Wall clock time and date at job start Mon Mar 8 2021 05:33:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.38999 * 119.99611 * 2 1 4 4 N 1.32408 * 119.70761 * 349.39322 * 3 2 1 5 5 C 1.31976 * 121.62098 * 179.73102 * 4 3 2 6 6 C 1.38015 * 120.85570 * 0.54009 * 5 4 3 7 7 C 1.50701 * 120.33730 * 179.72152 * 6 5 4 8 8 O 1.42894 * 109.47810 * 244.72954 * 7 6 5 9 9 Si 1.86305 * 109.46704 * 4.72757 * 7 6 5 10 10 C 1.38889 * 119.33264 * 359.45330 * 6 5 4 11 11 C 1.38294 * 118.50174 * 0.27666 * 10 6 5 12 12 C 1.46492 * 120.00170 * 180.02562 * 2 1 3 13 13 H 1.09003 * 112.84789 * 175.85431 * 12 2 1 14 14 C 1.53786 * 113.61289 * 307.04757 * 12 2 1 15 15 C 1.53788 * 87.07811 * 89.12096 * 14 12 2 16 16 H 1.09000 * 113.61007 * 270.79407 * 15 14 12 17 17 C 1.50693 * 113.61273 * 139.98284 * 15 14 12 18 18 C 1.38242 * 120.00130 * 299.72122 * 17 15 14 19 19 C 1.38235 * 119.99853 * 179.77118 * 18 17 15 20 20 C 1.38238 * 120.00260 * 0.48280 * 19 18 17 21 21 C 1.38238 * 119.99667 * 359.79415 * 20 19 18 22 22 C 1.38232 * 120.00420 * 359.95312 * 21 20 19 23 23 C 1.53775 * 87.08171 * 25.42938 * 15 14 12 24 24 H 1.08995 * 109.47209 * 96.06948 * 1 2 3 25 25 H 1.09006 * 109.46823 * 216.06673 * 1 2 3 26 26 H 1.09004 * 109.47335 * 336.06497 * 1 2 3 27 27 H 1.07994 * 119.56826 * 180.28965 * 5 4 3 28 28 H 1.09001 * 109.47170 * 124.72402 * 7 6 5 29 29 H 0.96704 * 113.99760 * 59.99592 * 8 7 6 30 30 H 1.48500 * 110.00035 * 179.97438 * 9 7 6 31 31 H 1.48494 * 110.00160 * 301.31827 * 9 7 6 32 32 H 1.07999 * 120.74593 * 180.24949 * 10 6 5 33 33 H 1.08004 * 120.45241 * 179.97438 * 11 10 6 34 34 H 1.09002 * 113.61556 * 203.66209 * 14 12 2 35 35 H 1.08988 * 113.61649 * 334.48769 * 14 12 2 36 36 H 1.07997 * 119.99528 * 0.02562 * 18 17 15 37 37 H 1.07997 * 119.99766 * 180.25300 * 19 18 17 38 38 H 1.07995 * 120.00250 * 179.77163 * 20 19 18 39 39 H 1.07999 * 119.99933 * 179.97438 * 21 20 19 40 40 H 1.07991 * 120.00544 * 180.02562 * 22 21 20 41 41 H 1.09001 * 113.61642 * 220.01418 * 23 15 14 42 42 H 1.09007 * 113.61455 * 89.11790 * 23 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1600 1.2038 0.0000 4 7 1.5090 2.3372 -0.2117 5 6 2.1301 3.5017 -0.2146 6 6 3.4923 3.5779 -0.0063 7 6 4.1906 4.9133 -0.0183 8 8 5.1025 4.9644 -1.1173 9 14 2.9286 6.2724 -0.1951 10 6 4.2123 2.4120 0.2200 11 6 3.5334 1.2072 0.2227 12 6 2.1975 -1.2686 -0.0006 13 1 3.2768 -1.1342 -0.0731 14 6 1.7704 -2.2271 1.1237 15 6 0.7149 -2.7749 0.1484 16 1 -0.2359 -2.2436 0.1906 17 6 0.5524 -4.2716 0.2131 18 6 1.6265 -5.0962 -0.0651 19 6 1.4785 -6.4691 -0.0011 20 6 0.2540 -7.0177 0.3314 21 6 -0.8216 -6.1931 0.6040 22 6 -0.6724 -4.8202 0.5451 23 6 1.6359 -2.3038 -0.9894 24 1 -0.3633 -0.1087 -1.0218 25 1 -0.3633 -0.8308 0.6051 26 1 -0.3634 0.9393 0.4169 27 1 1.5657 4.4063 -0.3862 28 1 4.7384 5.0453 0.9148 29 1 4.6832 4.8538 -1.9817 30 1 3.6044 7.5946 -0.2076 31 1 2.1533 6.0858 -1.4478 32 1 5.2783 2.4455 0.3896 33 1 4.0621 0.2813 0.3950 34 1 2.5364 -2.9547 1.3917 35 1 1.3451 -1.7214 1.9904 36 1 2.5822 -4.6677 -0.3284 37 1 2.3187 -7.1133 -0.2144 38 1 0.1375 -8.0903 0.3778 39 1 -1.7784 -6.6217 0.8634 40 1 -1.5124 -4.1760 0.7585 41 1 1.1008 -1.8602 -1.8290 42 1 2.3653 -3.0524 -1.2990 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14797358_13915762.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:33:03 Heat of formation + Delta-G solvation = 86.624107 kcal Electronic energy + Delta-G solvation = -23120.863776 eV Core-core repulsion = 19841.005508 eV Total energy + Delta-G solvation = -3279.858268 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.147 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.91188 -40.97544 -39.37911 -37.93887 -35.78609 -33.41500 -32.16352 -31.89445 -31.46823 -28.54248 -26.84249 -26.77195 -25.12842 -24.11951 -23.63303 -22.87604 -21.72104 -20.32220 -18.78546 -18.36120 -17.79931 -17.49150 -16.71018 -16.40394 -16.27017 -16.20413 -15.78831 -15.72682 -15.52531 -14.84365 -14.38211 -14.32360 -14.27633 -14.11950 -14.08385 -13.99100 -13.38373 -13.29436 -13.21033 -13.07346 -12.63870 -12.44415 -12.11272 -11.92528 -11.83284 -11.50936 -11.22274 -10.89503 -10.68593 -10.51409 -10.30127 -9.83604 -9.58264 -8.54313 -4.94342 0.24725 0.41329 0.44081 0.48487 1.31557 1.60578 1.79014 1.98510 2.80485 2.84604 3.30899 3.41638 3.52395 3.59825 3.61594 3.78843 3.85292 3.90207 3.94971 4.06102 4.08401 4.12929 4.21853 4.24246 4.35648 4.43982 4.55294 4.57327 4.60015 4.63427 4.63816 4.75340 4.77810 4.87231 4.91696 4.95111 5.01777 5.09912 5.11894 5.16267 5.34576 5.55824 5.57097 5.62229 5.69310 5.95858 6.08541 6.37213 6.43456 7.14599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.087 3.913 2 N -0.591 5.591 3 C 0.410 3.590 4 N -0.536 5.536 5 C 0.153 3.847 6 C -0.232 4.232 7 C -0.059 4.059 8 O -0.532 6.532 9 Si 0.679 3.321 10 C -0.006 4.006 11 C -0.236 4.236 12 C 0.129 3.871 13 H 0.103 0.897 14 C -0.142 4.142 15 C -0.083 4.083 16 H 0.108 0.892 17 C -0.072 4.072 18 C -0.118 4.118 19 C -0.118 4.118 20 C -0.125 4.125 21 C -0.117 4.117 22 C -0.117 4.117 23 C -0.143 4.143 24 H 0.050 0.950 25 H 0.073 0.927 26 H 0.080 0.920 27 H 0.155 0.845 28 H 0.116 0.884 29 H 0.375 0.625 30 H -0.256 1.256 31 H -0.258 1.258 32 H 0.136 0.864 33 H 0.135 0.865 34 H 0.096 0.904 35 H 0.076 0.924 36 H 0.121 0.879 37 H 0.122 0.878 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.120 0.880 41 H 0.076 0.924 42 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.887 -2.218 1.677 2.918 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.303 5.303 3 C 0.176 3.824 4 N -0.252 5.252 5 C -0.004 4.004 6 C -0.238 4.238 7 C -0.170 4.170 8 O -0.338 6.338 9 Si 0.581 3.419 10 C -0.032 4.032 11 C -0.261 4.261 12 C 0.024 3.976 13 H 0.121 0.879 14 C -0.180 4.180 15 C -0.101 4.101 16 H 0.126 0.874 17 C -0.072 4.072 18 C -0.136 4.136 19 C -0.136 4.136 20 C -0.143 4.143 21 C -0.135 4.135 22 C -0.135 4.135 23 C -0.182 4.182 24 H 0.068 0.932 25 H 0.091 0.909 26 H 0.099 0.901 27 H 0.172 0.828 28 H 0.134 0.866 29 H 0.223 0.777 30 H -0.181 1.181 31 H -0.183 1.183 32 H 0.153 0.847 33 H 0.152 0.848 34 H 0.114 0.886 35 H 0.095 0.905 36 H 0.139 0.861 37 H 0.140 0.860 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.138 0.862 41 H 0.095 0.905 42 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -1.750 -1.642 1.526 2.844 hybrid contribution 1.246 -0.588 -0.931 1.663 sum -0.504 -2.230 0.595 2.362 Atomic orbital electron populations 1.21865 0.78760 1.03343 1.01534 1.45986 1.05453 1.01199 1.77620 1.18329 0.88194 0.86045 0.89843 1.67187 1.40067 0.97483 1.20479 1.22278 0.91073 0.94523 0.92530 1.20925 0.95357 0.96877 1.10601 1.24754 0.99880 0.99638 0.92707 1.86594 1.35722 1.94610 1.16891 0.95114 0.80754 0.77495 0.88579 1.21195 1.00047 0.90717 0.91210 1.21530 0.93758 0.99649 1.11128 1.21955 0.96533 0.82241 0.96914 0.87900 1.23526 0.98853 0.98301 0.97353 1.21944 0.99283 0.91657 0.97192 0.87397 1.19722 0.93641 0.94720 0.99071 1.21006 0.98567 0.93413 1.00617 1.21178 0.97620 0.95107 0.99658 1.21200 0.93226 0.99963 0.99872 1.21189 0.98957 0.93671 0.99726 1.21074 0.96987 0.95165 1.00277 1.23522 0.99398 0.98061 0.97178 0.93160 0.90906 0.90124 0.82842 0.86609 0.77741 1.18090 1.18344 0.84662 0.84776 0.88571 0.90495 0.86067 0.86035 0.86088 0.86026 0.86179 0.90521 0.88403 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.03 9.10 59.85 0.54 0.52 16 2 N -0.59 -0.25 3.20 -173.15 -0.55 -0.80 16 3 C 0.41 0.82 7.32 -155.02 -1.14 -0.32 16 4 N -0.54 -1.52 9.15 -12.44 -0.11 -1.63 16 5 C 0.15 0.20 9.84 -17.57 -0.17 0.03 16 6 C -0.23 -0.15 5.36 -104.46 -0.56 -0.71 16 7 C -0.06 0.01 2.82 36.01 0.10 0.11 16 8 O -0.53 -0.72 12.84 -35.23 -0.45 -1.17 16 9 Si 0.68 -0.53 29.90 -169.99 -5.08 -5.62 16 10 C -0.01 0.00 9.84 -39.32 -0.39 -0.39 16 11 C -0.24 -0.19 9.29 -39.23 -0.36 -0.55 16 12 C 0.13 -0.17 4.34 -67.12 -0.29 -0.46 16 13 H 0.10 -0.21 5.77 -51.93 -0.30 -0.51 16 14 C -0.14 0.24 6.92 -25.91 -0.18 0.06 16 15 C -0.08 0.11 3.33 -90.96 -0.30 -0.19 16 16 H 0.11 -0.18 5.04 -51.93 -0.26 -0.44 16 17 C -0.07 0.00 5.29 -104.62 -0.55 -0.56 16 18 C -0.12 0.00 8.62 -39.58 -0.34 -0.34 16 19 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 20 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 21 C -0.12 -0.06 10.05 -39.58 -0.40 -0.45 16 22 C -0.12 -0.05 9.71 -39.58 -0.38 -0.43 16 23 C -0.14 0.21 6.86 -25.92 -0.18 0.04 16 24 H 0.05 -0.01 8.14 -51.93 -0.42 -0.43 16 25 H 0.07 -0.13 4.88 -51.93 -0.25 -0.38 16 26 H 0.08 0.05 7.36 -51.93 -0.38 -0.33 16 27 H 0.15 -0.08 4.85 -52.49 -0.25 -0.33 16 28 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 29 H 0.38 -0.47 8.70 45.56 0.40 -0.07 16 30 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 31 H -0.26 -0.30 7.02 56.52 0.40 0.10 16 32 H 0.14 -0.07 8.06 -52.49 -0.42 -0.50 16 33 H 0.13 -0.14 5.99 -52.48 -0.31 -0.45 16 34 H 0.10 -0.20 7.73 -51.93 -0.40 -0.60 16 35 H 0.08 -0.07 8.13 -51.94 -0.42 -0.49 16 36 H 0.12 -0.20 6.64 -52.49 -0.35 -0.55 16 37 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 38 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 39 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 40 H 0.12 -0.13 8.05 -52.49 -0.42 -0.55 16 41 H 0.08 -0.04 8.09 -51.93 -0.42 -0.46 16 42 H 0.10 -0.21 6.30 -51.92 -0.33 -0.54 16 LS Contribution 333.86 15.07 5.03 5.03 Total: 0.00 -5.69 333.86 -12.01 -17.70 By element: Atomic # 1 Polarization: -3.52 SS G_CDS: -5.44 Total: -8.97 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -5.40 Total: -4.54 kcal Atomic # 7 Polarization: -1.77 SS G_CDS: -0.67 Total: -2.44 kcal Atomic # 8 Polarization: -0.72 SS G_CDS: -0.45 Total: -1.17 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.08 Total: -5.62 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -5.69 -12.01 -17.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14797358_13915762.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 104.325 kcal (2) G-P(sol) polarization free energy of solvation -5.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.701 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.624 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds