Wall clock time and date at job start Mon Mar 8 2021 06:38:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38603 * 120.71813 * 244.72021 * 4 2 1 6 6 N 1.32272 * 119.19766 * 179.79387 * 5 4 2 7 7 C 1.32495 * 120.73736 * 0.47267 * 6 5 4 8 8 N 1.38409 * 119.21855 * 179.76096 * 7 6 5 9 9 C 1.46501 * 119.99913 * 0.02562 * 8 7 6 10 10 H 1.09003 * 112.84744 * 336.20413 * 9 8 7 11 11 C 1.53783 * 113.61396 * 107.50754 * 9 8 7 12 12 C 1.53776 * 87.08094 * 139.98331 * 11 9 8 13 13 H 1.08998 * 113.69088 * 89.12726 * 12 11 9 14 14 C 1.52996 * 113.61301 * 220.01905 * 12 11 9 15 15 N 1.46503 * 109.47519 * 272.49939 * 14 12 11 16 16 C 1.35305 * 125.87340 * 124.71212 * 15 14 12 17 17 C 1.35346 * 106.17859 * 179.91076 * 16 15 14 18 18 N 1.33772 * 106.49468 * 0.35057 * 17 16 15 19 19 N 1.28628 * 108.88663 * 359.77562 * 18 17 16 20 20 C 1.53776 * 113.61840 * 205.00491 * 9 8 7 21 21 N 1.32490 * 121.56739 * 359.77420 * 7 6 5 22 22 C 1.32277 * 120.74084 * 359.97438 * 21 7 6 23 23 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 24 24 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 25 25 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 26 26 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 27 27 H 1.08002 * 120.39772 * 359.97438 * 5 4 2 28 28 H 0.97000 * 120.00272 * 180.02562 * 8 7 6 29 29 H 1.08997 * 113.61313 * 254.53386 * 11 9 8 30 30 H 1.09002 * 113.61024 * 25.43186 * 11 9 8 31 31 H 1.09004 * 109.47293 * 32.49718 * 14 12 11 32 32 H 1.08996 * 109.47531 * 152.49784 * 14 12 11 33 33 H 1.08003 * 126.91117 * 0.02562 * 16 15 14 34 34 H 1.08007 * 126.75578 * 180.12988 * 17 16 15 35 35 H 1.09002 * 113.61269 * 334.56944 * 20 9 8 36 36 H 1.08998 * 113.61479 * 105.46932 * 20 9 8 37 37 H 1.08002 * 120.40470 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6469 -0.0263 2.2006 6 7 3.0698 -0.6786 3.2707 7 6 2.8242 -1.9725 3.4160 8 7 3.2858 -2.6250 4.5460 9 6 4.0357 -1.8852 5.5641 10 1 4.5164 -0.9902 5.1688 11 6 3.2409 -1.6396 6.8575 12 6 4.5424 -1.9371 7.6207 13 1 5.1621 -1.0565 7.7897 14 6 4.3334 -2.7686 8.8878 15 7 4.0426 -1.8780 10.0141 16 6 2.9578 -1.9469 10.8198 17 6 3.0916 -0.9442 11.7190 18 7 4.2329 -0.3143 11.4185 19 7 4.7724 -0.8918 10.4036 20 6 4.9743 -2.7695 6.4019 21 7 2.1475 -2.6566 2.5053 22 6 1.6923 -2.0633 1.4143 23 1 -0.3934 0.4418 0.7650 24 1 1.7924 -0.5139 -0.8899 25 1 3.5346 1.7702 0.0322 26 1 1.5616 2.4678 -1.2086 27 1 2.8542 1.0274 2.0853 28 1 3.1128 -3.5721 4.6638 29 1 2.8946 -0.6121 6.9688 30 1 2.4545 -2.3738 7.0327 31 1 3.4974 -3.4523 8.7400 32 1 5.2369 -3.3401 9.1005 33 1 2.1489 -2.6599 10.7589 34 1 2.4093 -0.6985 12.5194 35 1 4.6618 -3.8125 6.4526 36 1 6.0274 -2.6541 6.1453 37 1 1.1416 -2.6263 0.6752 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14927564_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:38:40 Heat of formation + Delta-G solvation = 163.660744 kcal Electronic energy + Delta-G solvation = -21848.376659 eV Core-core repulsion = 18438.381447 eV Total energy + Delta-G solvation = -3409.995212 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.128 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -44.14826 -42.16567 -40.63680 -38.12080 -36.31778 -34.96135 -34.70310 -32.23726 -31.93217 -29.58585 -27.04816 -26.78014 -25.97050 -24.50358 -23.60189 -23.16053 -22.20198 -20.94259 -19.37611 -19.00836 -18.51632 -18.08352 -17.45459 -16.73749 -16.61417 -16.30899 -16.10794 -15.87567 -15.74861 -15.56627 -15.07003 -14.85439 -14.61524 -14.10979 -13.90592 -13.75627 -13.43150 -13.20831 -12.67177 -12.45553 -12.26573 -12.15269 -11.91928 -11.84870 -11.80002 -11.79208 -11.30240 -10.94871 -10.62869 -10.30219 -10.06449 -9.18128 -5.13894 0.01102 0.10903 0.66916 1.19113 1.33282 1.53604 1.70567 1.73585 1.89948 2.75223 3.04474 3.07661 3.20249 3.29316 3.37769 3.50217 3.57323 3.57817 3.66351 3.71488 3.76497 3.86262 4.06590 4.14009 4.15103 4.31916 4.37038 4.45037 4.49529 4.50508 4.65832 4.69579 4.78674 4.82651 4.99628 5.23991 5.26572 5.60617 5.71450 5.93663 6.32891 6.47665 7.23106 7.60983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.046 4.046 3 Si 0.679 3.321 4 C -0.293 4.293 5 C 0.200 3.800 6 N -0.562 5.562 7 C 0.567 3.433 8 N -0.685 5.685 9 C 0.143 3.857 10 H 0.124 0.876 11 C -0.149 4.149 12 C -0.123 4.123 13 H 0.115 0.885 14 C 0.126 3.874 15 N -0.289 5.289 16 C -0.051 4.051 17 C -0.051 4.051 18 N -0.271 5.271 19 N -0.084 5.084 20 C -0.137 4.137 21 N -0.569 5.569 22 C 0.223 3.777 23 H 0.379 0.621 24 H 0.116 0.884 25 H -0.255 1.255 26 H -0.250 1.250 27 H 0.167 0.833 28 H 0.415 0.585 29 H 0.076 0.924 30 H 0.087 0.913 31 H 0.107 0.893 32 H 0.104 0.896 33 H 0.189 0.811 34 H 0.190 0.810 35 H 0.092 0.908 36 H 0.086 0.914 37 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.442 -2.612 -0.053 3.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.158 4.158 3 Si 0.581 3.419 4 C -0.301 4.301 5 C 0.033 3.967 6 N -0.283 5.283 7 C 0.211 3.789 8 N -0.321 5.321 9 C 0.037 3.963 10 H 0.142 0.858 11 C -0.188 4.188 12 C -0.143 4.143 13 H 0.133 0.867 14 C 0.005 3.995 15 N -0.083 5.083 16 C -0.202 4.202 17 C -0.209 4.209 18 N -0.137 5.137 19 N -0.064 5.064 20 C -0.176 4.176 21 N -0.291 5.291 22 C 0.055 3.945 23 H 0.226 0.774 24 H 0.133 0.867 25 H -0.180 1.180 26 H -0.175 1.175 27 H 0.184 0.816 28 H 0.253 0.747 29 H 0.095 0.905 30 H 0.105 0.895 31 H 0.125 0.875 32 H 0.122 0.878 33 H 0.207 0.793 34 H 0.207 0.793 35 H 0.111 0.889 36 H 0.105 0.895 37 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -0.114 -1.925 -0.320 1.955 hybrid contribution -1.397 -1.369 -0.695 2.076 sum -1.511 -3.294 -1.015 3.764 Atomic orbital electron populations 1.86514 1.17112 1.81628 1.49286 1.24704 0.85125 1.09637 0.96381 0.94999 0.81132 0.77745 0.88029 1.21725 1.08932 0.97846 1.01622 1.22777 0.88153 0.99211 0.86591 1.67889 1.27012 1.08320 1.25128 1.19427 0.87036 0.85589 0.86889 1.44169 1.58210 1.11862 1.17814 1.22467 0.92159 0.96333 0.85359 0.85821 1.23650 0.96489 1.03280 0.95420 1.22720 0.99602 1.00286 0.91679 0.86722 1.22183 1.04341 0.90580 0.82365 1.47500 1.15341 1.22420 1.22999 1.23715 0.95244 1.05144 0.96114 1.23681 0.98097 0.96197 1.02882 1.75161 1.08146 1.22767 1.07651 1.78300 1.18917 0.99007 1.10170 1.23406 1.01061 0.99307 0.93793 1.67991 1.16610 1.39992 1.04490 1.22846 0.89125 0.90971 0.91560 0.77358 0.86685 1.17957 1.17459 0.81648 0.74748 0.90475 0.89456 0.87459 0.87831 0.79347 0.79318 0.88918 0.89530 0.81253 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.55 12.85 -35.23 -0.45 0.10 16 2 C -0.05 0.07 2.83 36.01 0.10 0.17 16 3 Si 0.68 -1.44 29.88 -169.99 -5.08 -6.52 16 4 C -0.29 0.16 5.36 -104.35 -0.56 -0.40 16 5 C 0.20 -0.04 9.92 -17.23 -0.17 -0.21 16 6 N -0.56 -0.87 9.13 -13.93 -0.13 -0.99 16 7 C 0.57 0.91 8.42 -322.80 -2.72 -1.80 16 8 N -0.69 0.65 5.50 -55.00 -0.30 0.35 16 9 C 0.14 -0.31 4.25 -67.12 -0.29 -0.60 16 10 H 0.12 -0.09 7.37 -51.93 -0.38 -0.47 16 11 C -0.15 0.39 7.43 -25.92 -0.19 0.20 16 12 C -0.12 0.40 3.84 -89.81 -0.34 0.06 16 13 H 0.11 -0.16 7.91 -51.93 -0.41 -0.57 16 14 C 0.13 -0.46 6.29 -4.04 -0.03 -0.49 16 15 N -0.29 -0.01 3.44 -61.26 -0.21 -0.22 16 16 C -0.05 0.05 11.57 -17.05 -0.20 -0.15 16 17 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 18 N -0.27 -1.32 12.41 30.24 0.38 -0.94 16 19 N -0.08 -0.32 12.76 60.35 0.77 0.45 16 20 C -0.14 0.58 7.39 -25.92 -0.19 0.38 16 21 N -0.57 -1.15 10.46 -13.93 -0.15 -1.30 16 22 C 0.22 0.12 10.99 -17.23 -0.19 -0.07 16 23 H 0.38 -1.75 8.70 45.56 0.40 -1.35 16 24 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 25 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 26 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 27 H 0.17 -0.46 5.06 -52.49 -0.27 -0.72 16 28 H 0.41 -0.95 8.84 -40.82 -0.36 -1.31 16 29 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 31 H 0.11 -0.66 7.77 -51.93 -0.40 -1.07 16 32 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 33 H 0.19 -0.93 8.06 -52.48 -0.42 -1.35 16 34 H 0.19 -0.34 8.06 -52.48 -0.42 -0.76 16 35 H 0.09 -0.52 8.08 -51.93 -0.42 -0.94 16 36 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 37 H 0.17 -0.20 8.06 -52.49 -0.42 -0.63 16 LS Contribution 319.18 15.07 4.81 4.81 Total: 0.00 -9.86 319.18 -9.76 -19.61 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -4.40 Total: -12.16 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -4.99 Total: -3.19 kcal Atomic # 7 Polarization: -3.02 SS G_CDS: 0.36 Total: -2.66 kcal Atomic # 8 Polarization: 0.55 SS G_CDS: -0.45 Total: 0.10 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.08 Total: -6.52 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -9.86 -9.76 -19.61 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14927564_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 183.272 kcal (2) G-P(sol) polarization free energy of solvation -9.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 173.416 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.611 kcal (6) G-S(sol) free energy of system = (1) + (5) 163.661 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds