Wall clock time and date at job start Mon Mar 8 2021 08:35:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.47128 * 2 1 4 4 C 1.50705 * 109.47142 * 120.00254 * 2 1 3 5 5 C 1.38840 * 120.33903 * 64.99756 * 4 2 1 6 6 C 1.38331 * 118.50490 * 180.02562 * 5 4 2 7 7 C 1.39097 * 119.10460 * 0.02562 * 6 5 4 8 8 N 1.39000 * 119.71080 * 179.97438 * 7 6 5 9 9 C 1.46506 * 119.99894 * 359.97438 * 8 7 6 10 10 C 1.52999 * 109.47139 * 180.02562 * 9 8 7 11 11 H 1.08998 * 109.46998 * 305.00362 * 10 9 8 12 12 C 1.53005 * 109.46804 * 65.00240 * 10 9 8 13 13 C 1.52999 * 109.46768 * 179.97438 * 12 10 9 14 14 C 1.52999 * 109.47498 * 300.00318 * 13 12 10 15 15 H 1.08998 * 109.47158 * 299.99727 * 14 13 12 16 16 C 1.52999 * 109.47157 * 179.97438 * 14 13 12 17 17 O 1.42903 * 109.47256 * 65.00201 * 16 14 13 18 18 C 1.52996 * 109.47324 * 59.99888 * 14 13 12 19 19 C 1.52999 * 109.46961 * 300.00068 * 18 14 13 20 20 N 1.32428 * 120.58394 * 0.25346 * 7 6 5 21 21 C 1.31942 * 121.62566 * 359.47812 * 20 7 6 22 22 H 0.96701 * 113.99330 * 300.00021 * 1 2 3 23 23 H 1.09000 * 109.47111 * 240.00219 * 2 1 3 24 24 H 1.48507 * 109.99867 * 178.67913 * 3 2 1 25 25 H 1.48499 * 110.00086 * 299.99943 * 3 2 1 26 26 H 1.08002 * 120.74207 * 0.04241 * 5 4 2 27 27 H 1.07999 * 120.45184 * 180.02562 * 6 5 4 28 28 H 0.97001 * 120.00335 * 180.02562 * 8 7 6 29 29 H 1.09004 * 109.46865 * 60.00189 * 9 8 7 30 30 H 1.09001 * 109.47345 * 300.00499 * 9 8 7 31 31 H 1.08999 * 109.47085 * 299.99797 * 12 10 9 32 32 H 1.08998 * 109.47244 * 60.00272 * 12 10 9 33 33 H 1.08996 * 109.47277 * 179.97438 * 13 12 10 34 34 H 1.09001 * 109.47195 * 60.00374 * 13 12 10 35 35 H 1.08997 * 109.47286 * 304.99761 * 16 14 13 36 36 H 1.09008 * 109.47201 * 184.99542 * 16 14 13 37 37 H 0.96700 * 114.00311 * 180.02562 * 17 16 14 38 38 H 1.08998 * 109.47134 * 59.99825 * 18 14 13 39 39 H 1.08999 * 109.47038 * 180.02562 * 18 14 13 40 40 H 1.09004 * 109.47113 * 179.97438 * 19 18 14 41 41 H 1.08993 * 109.47646 * 300.00120 * 19 18 14 42 42 H 1.07996 * 119.57332 * 180.24410 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 1.6877 -2.0660 1.4062 6 6 2.1657 -2.6798 2.5500 7 6 2.8699 -1.9226 3.4803 8 7 3.3555 -2.5264 4.6343 9 6 3.1242 -3.9543 4.8668 10 6 3.7565 -4.3632 6.1987 11 1 4.8111 -4.0878 6.1999 12 6 3.0405 -3.6454 7.3446 13 6 3.6724 -4.0547 8.6766 14 6 3.5397 -5.5678 8.8604 15 1 2.4850 -5.8429 8.8589 16 6 4.1721 -5.9772 10.1921 17 8 3.4314 -5.3992 11.2689 18 6 4.2555 -6.2856 7.7145 19 6 3.6237 -5.8763 6.3826 20 7 3.0771 -0.6302 3.2790 21 6 2.6373 -0.0196 2.1952 22 1 -0.3932 0.4417 0.7651 23 1 1.7924 -0.5138 -0.8900 24 1 3.5347 1.7702 0.0322 25 1 1.5615 2.4679 -1.2085 26 1 1.1374 -2.6285 0.6664 27 1 1.9945 -3.7328 2.7185 28 1 3.8468 -2.0023 5.2861 29 1 3.5735 -4.5314 4.0585 30 1 2.0521 -4.1482 4.8992 31 1 3.1348 -2.5674 7.2134 32 1 1.9859 -3.9208 7.3434 33 1 3.1627 -3.5431 9.4930 34 1 4.7271 -3.7797 8.6782 35 1 5.2025 -5.6236 10.2289 36 1 4.1572 -7.0634 10.2828 37 1 3.7769 -5.6168 12.1454 38 1 5.3102 -6.0105 7.7160 39 1 4.1606 -7.3635 7.8453 40 1 4.1340 -6.3873 5.5661 41 1 2.5690 -6.1513 6.3810 42 1 2.8285 1.0350 2.0629 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14939084_13915762.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:35:51 Heat of formation + Delta-G solvation = -59.987228 kcal Electronic energy + Delta-G solvation = -21514.548306 eV Core-core repulsion = 18267.017244 eV Total energy + Delta-G solvation = -3247.531062 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.162 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.37580 -40.31398 -38.22505 -37.61718 -36.35517 -33.62333 -33.07659 -31.85587 -31.11557 -28.20789 -26.13162 -25.08774 -24.27223 -23.74440 -22.40261 -21.63201 -20.89686 -18.70846 -18.43783 -18.24412 -17.47131 -16.64339 -16.45577 -16.13833 -16.00482 -15.76062 -15.60890 -15.36950 -15.05877 -14.80460 -14.63650 -14.18699 -14.07287 -13.98659 -13.55977 -13.34386 -13.21654 -12.95859 -12.59234 -12.33302 -12.17700 -12.06195 -11.95495 -11.52179 -11.26852 -11.23310 -11.07700 -10.86436 -10.66937 -10.36794 -10.33830 -8.66843 -5.00311 0.29583 0.46910 1.34310 1.66856 2.01414 2.11048 2.91112 3.14449 3.49048 3.52926 3.60482 3.63109 3.65673 3.82412 3.93906 4.04572 4.06851 4.15014 4.17599 4.30787 4.34365 4.37346 4.37925 4.46493 4.52609 4.55265 4.57311 4.62759 4.66084 4.77906 4.82511 4.94657 5.02310 5.05255 5.08758 5.13379 5.20804 5.33439 5.36112 5.43407 5.55581 6.02242 6.55908 6.62585 6.64247 7.20045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.680 3.320 4 C -0.238 4.238 5 C -0.005 4.005 6 C -0.239 4.239 7 C 0.408 3.592 8 N -0.722 5.722 9 C 0.131 3.869 10 C -0.098 4.098 11 H 0.079 0.921 12 C -0.115 4.115 13 C -0.110 4.110 14 C -0.088 4.088 15 H 0.078 0.922 16 C 0.078 3.922 17 O -0.574 6.574 18 C -0.113 4.113 19 C -0.109 4.109 20 N -0.541 5.541 21 C 0.158 3.842 22 H 0.378 0.622 23 H 0.111 0.889 24 H -0.256 1.256 25 H -0.254 1.254 26 H 0.135 0.865 27 H 0.132 0.868 28 H 0.406 0.594 29 H 0.064 0.936 30 H 0.065 0.935 31 H 0.064 0.936 32 H 0.065 0.935 33 H 0.071 0.929 34 H 0.060 0.940 35 H 0.045 0.955 36 H 0.045 0.955 37 H 0.380 0.620 38 H 0.065 0.935 39 H 0.067 0.933 40 H 0.068 0.932 41 H 0.068 0.932 42 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.796 -2.437 2.986 3.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.582 3.418 4 C -0.243 4.243 5 C -0.031 4.031 6 C -0.264 4.264 7 C 0.172 3.828 8 N -0.354 5.354 9 C 0.006 3.994 10 C -0.117 4.117 11 H 0.097 0.903 12 C -0.152 4.152 13 C -0.148 4.148 14 C -0.107 4.107 15 H 0.096 0.904 16 C 0.000 4.000 17 O -0.379 6.379 18 C -0.150 4.150 19 C -0.148 4.148 20 N -0.257 5.257 21 C 0.000 4.000 22 H 0.226 0.774 23 H 0.129 0.871 24 H -0.181 1.181 25 H -0.178 1.178 26 H 0.153 0.847 27 H 0.150 0.850 28 H 0.242 0.758 29 H 0.083 0.917 30 H 0.084 0.916 31 H 0.083 0.917 32 H 0.084 0.916 33 H 0.090 0.910 34 H 0.079 0.921 35 H 0.063 0.937 36 H 0.063 0.937 37 H 0.227 0.773 38 H 0.084 0.916 39 H 0.086 0.914 40 H 0.087 0.913 41 H 0.087 0.913 42 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.439 -1.670 2.161 3.087 hybrid contribution 0.254 -1.206 -0.049 1.233 sum 1.693 -2.876 2.112 3.949 Atomic orbital electron populations 1.86492 1.17372 1.81694 1.49245 1.24778 0.84987 1.09662 0.96947 0.94897 0.81185 0.78181 0.87518 1.20977 1.07116 0.96102 1.00115 1.21184 0.93094 0.93426 0.95380 1.21443 1.06755 1.01362 0.96840 1.18385 0.89228 0.88409 0.86764 1.44539 1.60697 1.09458 1.20749 1.21499 1.00553 0.80147 0.97189 1.21407 1.00617 0.96239 0.93443 0.90281 1.21615 0.99914 0.99857 0.93861 1.21516 1.01019 0.94994 0.97266 1.21170 1.00852 0.96135 0.92515 0.90377 1.22246 0.94294 0.96342 0.87099 1.86474 1.57736 1.76394 1.17305 1.21499 0.99829 1.00014 0.93684 1.21471 1.01737 0.94102 0.97441 1.67132 1.25862 1.09079 1.23663 1.22180 0.91467 0.98681 0.87665 0.77447 0.87146 1.18098 1.17838 0.84743 0.84983 0.75816 0.91746 0.91646 0.91734 0.91605 0.91017 0.92141 0.93680 0.93680 0.77285 0.91601 0.91440 0.91295 0.91334 0.82880 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.33 12.84 -35.23 -0.45 -0.78 16 2 C -0.05 -0.01 2.82 36.01 0.10 0.09 16 3 Si 0.68 -0.41 29.83 -169.99 -5.07 -5.48 16 4 C -0.24 -0.24 5.36 -104.46 -0.56 -0.80 16 5 C -0.01 -0.01 9.83 -39.32 -0.39 -0.39 16 6 C -0.24 -0.27 9.33 -39.23 -0.37 -0.63 16 7 C 0.41 0.85 7.65 -155.01 -1.19 -0.33 16 8 N -0.72 -0.05 5.46 -60.42 -0.33 -0.38 16 9 C 0.13 -0.24 4.28 -4.04 -0.02 -0.25 16 10 C -0.10 0.23 2.23 -90.62 -0.20 0.03 16 11 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 12 C -0.11 0.16 5.08 -26.73 -0.14 0.03 16 13 C -0.11 0.07 5.10 -26.73 -0.14 -0.06 16 14 C -0.09 0.08 2.43 -90.62 -0.22 -0.14 16 15 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 16 C 0.08 -0.07 6.43 37.16 0.24 0.17 16 17 O -0.57 -0.26 13.20 -35.23 -0.46 -0.73 16 18 C -0.11 0.25 5.20 -26.73 -0.14 0.11 16 19 C -0.11 0.29 5.20 -26.73 -0.14 0.15 16 20 N -0.54 -1.69 10.39 -12.44 -0.13 -1.82 16 21 C 0.16 0.24 9.84 -17.57 -0.17 0.07 16 22 H 0.38 -1.16 8.70 45.56 0.40 -0.77 16 23 H 0.11 0.06 7.96 -51.93 -0.41 -0.36 16 24 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 25 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 26 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 27 H 0.13 -0.08 6.71 -52.49 -0.35 -0.43 16 28 H 0.41 -0.07 7.78 -40.82 -0.32 -0.39 16 29 H 0.06 -0.13 7.93 -51.93 -0.41 -0.54 16 30 H 0.07 -0.12 7.93 -51.93 -0.41 -0.53 16 31 H 0.06 -0.07 7.18 -51.93 -0.37 -0.44 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.07 0.07 7.82 -51.93 -0.41 -0.34 16 34 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 35 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.04 -0.07 8.14 -51.92 -0.42 -0.50 16 37 H 0.38 -1.35 9.12 45.56 0.42 -0.94 16 38 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 40 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 41 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 42 H 0.15 -0.11 4.91 -52.49 -0.26 -0.36 16 LS Contribution 332.21 15.07 5.01 5.01 Total: 0.00 -6.56 332.21 -10.74 -17.30 By element: Atomic # 1 Polarization: -5.16 SS G_CDS: -5.98 Total: -11.14 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: -3.32 Total: -1.98 kcal Atomic # 7 Polarization: -1.74 SS G_CDS: -0.46 Total: -2.20 kcal Atomic # 8 Polarization: -0.59 SS G_CDS: -0.92 Total: -1.51 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.07 Total: -5.48 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -6.56 -10.74 -17.30 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14939084_13915762.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.688 kcal (2) G-P(sol) polarization free energy of solvation -6.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.299 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds