Wall clock time and date at job start Mon Mar 8 2021 05:33:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46891 * 1 3 3 C 1.39148 * 111.00087 * 2 1 4 4 N 1.32329 * 119.72065 * 236.04833 * 3 2 1 5 5 C 1.32007 * 121.64962 * 179.97438 * 4 3 2 6 6 C 1.37988 * 120.89891 * 359.97438 * 5 4 3 7 7 C 1.50703 * 120.32558 * 180.02562 * 6 5 4 8 8 O 1.42906 * 109.46725 * 120.00584 * 7 6 5 9 9 Si 1.86294 * 109.47245 * 0.02562 * 7 6 5 10 10 C 1.38908 * 119.34545 * 0.02562 * 6 5 4 11 11 C 1.38446 * 118.48290 * 359.74334 * 10 6 5 12 12 F 1.35099 * 120.46977 * 180.27052 * 11 10 6 13 13 C 1.46908 * 111.00234 * 236.04997 * 2 1 3 14 14 H 1.09000 * 112.84854 * 60.13347 * 13 2 1 15 15 C 1.53777 * 113.61794 * 191.33336 * 13 2 1 16 16 C 1.53781 * 87.07981 * 89.11242 * 15 13 2 17 17 H 1.08999 * 113.61954 * 270.88110 * 16 15 13 18 18 C 1.50705 * 113.61146 * 140.06496 * 16 15 13 19 19 C 1.38237 * 120.00177 * 299.72929 * 18 16 15 20 20 C 1.38228 * 119.99883 * 179.76614 * 19 18 16 21 21 C 1.38234 * 120.00141 * 0.48360 * 20 19 18 22 22 C 1.38235 * 120.00083 * 359.79085 * 21 20 19 23 23 C 1.38234 * 119.99897 * 359.95695 * 22 21 20 24 24 C 1.53771 * 87.08250 * 25.43328 * 16 15 13 25 25 H 1.09003 * 109.47224 * 177.46706 * 1 2 3 26 26 H 1.08997 * 109.47661 * 57.46728 * 1 2 3 27 27 H 1.08998 * 109.47536 * 297.46377 * 1 2 3 28 28 H 1.08001 * 119.55145 * 179.97438 * 5 4 3 29 29 H 1.09001 * 109.46812 * 240.00065 * 7 6 5 30 30 H 0.96700 * 113.99404 * 299.99701 * 8 7 6 31 31 H 1.48501 * 109.99817 * 58.67927 * 9 7 6 32 32 H 1.48494 * 109.99756 * 179.97438 * 9 7 6 33 33 H 1.07998 * 120.75678 * 179.97438 * 10 6 5 34 34 H 1.08999 * 113.61633 * 203.66668 * 15 13 2 35 35 H 1.09001 * 113.61021 * 334.48355 * 15 13 2 36 36 H 1.08000 * 119.99719 * 359.97438 * 19 18 16 37 37 H 1.08005 * 120.00206 * 180.25280 * 20 19 18 38 38 H 1.08003 * 120.00417 * 179.77213 * 21 20 19 39 39 H 1.07996 * 120.00072 * 179.97438 * 22 21 20 40 40 H 1.08006 * 120.00324 * 180.02562 * 23 22 21 41 41 H 1.08998 * 113.61651 * 220.01255 * 24 16 15 42 42 H 1.09003 * 113.61635 * 89.11422 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9676 1.2990 0.0000 4 7 2.8019 1.6815 -0.9533 5 6 3.2975 2.9044 -0.9904 6 6 2.9602 3.8352 -0.0292 7 6 3.5332 5.2280 -0.0844 8 8 2.4700 6.1763 -0.1957 9 14 4.6567 5.3791 -1.5627 10 6 2.0873 3.4757 0.9898 11 6 1.5795 2.1878 1.0005 12 9 0.7232 1.7971 1.9697 13 6 1.9954 -0.7659 -1.1377 14 1 1.6801 -0.3641 -2.1006 15 6 3.5059 -1.0403 -1.0494 16 6 3.1482 -2.3240 -0.2821 17 1 3.0728 -2.1818 0.7960 18 6 4.0001 -3.5091 -0.6577 19 6 4.0070 -3.9701 -1.9609 20 6 4.7921 -5.0540 -2.3064 21 6 5.5627 -5.6833 -1.3467 22 6 5.5514 -5.2259 -0.0423 23 6 4.7703 -4.1386 0.3022 24 6 1.7916 -2.2844 -1.0050 25 1 -0.3634 -1.0267 -0.0454 26 1 -0.3634 0.5526 -0.8664 27 1 -0.3634 0.4739 0.9118 28 1 3.9762 3.1803 -1.7839 29 1 4.1008 5.4236 0.8254 30 1 1.9218 6.0618 -0.9840 31 1 3.9017 5.0836 -2.8068 32 1 5.2277 6.7483 -1.6287 33 1 1.8082 4.1859 1.7541 34 1 3.9734 -1.2255 -2.0165 35 1 4.0483 -0.3088 -0.4504 36 1 3.4016 -3.4812 -2.7098 37 1 4.8007 -5.4117 -3.3255 38 1 6.1733 -6.5325 -1.6158 39 1 6.1531 -5.7177 0.7077 40 1 4.7618 -3.7809 1.3213 41 1 0.9497 -2.5581 -0.3691 42 1 1.7903 -2.8098 -1.9601 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14797358_17656566.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:33:12 Heat of formation + Delta-G solvation = 39.737073 kcal Electronic energy + Delta-G solvation = -25994.749500 eV Core-core repulsion = 22243.404082 eV Total energy + Delta-G solvation = -3751.345418 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.138 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.00818 -42.04953 -40.86068 -39.38932 -38.06294 -36.39485 -33.51238 -32.13694 -31.74189 -31.39995 -28.26131 -26.73302 -26.32588 -25.34480 -24.70108 -23.46270 -22.92599 -22.00976 -20.01450 -19.12147 -18.38573 -18.31786 -17.86802 -17.62125 -17.15936 -16.64477 -16.28903 -16.23217 -15.95072 -15.82695 -15.46826 -15.40581 -14.81608 -14.45712 -14.42129 -14.35277 -14.08161 -13.93091 -13.89608 -13.70534 -13.29036 -12.87604 -12.82547 -12.59967 -12.45564 -12.19962 -12.08572 -11.66145 -11.52570 -11.26495 -11.02807 -10.81049 -10.65212 -10.56061 -9.73529 -9.45374 -9.18224 -5.07907 -0.28995 -0.06679 0.52703 0.58531 1.12008 1.47378 1.85466 2.12664 2.41322 2.92671 2.99304 3.13580 3.22768 3.40683 3.52982 3.64174 3.70125 3.81828 3.89406 4.06438 4.09627 4.16330 4.18941 4.26563 4.29981 4.33132 4.37588 4.43884 4.57206 4.64698 4.68900 4.71244 4.74540 4.82473 4.83431 4.93781 5.11399 5.13363 5.19719 5.21239 5.26595 5.29336 5.63047 5.67969 5.71823 5.85108 5.93897 6.19023 6.24151 6.67705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 N -0.458 5.458 3 C 0.298 3.702 4 N -0.481 5.481 5 C 0.122 3.878 6 C -0.174 4.174 7 C -0.067 4.067 8 O -0.528 6.528 9 Si 0.684 3.316 10 C -0.060 4.060 11 C 0.034 3.966 12 F -0.122 7.122 13 C 0.066 3.934 14 H 0.070 0.930 15 C -0.101 4.101 16 C -0.069 4.069 17 H 0.100 0.900 18 C -0.069 4.069 19 C -0.118 4.118 20 C -0.118 4.118 21 C -0.126 4.126 22 C -0.118 4.118 23 C -0.117 4.117 24 C -0.126 4.126 25 H 0.088 0.912 26 H 0.041 0.959 27 H 0.090 0.910 28 H 0.165 0.835 29 H 0.124 0.876 30 H 0.377 0.623 31 H -0.255 1.255 32 H -0.252 1.252 33 H 0.153 0.847 34 H 0.089 0.911 35 H 0.075 0.925 36 H 0.121 0.879 37 H 0.121 0.879 38 H 0.120 0.880 39 H 0.121 0.879 40 H 0.120 0.880 41 H 0.075 0.925 42 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.831 -0.582 -1.498 1.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 N -0.175 5.175 3 C 0.064 3.936 4 N -0.194 5.194 5 C -0.035 4.035 6 C -0.177 4.177 7 C -0.177 4.177 8 O -0.334 6.334 9 Si 0.584 3.416 10 C -0.087 4.087 11 C 0.009 3.991 12 F -0.100 7.100 13 C -0.041 4.041 14 H 0.088 0.912 15 C -0.139 4.139 16 C -0.087 4.087 17 H 0.118 0.882 18 C -0.069 4.069 19 C -0.136 4.136 20 C -0.136 4.136 21 C -0.145 4.145 22 C -0.136 4.136 23 C -0.135 4.135 24 C -0.164 4.164 25 H 0.107 0.893 26 H 0.060 0.940 27 H 0.109 0.891 28 H 0.181 0.819 29 H 0.141 0.859 30 H 0.225 0.775 31 H -0.180 1.180 32 H -0.176 1.176 33 H 0.170 0.830 34 H 0.108 0.892 35 H 0.093 0.907 36 H 0.139 0.861 37 H 0.139 0.861 38 H 0.138 0.862 39 H 0.139 0.861 40 H 0.138 0.862 41 H 0.094 0.906 42 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 1.543 -0.887 -1.881 2.590 hybrid contribution -1.712 1.060 0.147 2.019 sum -0.169 0.173 -1.734 1.751 Atomic orbital electron populations 1.22685 0.83185 1.04250 1.03012 1.58994 1.09435 1.07257 1.41854 1.19971 0.94304 0.89211 0.90089 1.67798 1.11731 1.18021 1.21875 1.22496 0.96379 0.87782 0.96857 1.21081 1.01214 0.98454 0.96995 1.24928 0.94986 0.84945 1.12848 1.86627 1.44110 1.54407 1.48250 0.95029 0.84983 0.85858 0.75727 1.21407 0.94677 0.93993 0.98589 1.18110 0.96819 0.94077 0.90078 1.91484 1.67142 1.91008 1.60410 1.22572 0.97478 0.93185 0.90881 0.91156 1.22924 0.94362 0.95803 1.00819 1.21535 0.94177 0.92461 1.00506 0.88189 1.19792 0.97249 0.96373 0.93509 1.20998 0.99601 0.97097 0.95932 1.21160 0.96830 0.96198 0.99453 1.21175 0.99643 1.00181 0.93452 1.21180 0.99088 0.96837 0.96520 1.21088 0.97013 0.96129 0.99251 1.23203 0.97740 0.94021 1.01411 0.89306 0.94012 0.89118 0.81885 0.85865 0.77525 1.18009 1.17614 0.82971 0.89236 0.90662 0.86113 0.86130 0.86191 0.86125 0.86199 0.90617 0.88827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.12 60.06 0.55 0.54 16 2 N -0.46 -0.44 4.58 -172.42 -0.79 -1.23 16 3 C 0.30 0.48 6.00 -154.86 -0.93 -0.45 16 4 N -0.48 -0.57 7.60 -12.37 -0.09 -0.66 16 5 C 0.12 -0.07 9.84 -17.57 -0.17 -0.24 16 6 C -0.17 0.15 5.40 -104.46 -0.56 -0.42 16 7 C -0.07 0.11 2.84 36.01 0.10 0.21 16 8 O -0.53 0.08 12.78 -35.23 -0.45 -0.37 16 9 Si 0.68 -1.56 29.82 -169.99 -5.07 -6.63 16 10 C -0.06 -0.01 9.75 -39.26 -0.38 -0.39 16 11 C 0.03 0.05 7.01 -39.09 -0.27 -0.22 16 12 F -0.12 -0.28 14.80 2.25 0.03 -0.24 16 13 C 0.07 0.01 2.58 -66.90 -0.17 -0.16 16 14 H 0.07 0.04 8.12 -51.93 -0.42 -0.38 16 15 C -0.10 -0.05 6.48 -25.92 -0.17 -0.21 16 16 C -0.07 -0.03 3.89 -90.96 -0.35 -0.38 16 17 H 0.10 0.12 8.09 -51.93 -0.42 -0.30 16 18 C -0.07 -0.09 5.29 -104.62 -0.55 -0.64 16 19 C -0.12 -0.11 8.63 -39.59 -0.34 -0.45 16 20 C -0.12 -0.12 10.05 -39.59 -0.40 -0.51 16 21 C -0.13 -0.15 10.05 -39.58 -0.40 -0.55 16 22 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 23 C -0.12 -0.18 9.71 -39.58 -0.38 -0.56 16 24 C -0.13 0.07 6.97 -25.92 -0.18 -0.11 16 25 H 0.09 -0.14 6.82 -51.93 -0.35 -0.49 16 26 H 0.04 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.09 0.00 5.79 -51.93 -0.30 -0.30 16 28 H 0.16 -0.44 4.88 -52.49 -0.26 -0.69 16 29 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 30 H 0.38 -1.09 8.70 45.56 0.40 -0.70 16 31 H -0.26 0.11 7.11 56.52 0.40 0.51 16 32 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 33 H 0.15 -0.11 8.06 -52.49 -0.42 -0.54 16 34 H 0.09 0.01 7.73 -51.93 -0.40 -0.39 16 35 H 0.07 0.13 7.03 -51.93 -0.37 -0.23 16 36 H 0.12 -0.08 6.65 -52.49 -0.35 -0.43 16 37 H 0.12 -0.08 8.06 -52.48 -0.42 -0.51 16 38 H 0.12 -0.05 8.06 -52.48 -0.42 -0.48 16 39 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 40 H 0.12 0.05 8.06 -52.48 -0.42 -0.38 16 41 H 0.08 -0.04 7.02 -51.93 -0.36 -0.41 16 42 H 0.09 -0.12 6.31 -51.93 -0.33 -0.45 16 LS Contribution 340.94 15.07 5.14 5.14 Total: 0.00 -5.17 340.94 -11.56 -16.73 By element: Atomic # 1 Polarization: -2.33 SS G_CDS: -5.31 Total: -7.64 kcal Atomic # 6 Polarization: -0.08 SS G_CDS: -5.02 Total: -5.10 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: -0.88 Total: -1.89 kcal Atomic # 8 Polarization: 0.08 SS G_CDS: -0.45 Total: -0.37 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.03 Total: -0.24 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.07 Total: -6.63 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -5.17 -11.56 -16.73 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14797358_17656566.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.468 kcal (2) G-P(sol) polarization free energy of solvation -5.168 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.563 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.731 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.737 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds