 * 191.19479 * 12 2 1 14 14 C 1.53784 * 113.61379 * 322.49559 * 12 2 1 15 15 C 1.53781 * 87.07855 * 89.11993 * 14 12 2 16 16 H 1.08998 * 113.69257 * 270.87749 * 15 14 12 17 17 C 1.50703 * 113.61372 * 139.98085 * 15 14 12 18 18 C 1.38232 * 119.99626 * 322.22838 * 17 15 14 19 19 C 1.38242 * 119.99485 * 179.76640 * 18 17 15 20 20 C 1.38238 * 120.00036 * 0.48397 * 19 18 17 21 21 C 1.38233 * 119.99835 * 359.79279 * 20 19 18 22 22 C 1.38237 * 119.99606 * 142.50170 * 17 15 14 23 23 C 1.53771 * 113.61783 * 59.99732 * 12 2 1 24 24 H 1.08996 * 109.47570 * 89.99514 * 1 2 3 25 25 H 1.09004 * 109.46790 * 209.99414 * 1 2 3 26 26 H 1.08995 * 109.47413 * 329.99381 * 1 2 3 27 27 H 1.08002 * 120.40129 * 180.02562 * 5 4 3 28 28 H 1.08999 * 109.47345 * 305.00401 * 7 6 5 29 29 H 0.96700 * 114.00311 * 60.00230 * 8 7 6 30 30 H 1.48506 * 109.99973 * 180.02562 * 9 7 6 31 31 H 1.48493 * 110.00375 * 301.32185 * 9 7 6 32 32 H 1.08002 * 120.39772 * 179.71895 * 10 6 5 33 33 H 1.09004 * 113.61129 * 203.66879 * 14 12 2 34 34 H 1.08998 * 113.61420 * 334.57342 * 14 12 2 35 35 H 1.07997 * 120.00344 * 0.02562 * 18 17 15 36 36 H 1.07998 * 119.99718 * 180.25480 * 19 18 17 37 37 H 1.07996 * 119.99923 * 179.76881 * 20 19 18 38 38 H 1.08005 * 119.99944 * 179.97438 * 21 20 19 39 39 H 1.07992 * 120.00351 * 0.02562 * 22 17 15 40 40 H 1.09005 * 113.62024 * 25.43057 * 23 12 2 41 41 H 1.09005 * 113.61911 * 156.25397 * 23 12 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1570 1.1987 0.0000 4 7 1.4789 2.3369 0.0005 5 6 2.1095 3.4996 0.0010 6 6 3.4954 3.5171 0.0016 7 6 4.2490 4.8222 0.0016 8 8 3.9935 5.5195 1.2225 9 14 6.0748 4.4852 -0.1506 10 6 4.1733 2.3081 -0.0038 11 7 3.4818 1.1806 0.0005 12 6 2.1975 -1.2687 -0.0006 13 1 3.2625 -1.1426 0.1945 14 6 1.5374 -2.3615 0.8568 15 6 0.7441 -2.7578 -0.3996 16 1 -0.1986 -2.2217 -0.5095 17 6 0.5942 -4.2472 -0.5741 18 6 1.6395 -5.0901 -0.2458 19 6 1.5003 -6.4566 -0.4013 20 6 0.3195 -6.9794 -0.8946 21 6 -0.7237 -6.1360 -1.2283 22 6 -0.5864 -4.7698 -1.0678 23 6 1.8954 -2.1540 -1.2211 24 1 -0.3634 0.0001 -1.0276 25 1 -0.3633 -0.8901 0.5138 26 1 -0.3634 0.8899 0.5139 27 1 1.5513 4.4242 0.0019 28 1 3.9205 5.4315 -0.8404 29 1 4.2614 5.0353 2.0155 30 1 6.8292 5.7644 -0.1512 31 1 6.5288 3.6289 0.9744 32 1 5.2531 2.2871 -0.0081 33 1 2.2323 -3.1303 1.1950 34 1 0.9147 -1.9691 1.6607 35 1 2.5633 -4.6814 0.1362 36 1 2.3154 -7.1155 -0.1409 37 1 0.2121 -8.0467 -1.0196 38 1 -1.6461 -6.5444 -1.6141 39 1 -1.4012 -4.1109 -1.3288 40 1 1.5615 -1.5941 -2.0948 41 1 2.6886 -2.8651 -1.4519 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14797358_12175864.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:33:00 Heat of formation + Delta-G solvation = 100.336774 kcal Electronic energy + Delta-G solvation = -23277.812200 eV Core-core repulsion = 19933.122647 eV Total energy + Delta-G solvation = -3344.689553 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.142 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.22654 -41.28903 -39.39712 -38.10818 -35.97868 -34.67727 -32.71527 -31.90426 -31.55184 -28.76089 -26.97941 -26.75417 -25.54075 -25.02888 -23.63469 -23.07216 -21.85241 -20.45899 -19.12536 -18.50719 -18.04158 -17.86584 -16.83116 -16.69169 -16.32778 -16.11113 -15.93426 -15.76880 -15.59960 -14.95722 -14.63800 -14.54210 -14.36341 -14.17521 -14.01322 -13.98160 -13.53809 -13.17798 -13.07134 -13.02117 -12.64781 -12.23357 -12.10819 -11.83494 -11.81503 -11.70292 -11.59393 -11.21231 -11.04694 -10.68846 -9.96351 -9.81025 -9.56095 -8.88328 -5.02530 0.07978 0.19135 0.44212 0.50970 1.22217 1.51660 1.56157 1.91367 2.81122 2.84995 3.12623 3.32183 3.41824 3.53361 3.65803 3.67860 3.70678 3.73429 3.92523 3.98891 4.11230 4.16835 4.20996 4.24546 4.25200 4.51210 4.54152 4.57750 4.58736 4.66297 4.68392 4.74814 4.79239 4.89872 4.94568 4.97167 5.09673 5.13753 5.16434 5.32919 5.58505 5.64524 5.70435 5.83924 5.89288 6.11046 6.34470 6.39432 7.26805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.090 3.910 2 N -0.565 5.565 3 C 0.570 3.430 4 N -0.567 5.567 5 C 0.223 3.777 6 C -0.294 4.294 7 C -0.052 4.052 8 O -0.530 6.530 9 Si 0.679 3.321 10 C 0.198 3.802 11 N -0.562 5.562 12 C 0.134 3.866 13 H 0.116 0.884 14 C -0.143 4.143 15 C -0.081 4.081 16 H 0.104 0.896 17 C -0.071 4.071 18 C -0.118 4.118 19 C -0.118 4.118 20 C -0.125 4.125 21 C -0.118 4.118 22 C -0.117 4.117 23 C -0.139 4.139 24 H 0.055 0.945 25 H 0.078 0.922 26 H 0.082 0.918 27 H 0.170 0.830 28 H 0.120 0.880 29 H 0.376 0.624 30 H -0.253 1.253 31 H -0.258 1.258 32 H 0.166 0.834 33 H 0.100 0.900 34 H 0.076 0.924 35 H 0.122 0.878 36 H 0.122 0.878 37 H 0.121 0.879 38 H 0.121 0.879 39 H 0.120 0.880 40 H 0.073 0.927 41 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.513 -1.733 -1.257 2.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.279 5.279 3 C 0.215 3.785 4 N -0.288 5.288 5 C 0.055 3.945 6 C -0.302 4.302 7 C -0.164 4.164 8 O -0.336 6.336 9 Si 0.580 3.420 10 C 0.030 3.970 11 N -0.284 5.284 12 C 0.029 3.971 13 H 0.134 0.866 14 C -0.181 4.181 15 C -0.099 4.099 16 H 0.122 0.878 17 C -0.071 4.071 18 C -0.135 4.135 19 C -0.136 4.136 20 C -0.143 4.143 21 C -0.136 4.136 22 C -0.135 4.135 23 C -0.178 4.178 24 H 0.073 0.927 25 H 0.097 0.903 26 H 0.100 0.900 27 H 0.187 0.813 28 H 0.137 0.863 29 H 0.223 0.777 30 H -0.178 1.178 31 H -0.183 1.183 32 H 0.183 0.817 33 H 0.118 0.882 34 H 0.094 0.906 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.139 0.861 39 H 0.138 0.862 40 H 0.092 0.908 41 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.431 -2.269 -1.292 2.646 hybrid contribution -0.083 0.751 1.060 1.302 sum 0.349 -1.518 -0.233 1.574 Atomic orbital electron populations 1.21879 0.77636 1.03625 1.02094 1.45708 1.05513 1.00926 1.75760 1.19270 0.85247 0.86248 0.87740 1.67988 1.40768 0.97830 1.22241 1.22853 0.90936 0.95159 0.85535 1.21631 0.97083 0.97470 1.14029 1.24663 1.10004 0.91923 0.89788 1.86612 1.84930 1.46682 1.15387 0.95178 0.74332 0.82593 0.89884 1.22831 0.99889 0.86527 0.87721 1.67904 1.06906 1.31376 1.22185 1.21952 0.97406 0.81249 0.96495 0.86635 1.23542 0.99782 0.98046 0.96770 1.21866 0.99158 0.91781 0.97119 0.87846 1.19714 0.93983 0.94713 0.98699 1.21015 0.98649 0.93327 1.00554 1.21180 0.97789 0.95266 0.99323 1.21196 0.93720 0.99915 0.99454 1.21186 0.98979 0.93605 0.99815 1.21071 0.97302 0.95320 0.99828 1.23494 0.98195 0.98551 0.97562 0.92655 0.90340 0.89971 0.81314 0.86258 0.77679 1.17789 1.18251 0.81701 0.88165 0.90570 0.85993 0.86024 0.86106 0.86053 0.86198 0.90828 0.88568 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.03 8.84 59.84 0.53 0.50 16 2 N -0.56 -0.71 3.18 -175.35 -0.56 -1.27 16 3 C 0.57 1.67 8.17 -322.80 -2.64 -0.97 16 4 N -0.57 -1.62 9.11 -13.93 -0.13 -1.75 16 5 C 0.22 0.23 10.99 -17.23 -0.19 0.04 16 6 C -0.29 0.01 5.36 -104.35 -0.56 -0.55 16 7 C -0.05 0.06 2.83 36.01 0.10 0.16 16 8 O -0.53 -0.17 12.85 -35.23 -0.45 -0.62 16 9 Si 0.68 -1.23 29.94 -169.99 -5.09 -6.32 16 10 C 0.20 0.10 9.92 -17.23 -0.17 -0.08 16 11 N -0.56 -1.43 9.00 -13.93 -0.13 -1.55 16 12 C 0.13 0.00 4.47 -67.12 -0.30 -0.30 16 13 H 0.12 0.08 7.11 -51.92 -0.37 -0.29 16 14 C -0.14 0.15 6.67 -25.92 -0.17 -0.02 16 15 C -0.08 0.08 3.31 -90.96 -0.30 -0.23 16 16 H 0.10 -0.14 5.51 -51.93 -0.29 -0.43 16 17 C -0.07 -0.03 5.29 -104.62 -0.55 -0.58 16 18 C -0.12 -0.03 8.60 -39.58 -0.34 -0.37 16 19 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 20 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 21 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 22 C -0.12 -0.07 9.71 -39.58 -0.38 -0.46 16 23 C -0.14 0.08 7.21 -25.92 -0.19 -0.10 16 24 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 25 H 0.08 -0.13 4.83 -51.93 -0.25 -0.38 16 26 H 0.08 0.04 7.33 -51.93 -0.38 -0.34 16 27 H 0.17 -0.13 8.06 -52.49 -0.42 -0.56 16 28 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 29 H 0.38 -0.83 8.70 45.56 0.40 -0.44 16 30 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 31 H -0.26 0.00 7.03 56.52 0.40 0.40 16 32 H 0.17 -0.31 5.01 -52.49 -0.26 -0.57 16 33 H 0.10 -0.17 6.32 -51.93 -0.33 -0.49 16 34 H 0.08 -0.05 7.36 -51.93 -0.38 -0.43 16 35 H 0.12 -0.15 6.67 -52.49 -0.35 -0.50 16 36 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 37 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 39 H 0.12 -0.10 8.05 -52.49 -0.42 -0.52 16 40 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 41 H 0.10 -0.09 7.72 -51.93 -0.40 -0.49 16 LS Contribution 330.85 15.07 4.99 4.99 Total: 0.00 -6.14 330.85 -12.92 -19.05 By element: Atomic # 1 Polarization: -2.99 SS G_CDS: -5.19 Total: -8.18 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -6.36 Total: -4.36 kcal Atomic # 7 Polarization: -3.76 SS G_CDS: -0.81 Total: -4.57 kcal Atomic # 8 Polarization: -0.17 SS G_CDS: -0.45 Total: -0.62 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.09 Total: -6.32 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -6.14 -12.92 -19.05 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14797358_12175864.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.390 kcal (2) G-P(sol) polarization free energy of solvation -6.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.253 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.053 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.337 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds