Wall clock time and date at job start Mon Mar 8 2021 06:38:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38603 * 120.71813 * 244.72021 * 4 2 1 6 6 N 1.32272 * 119.19766 * 179.79387 * 5 4 2 7 7 C 1.32495 * 120.73736 * 0.47267 * 6 5 4 8 8 N 1.38409 * 119.21855 * 179.76096 * 7 6 5 9 9 C 1.46501 * 119.99913 * 0.02562 * 8 7 6 10 10 H 1.09003 * 112.84744 * 336.20413 * 9 8 7 11 11 C 1.53783 * 113.61396 * 107.50754 * 9 8 7 12 12 C 1.53776 * 87.08094 * 139.98331 * 11 9 8 13 13 H 1.08998 * 113.69088 * 89.12726 * 12 11 9 14 14 C 1.52996 * 113.61301 * 220.01905 * 12 11 9 15 15 N 1.46503 * 109.47519 * 272.49939 * 14 12 11 16 16 C 1.35305 * 125.87340 * 124.71212 * 15 14 12 17 17 C 1.35346 * 106.17859 * 179.91076 * 16 15 14 18 18 N 1.33772 * 106.49468 * 0.35057 * 17 16 15 19 19 N 1.28628 * 108.88663 * 359.77562 * 18 17 16 20 20 C 1.53776 * 113.61840 * 205.00491 * 9 8 7 21 21 N 1.32490 * 121.56739 * 359.77420 * 7 6 5 22 22 C 1.32277 * 120.74084 * 359.97438 * 21 7 6 23 23 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 24 24 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 25 25 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 26 26 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 27 27 H 1.08002 * 120.39772 * 359.97438 * 5 4 2 28 28 H 0.97000 * 120.00272 * 180.02562 * 8 7 6 29 29 H 1.08997 * 113.61313 * 254.53386 * 11 9 8 30 30 H 1.09002 * 113.61024 * 25.43186 * 11 9 8 31 31 H 1.09004 * 109.47293 * 32.49718 * 14 12 11 32 32 H 1.08996 * 109.47531 * 152.49784 * 14 12 11 33 33 H 1.08003 * 126.91117 * 0.02562 * 16 15 14 34 34 H 1.08007 * 126.75578 * 180.12988 * 17 16 15 35 35 H 1.09002 * 113.61269 * 334.56944 * 20 9 8 36 36 H 1.08998 * 113.61479 * 105.46932 * 20 9 8 37 37 H 1.08002 * 120.40470 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6469 -0.0263 2.2006 6 7 3.0698 -0.6786 3.2707 7 6 2.8242 -1.9725 3.4160 8 7 3.2858 -2.6250 4.5460 9 6 4.0357 -1.8852 5.5641 10 1 4.5164 -0.9902 5.1688 11 6 3.2409 -1.6396 6.8575 12 6 4.5424 -1.9371 7.6207 13 1 5.1621 -1.0565 7.7897 14 6 4.3334 -2.7686 8.8878 15 7 4.0426 -1.8780 10.0141 16 6 2.9578 -1.9469 10.8198 17 6 3.0916 -0.9442 11.7190 18 7 4.2329 -0.3143 11.4185 19 7 4.7724 -0.8918 10.4036 20 6 4.9743 -2.7695 6.4019 21 7 2.1475 -2.6566 2.5053 22 6 1.6923 -2.0633 1.4143 23 1 -0.3934 0.4418 0.7650 24 1 1.7924 -0.5139 -0.8899 25 1 3.5346 1.7702 0.0322 26 1 1.5616 2.4678 -1.2086 27 1 2.8542 1.0274 2.0853 28 1 3.1128 -3.5721 4.6638 29 1 2.8946 -0.6121 6.9688 30 1 2.4545 -2.3738 7.0327 31 1 3.4974 -3.4523 8.7400 32 1 5.2369 -3.3401 9.1005 33 1 2.1489 -2.6599 10.7589 34 1 2.4093 -0.6985 12.5194 35 1 4.6618 -3.8125 6.4526 36 1 6.0274 -2.6541 6.1453 37 1 1.1416 -2.6263 0.6752 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_14927564_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:38:40 Heat of formation + Delta-G solvation = 162.584518 kcal Electronic energy + Delta-G solvation = -21848.423328 eV Core-core repulsion = 18438.381447 eV Total energy + Delta-G solvation = -3410.041881 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.128 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -44.15221 -42.14282 -40.45229 -38.02729 -36.22575 -34.91836 -34.70456 -32.18412 -31.92798 -29.44561 -26.84556 -26.66498 -25.94629 -24.43477 -23.58102 -23.12898 -22.12893 -20.74742 -19.29721 -18.93956 -18.41927 -17.99864 -17.39791 -16.63749 -16.49337 -16.19066 -16.05503 -15.80247 -15.67709 -15.49734 -14.97182 -14.69614 -14.56877 -14.10781 -13.69831 -13.48477 -13.24214 -13.14363 -12.65558 -12.31167 -12.27793 -12.00830 -11.92256 -11.83818 -11.77087 -11.69356 -11.17618 -10.89523 -10.55906 -10.30753 -10.06293 -9.11344 -5.01088 0.02581 0.10899 0.70628 1.30640 1.51472 1.62512 1.64700 1.83255 1.97379 2.75801 3.13081 3.33830 3.41252 3.50230 3.55530 3.65016 3.68405 3.72109 3.76536 3.82151 4.01904 4.09613 4.21880 4.32291 4.36377 4.40729 4.54832 4.62303 4.67698 4.72910 4.75710 4.84526 4.97859 5.03055 5.12963 5.29180 5.39328 5.72711 5.76770 6.02922 6.39742 6.77197 7.25480 7.55896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.045 4.045 3 Si 0.764 3.236 4 C -0.288 4.288 5 C 0.194 3.806 6 N -0.580 5.580 7 C 0.551 3.449 8 N -0.677 5.677 9 C 0.137 3.863 10 H 0.104 0.896 11 C -0.142 4.142 12 C -0.117 4.117 13 H 0.090 0.910 14 C 0.119 3.881 15 N -0.283 5.283 16 C -0.035 4.035 17 C -0.073 4.073 18 N -0.321 5.321 19 N -0.125 5.125 20 C -0.120 4.120 21 N -0.588 5.588 22 C 0.212 3.788 23 H 0.395 0.605 24 H 0.115 0.885 25 H -0.285 1.285 26 H -0.295 1.295 27 H 0.186 0.814 28 H 0.421 0.579 29 H 0.053 0.947 30 H 0.102 0.898 31 H 0.144 0.856 32 H 0.114 0.886 33 H 0.233 0.767 34 H 0.209 0.791 35 H 0.117 0.883 36 H 0.085 0.915 37 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.398 -4.170 0.071 5.379 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.157 4.157 3 Si 0.670 3.330 4 C -0.296 4.296 5 C 0.027 3.973 6 N -0.302 5.302 7 C 0.194 3.806 8 N -0.313 5.313 9 C 0.032 3.968 10 H 0.122 0.878 11 C -0.181 4.181 12 C -0.137 4.137 13 H 0.108 0.892 14 C 0.000 4.000 15 N -0.078 5.078 16 C -0.186 4.186 17 C -0.231 4.231 18 N -0.187 5.187 19 N -0.105 5.105 20 C -0.159 4.159 21 N -0.310 5.310 22 C 0.045 3.955 23 H 0.244 0.756 24 H 0.132 0.868 25 H -0.212 1.212 26 H -0.223 1.223 27 H 0.203 0.797 28 H 0.260 0.740 29 H 0.072 0.928 30 H 0.121 0.879 31 H 0.161 0.839 32 H 0.132 0.868 33 H 0.250 0.750 34 H 0.226 0.774 35 H 0.135 0.865 36 H 0.104 0.896 37 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges -1.060 -3.494 -0.176 3.655 hybrid contribution -1.148 -0.892 -0.794 1.657 sum -2.208 -4.386 -0.971 5.006 Atomic orbital electron populations 1.86481 1.17158 1.82042 1.50461 1.24762 0.85143 1.09906 0.95881 0.93994 0.77931 0.75439 0.85665 1.21760 1.08575 0.97527 1.01717 1.23158 0.87777 1.00131 0.86259 1.67940 1.27733 1.08598 1.25967 1.19732 0.87383 0.85878 0.87578 1.44232 1.57737 1.12139 1.17229 1.22468 0.92771 0.96350 0.85247 0.87811 1.23603 0.97006 1.02344 0.95154 1.22538 0.98819 0.99836 0.92466 0.89204 1.22562 1.06496 0.90219 0.80733 1.47817 1.15014 1.21621 1.23307 1.24384 0.95256 1.04604 0.94405 1.24219 0.97714 0.96863 1.04255 1.75082 1.10106 1.24615 1.08849 1.78218 1.20424 1.00889 1.10949 1.23348 1.00516 1.00028 0.91959 1.68017 1.17394 1.40492 1.05138 1.23153 0.89158 0.91629 0.91565 0.75558 0.86812 1.21218 1.22296 0.79728 0.73969 0.92764 0.87942 0.83861 0.86758 0.75021 0.77391 0.86468 0.89633 0.80051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.41 12.85 -148.98 -1.91 -0.51 16 2 C -0.05 0.15 2.83 71.24 0.20 0.35 16 3 Si 0.76 -3.11 29.88 68.60 2.05 -1.06 16 4 C -0.29 0.31 5.36 -19.69 -0.11 0.20 16 5 C 0.19 -0.04 9.92 84.71 0.84 0.80 16 6 N -0.58 -2.19 9.13 -197.99 -1.81 -4.00 16 7 C 0.55 2.00 8.42 261.49 2.20 4.20 16 8 N -0.68 1.37 5.50 -327.93 -1.80 -0.43 16 9 C 0.14 -0.57 4.25 45.52 0.19 -0.37 16 10 H 0.10 0.01 7.37 -2.39 -0.02 -0.01 16 11 C -0.14 0.76 7.43 31.12 0.23 1.00 16 12 C -0.12 0.78 3.84 -10.27 -0.04 0.74 16 13 H 0.09 -0.10 7.91 -2.39 -0.02 -0.12 16 14 C 0.12 -1.07 6.29 86.38 0.54 -0.52 16 15 N -0.28 0.12 3.44 -347.74 -1.20 -1.07 16 16 C -0.03 0.12 11.57 83.49 0.97 1.09 16 17 C -0.07 -0.18 12.05 83.73 1.01 0.83 16 18 N -0.32 -3.63 12.41 -58.25 -0.72 -4.35 16 19 N -0.13 -1.13 12.76 37.02 0.47 -0.65 16 20 C -0.12 1.12 7.39 31.12 0.23 1.35 16 21 N -0.59 -2.52 10.46 -197.98 -2.07 -4.59 16 22 C 0.21 0.25 10.99 84.71 0.93 1.18 16 23 H 0.39 -3.93 8.70 -74.06 -0.64 -4.57 16 24 H 0.11 -0.33 7.96 -2.39 -0.02 -0.34 16 25 H -0.29 -0.29 7.11 99.48 0.71 0.41 16 26 H -0.30 -1.07 7.11 99.48 0.71 -0.36 16 27 H 0.19 -1.03 5.06 -2.91 -0.01 -1.05 16 28 H 0.42 -2.27 8.84 -92.71 -0.82 -3.09 16 29 H 0.05 -0.02 8.14 -2.39 -0.02 -0.04 16 30 H 0.10 -0.85 7.90 -2.39 -0.02 -0.87 16 31 H 0.14 -2.30 7.77 -2.38 -0.02 -2.32 16 32 H 0.11 -1.21 8.14 -2.39 -0.02 -1.23 16 33 H 0.23 -3.14 8.06 -2.91 -0.02 -3.16 16 34 H 0.21 -0.76 8.06 -2.91 -0.02 -0.79 16 35 H 0.12 -1.63 8.08 -2.39 -0.02 -1.64 16 36 H 0.08 -0.72 8.14 -2.39 -0.02 -0.74 16 37 H 0.18 -0.44 8.06 -2.91 -0.02 -0.46 16 Total: 0.00 -26.12 319.18 -0.09 -26.22 By element: Atomic # 1 Polarization: -20.08 SS G_CDS: -0.31 Total: -20.38 kcal Atomic # 6 Polarization: 3.64 SS G_CDS: 7.20 Total: 10.84 kcal Atomic # 7 Polarization: -7.97 SS G_CDS: -7.13 Total: -15.10 kcal Atomic # 8 Polarization: 1.41 SS G_CDS: -1.91 Total: -0.51 kcal Atomic # 14 Polarization: -3.11 SS G_CDS: 2.05 Total: -1.06 kcal Total: -26.12 -0.09 -26.22 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14927564_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 188.800 kcal (2) G-P(sol) polarization free energy of solvation -26.121 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 162.679 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.215 kcal (6) G-S(sol) free energy of system = (1) + (5) 162.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds