Wall clock time and date at job start Mon Mar 8 2021 06:38:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86296 * 109.47169 * 2 1 4 4 C 1.50695 * 109.47371 * 239.99529 * 2 1 3 5 5 C 1.37993 * 120.32361 * 119.72311 * 4 2 1 6 6 N 1.32008 * 120.90165 * 180.27984 * 5 4 2 7 7 C 1.32336 * 121.64242 * 359.97438 * 6 5 4 8 8 N 1.39155 * 119.71541 * 179.97438 * 7 6 5 9 9 C 1.46499 * 119.99662 * 0.02562 * 8 7 6 10 10 H 1.09000 * 112.85258 * 25.32702 * 9 8 7 11 11 C 1.53782 * 113.61510 * 156.52821 * 9 8 7 12 12 C 1.53773 * 87.08173 * 139.97545 * 11 9 8 13 13 H 1.09000 * 113.61500 * 89.11549 * 12 11 9 14 14 C 1.53000 * 113.61793 * 219.93413 * 12 11 9 15 15 N 1.46505 * 109.47280 * 185.00251 * 14 12 11 16 16 C 1.35309 * 125.86577 * 124.71755 * 15 14 12 17 17 C 1.35354 * 106.17283 * 179.90448 * 16 15 14 18 18 N 1.33773 * 106.49713 * 0.35103 * 17 16 15 19 19 N 1.28634 * 108.88274 * 359.77287 * 18 17 16 20 20 C 1.53778 * 113.61128 * 254.13683 * 9 8 7 21 21 C 1.39341 * 120.56971 * 359.97438 * 7 6 5 22 22 F 1.35099 * 120.47163 * 180.02562 * 21 7 6 23 23 C 1.38439 * 119.05527 * 0.02562 * 21 7 6 24 24 H 0.96700 * 113.99416 * 59.99798 * 1 2 3 25 25 H 1.09003 * 109.46575 * 120.00031 * 2 1 3 26 26 H 1.48507 * 109.99809 * 59.99998 * 3 2 1 27 27 H 1.48496 * 110.00059 * 181.31290 * 3 2 1 28 28 H 1.07997 * 119.54573 * 0.27875 * 5 4 2 29 29 H 0.96990 * 119.99670 * 180.02562 * 8 7 6 30 30 H 1.08998 * 113.61412 * 254.53091 * 11 9 8 31 31 H 1.09009 * 113.60889 * 25.43238 * 11 9 8 32 32 H 1.08996 * 109.47271 * 305.00631 * 14 12 11 33 33 H 1.09004 * 109.47169 * 65.00239 * 14 12 11 34 34 H 1.08001 * 126.91506 * 0.02562 * 16 15 14 35 35 H 1.07997 * 126.75182 * 180.12917 * 17 16 15 36 36 H 1.09010 * 113.61610 * 334.56387 * 20 9 8 37 37 H 1.08999 * 113.62038 * 105.47236 * 20 9 8 38 38 H 1.08003 * 120.75889 * 179.97438 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7205 -0.0447 -2.1460 6 7 3.1622 -0.6543 -3.2303 7 6 2.8698 -1.9200 -3.4830 8 7 3.3566 -2.5229 -4.6389 9 6 4.1893 -1.7569 -5.5695 10 1 4.7132 -0.9314 -5.0876 11 6 5.0972 -2.6334 -6.4484 12 6 4.7646 -1.6787 -7.6070 13 1 5.4455 -0.8309 -7.6834 14 6 4.5490 -2.3897 -8.9445 15 7 4.3575 -1.3938 -10.0018 16 6 5.0781 -1.3009 -11.1432 17 6 4.5674 -0.2504 -11.8271 18 7 3.5775 0.2462 -11.0768 19 7 3.4786 -0.4535 -10.0019 20 6 3.4582 -1.3526 -6.8605 21 6 2.0787 -2.6542 -2.6017 22 9 1.7819 -3.9463 -2.8614 23 6 1.6013 -2.0407 -1.4562 24 1 -0.3932 0.4417 -0.7651 25 1 1.7923 -0.5139 0.8900 26 1 1.5615 2.4678 1.2086 27 1 3.5346 1.7702 -0.0320 28 1 2.9801 0.9892 -1.9730 29 1 3.1445 -3.4502 -4.8283 30 1 6.1457 -2.6112 -6.1514 31 1 4.7187 -3.6453 -6.5940 32 1 5.4208 -3.0018 -9.1754 33 1 3.6658 -3.0253 -8.8798 34 1 5.8951 -1.9381 -11.4483 35 1 4.8968 0.1170 -12.7877 36 1 2.6309 -2.0136 -7.1192 37 1 3.1856 -0.2979 -6.8960 38 1 0.9855 -2.5837 -0.7545 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14927564_17656566.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:38:51 Heat of formation + Delta-G solvation = 101.886774 kcal Electronic energy + Delta-G solvation = -24131.554956 eV Core-core repulsion = 20314.852959 eV Total energy + Delta-G solvation = -3816.701997 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.123 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -49.88951 -44.13962 -41.52758 -40.46727 -38.02499 -36.24247 -34.88733 -33.20171 -31.92742 -31.45366 -29.49885 -26.95641 -26.62498 -25.46164 -24.01499 -23.50900 -22.94831 -22.12170 -21.04177 -19.29094 -18.85180 -18.49514 -18.25770 -17.58402 -17.28051 -16.97405 -16.57937 -16.23090 -16.07794 -15.90038 -15.83103 -15.49470 -15.38242 -14.92328 -14.40934 -14.32033 -14.04822 -13.92096 -13.66500 -13.53053 -13.33044 -12.64464 -12.58811 -12.37819 -12.23703 -12.06985 -11.88037 -11.55183 -11.26118 -11.00849 -10.69190 -10.67154 -10.47215 -10.29825 -8.79326 -5.09082 -0.08522 0.10521 0.67377 1.21693 1.33924 1.56598 1.71210 1.92265 1.92574 2.53254 3.02148 3.05710 3.17624 3.28413 3.37876 3.42497 3.49442 3.57192 3.64175 3.82395 3.82825 3.87776 3.96653 4.03787 4.14418 4.32153 4.39527 4.43046 4.47107 4.51671 4.56376 4.67142 4.73261 4.82099 4.95909 4.99784 5.07764 5.25182 5.40350 5.61699 5.91017 6.13603 6.51369 6.92429 7.62224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.686 3.314 4 C -0.209 4.209 5 C 0.148 3.852 6 N -0.511 5.511 7 C 0.390 3.610 8 N -0.707 5.707 9 C 0.137 3.863 10 H 0.121 0.879 11 C -0.138 4.138 12 C -0.122 4.122 13 H 0.103 0.897 14 C 0.126 3.874 15 N -0.291 5.291 16 C -0.054 4.054 17 C -0.051 4.051 18 N -0.273 5.273 19 N -0.078 5.078 20 C -0.139 4.139 21 C -0.020 4.020 22 F -0.134 7.134 23 C -0.038 4.038 24 H 0.380 0.620 25 H 0.116 0.884 26 H -0.251 1.251 27 H -0.254 1.254 28 H 0.163 0.837 29 H 0.412 0.588 30 H 0.083 0.917 31 H 0.091 0.909 32 H 0.109 0.891 33 H 0.101 0.899 34 H 0.190 0.810 35 H 0.190 0.810 36 H 0.087 0.913 37 H 0.082 0.918 38 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.601 -2.361 -1.505 4.561 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.166 4.166 3 Si 0.587 3.413 4 C -0.214 4.214 5 C -0.009 4.009 6 N -0.227 5.227 7 C 0.152 3.848 8 N -0.339 5.339 9 C 0.032 3.968 10 H 0.139 0.861 11 C -0.177 4.177 12 C -0.141 4.141 13 H 0.121 0.879 14 C 0.005 3.995 15 N -0.085 5.085 16 C -0.204 4.204 17 C -0.209 4.209 18 N -0.139 5.139 19 N -0.058 5.058 20 C -0.178 4.178 21 C -0.047 4.047 22 F -0.113 7.113 23 C -0.064 4.064 24 H 0.228 0.772 25 H 0.133 0.867 26 H -0.176 1.176 27 H -0.179 1.179 28 H 0.180 0.820 29 H 0.250 0.750 30 H 0.102 0.898 31 H 0.110 0.890 32 H 0.127 0.873 33 H 0.119 0.881 34 H 0.207 0.793 35 H 0.207 0.793 36 H 0.105 0.895 37 H 0.100 0.900 38 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.634 -0.922 -0.457 3.777 hybrid contribution 0.463 -2.417 -0.050 2.461 sum 4.097 -3.339 -0.506 5.309 Atomic orbital electron populations 1.86511 1.17049 1.81666 1.49346 1.24855 0.85258 1.09904 0.96632 0.94788 0.81048 0.77645 0.87783 1.20944 1.04788 0.95202 1.00495 1.22349 0.91806 0.99045 0.87750 1.67276 1.26244 1.07443 1.21779 1.18444 0.90149 0.89112 0.87064 1.44558 1.54709 1.14417 1.20192 1.22461 0.91532 0.95168 0.87634 0.86126 1.23401 1.01179 0.98681 0.94432 1.22666 1.00337 0.99678 0.91449 0.87851 1.22186 1.04532 0.88275 0.84533 1.47533 1.22631 1.22650 1.15653 1.23744 1.03034 1.04236 0.89415 1.23685 0.97345 0.97015 1.02811 1.75175 1.17417 1.21654 0.99665 1.78349 1.11655 0.98302 1.17499 1.23585 0.96120 1.03599 0.94504 1.18004 1.06996 0.80893 0.98779 1.91490 1.92206 1.33589 1.93999 1.21281 0.96127 0.94292 0.94688 0.77247 0.86715 1.17576 1.17872 0.82037 0.75050 0.89814 0.89016 0.87285 0.88066 0.79295 0.79331 0.89457 0.89964 0.83284 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.27 12.78 -35.23 -0.45 -0.18 16 2 C -0.05 0.06 2.83 36.00 0.10 0.16 16 3 Si 0.69 -1.30 29.82 -169.99 -5.07 -6.37 16 4 C -0.21 0.08 5.40 -104.47 -0.56 -0.49 16 5 C 0.15 -0.03 9.84 -17.57 -0.17 -0.20 16 6 N -0.51 -0.68 9.15 -12.36 -0.11 -0.80 16 7 C 0.39 0.44 7.49 -154.85 -1.16 -0.72 16 8 N -0.71 0.63 5.51 -53.06 -0.29 0.34 16 9 C 0.14 -0.26 4.24 -67.12 -0.28 -0.54 16 10 H 0.12 -0.08 7.45 -51.93 -0.39 -0.46 16 11 C -0.14 0.58 7.39 -25.92 -0.19 0.39 16 12 C -0.12 0.39 3.76 -89.72 -0.34 0.05 16 13 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 14 C 0.13 -0.45 6.30 -4.04 -0.03 -0.48 16 15 N -0.29 -0.02 3.44 -61.26 -0.21 -0.23 16 16 C -0.05 0.06 11.57 -17.05 -0.20 -0.14 16 17 C -0.05 -0.06 12.05 -17.73 -0.21 -0.27 16 18 N -0.27 -1.32 12.41 30.24 0.38 -0.95 16 19 N -0.08 -0.30 12.93 60.35 0.78 0.49 16 20 C -0.14 0.21 7.45 -25.83 -0.19 0.02 16 21 C -0.02 -0.03 7.35 -39.10 -0.29 -0.31 16 22 F -0.13 -0.25 16.65 2.25 0.04 -0.21 16 23 C -0.04 -0.02 9.75 -39.26 -0.38 -0.40 16 24 H 0.38 -1.59 8.70 45.56 0.40 -1.20 16 25 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 26 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 27 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 28 H 0.16 -0.38 4.88 -52.49 -0.26 -0.63 16 29 H 0.41 -0.88 8.18 -40.82 -0.33 -1.21 16 30 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 31 H 0.09 -0.49 8.07 -51.92 -0.42 -0.91 16 32 H 0.11 -0.68 8.07 -51.93 -0.42 -1.10 16 33 H 0.10 -0.42 7.86 -51.93 -0.41 -0.83 16 34 H 0.19 -0.95 8.06 -52.49 -0.42 -1.38 16 35 H 0.19 -0.34 8.06 -52.49 -0.42 -0.76 16 36 H 0.09 -0.12 7.91 -51.92 -0.41 -0.53 16 37 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.15 -0.04 8.06 -52.48 -0.42 -0.46 16 LS Contribution 329.99 15.07 4.97 4.97 Total: 0.00 -9.04 329.99 -8.26 -17.30 By element: Atomic # 1 Polarization: -7.03 SS G_CDS: -4.38 Total: -11.41 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -3.91 Total: -2.94 kcal Atomic # 7 Polarization: -1.69 SS G_CDS: 0.54 Total: -1.15 kcal Atomic # 8 Polarization: 0.27 SS G_CDS: -0.45 Total: -0.18 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.04 Total: -0.21 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.07 Total: -6.37 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -9.04 -8.26 -17.30 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14927564_17656566.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.184 kcal (2) G-P(sol) polarization free energy of solvation -9.037 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.147 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.260 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.297 kcal (6) G-S(sol) free energy of system = (1) + (5) 101.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds