Wall clock time and date at job start Mon Mar 8 2021 08:54:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 O 1.42900 * 109.47385 * 340.16079 * 3 2 1 5 5 C 1.42902 * 114.00263 * 180.02562 * 4 3 2 6 6 H 1.08998 * 109.47186 * 29.99893 * 5 4 3 7 7 C 1.52999 * 109.47056 * 150.00181 * 5 4 3 8 8 C 1.53001 * 109.46817 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.47162 * 299.99587 * 8 7 5 10 10 H 1.08998 * 109.47104 * 300.00321 * 9 8 7 11 11 N 1.46496 * 109.47110 * 180.02562 * 9 8 7 12 12 C 1.38411 * 119.99929 * 155.00389 * 11 9 8 13 13 N 1.32487 * 119.21808 * 179.97438 * 12 11 9 14 14 C 1.32273 * 120.74457 * 179.97438 * 13 12 11 15 15 C 1.38605 * 119.19419 * 0.02562 * 14 13 12 16 16 C 1.50699 * 120.72226 * 179.72488 * 15 14 13 17 17 O 1.42898 * 109.47380 * 300.00086 * 16 15 14 18 18 Si 1.86295 * 109.47299 * 179.97438 * 16 15 14 19 19 C 1.38600 * 118.55909 * 359.97438 * 15 14 13 20 20 N 1.32277 * 119.19790 * 0.02562 * 19 15 14 21 21 C 1.53002 * 109.47114 * 60.00150 * 9 8 7 22 22 C 1.53001 * 109.46984 * 299.99959 * 21 9 8 23 23 H 4.38446 * 5.44380 * 179.97438 * 4 1 2 24 24 H 1.09006 * 109.47082 * 220.15957 * 3 2 1 25 25 H 1.08994 * 109.47178 * 100.15968 * 3 2 1 26 26 H 1.08998 * 109.47358 * 59.99817 * 7 5 4 27 27 H 1.09006 * 109.47072 * 299.99610 * 7 5 4 28 28 H 1.09002 * 109.46829 * 179.97438 * 8 7 5 29 29 H 1.08998 * 109.47374 * 59.99743 * 8 7 5 30 30 H 0.97001 * 120.00401 * 334.99381 * 11 9 8 31 31 H 1.08000 * 120.40821 * 179.97438 * 14 13 12 32 32 H 1.09005 * 109.47181 * 60.00088 * 16 15 14 33 33 H 0.96702 * 114.00298 * 179.97438 * 17 16 15 34 34 H 1.48503 * 110.00217 * 298.68155 * 18 16 15 35 35 H 1.48497 * 110.00238 * 60.00278 * 18 16 15 36 36 H 1.08000 * 120.40289 * 179.97438 * 19 15 14 37 37 H 1.08998 * 109.46995 * 60.00105 * 21 9 8 38 38 H 1.08999 * 109.47535 * 180.02562 * 21 9 8 39 39 H 1.08998 * 109.47374 * 299.99914 * 22 21 9 40 40 H 1.09004 * 109.47267 * 179.97438 * 22 21 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1229 -1.2664 0.4572 5 6 4.5475 -1.3717 0.4961 6 1 4.9794 -0.3896 0.6883 7 6 4.9574 -2.3362 1.6108 8 6 6.4827 -2.4484 1.6528 9 6 6.9925 -2.9751 0.3098 10 1 6.5610 -3.9573 0.1173 11 7 8.4529 -3.0831 0.3502 12 6 9.1040 -3.9775 -0.4817 13 7 10.4252 -4.0621 -0.4327 14 6 11.0781 -4.9067 -1.2137 15 6 10.3631 -5.7077 -2.0902 16 6 11.0723 -6.6775 -2.9999 17 8 11.9681 -5.9623 -3.8532 18 14 9.8194 -7.5867 -4.0362 19 6 8.9821 -5.5936 -2.1156 20 7 8.3911 -4.7287 -1.3080 21 6 6.5826 -2.0106 -0.8050 22 6 5.0573 -1.8984 -0.8470 23 1 -1.0498 -0.0003 0.0003 24 1 3.0090 0.7863 0.6628 25 1 3.0092 0.1821 -1.0115 26 1 4.5256 -3.3184 1.4186 27 1 4.5946 -1.9608 2.5677 28 1 6.7748 -3.1352 2.4473 29 1 6.9142 -1.4662 1.8453 30 1 8.9637 -2.5277 0.9598 31 1 12.1553 -4.9709 -1.1695 32 1 11.6352 -7.3930 -2.4002 33 1 12.4601 -6.5248 -4.4669 34 1 8.9019 -8.3602 -3.1614 35 1 9.0449 -6.6229 -4.8585 36 1 8.3956 -6.2030 -2.7873 37 1 7.0140 -1.0284 -0.6125 38 1 6.9453 -2.3860 -1.7619 39 1 4.6258 -2.8807 -1.0395 40 1 4.7652 -1.2110 -1.6409 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14940686_12175864.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:54:33 Heat of formation + Delta-G solvation = 38.820891 kcal Electronic energy + Delta-G solvation = -22479.792447 eV Core-core repulsion = 19070.205454 eV Total energy + Delta-G solvation = -3409.586993 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.142 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.09383 -40.49972 -38.57125 -37.81123 -35.73829 -34.69324 -34.03669 -32.56089 -31.94917 -29.73619 -27.76791 -26.37956 -25.81933 -23.87896 -23.38371 -22.55339 -21.24561 -19.55149 -19.18191 -18.74160 -18.32582 -17.90046 -16.95318 -16.58931 -16.46800 -16.14530 -16.04286 -15.76301 -15.30133 -15.12974 -14.89785 -14.73191 -14.33646 -14.02459 -13.87511 -13.45076 -13.32241 -13.17129 -12.71782 -12.52418 -12.24889 -12.22682 -11.87355 -11.83753 -11.78087 -11.74031 -11.41168 -11.28642 -11.12972 -10.58747 -10.41364 -9.94909 -9.08521 -5.06618 0.06375 0.17721 1.21019 1.53290 1.57193 1.79726 1.87061 1.88770 2.80433 2.85160 3.10360 3.35031 3.47029 3.53274 3.59166 3.64915 3.72179 3.88020 3.95957 4.05118 4.07754 4.13015 4.16496 4.24929 4.31893 4.36086 4.40747 4.45983 4.57336 4.70495 4.77883 4.85714 4.94676 4.98866 5.03892 5.08249 5.13186 5.22989 5.33773 5.78728 6.01126 6.14619 6.40908 6.57420 6.63338 7.30487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.066 0.934 7 C -0.111 4.111 8 C -0.124 4.124 9 C 0.158 3.842 10 H 0.095 0.905 11 N -0.692 5.692 12 C 0.568 3.432 13 N -0.568 5.568 14 C 0.227 3.773 15 C -0.249 4.249 16 C -0.050 4.050 17 O -0.548 6.548 18 Si 0.680 3.320 19 C 0.193 3.807 20 N -0.560 5.560 21 C -0.126 4.126 22 C -0.138 4.138 23 H 0.223 0.777 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.077 0.923 27 H 0.078 0.922 28 H 0.078 0.922 29 H 0.072 0.928 30 H 0.414 0.586 31 H 0.172 0.828 32 H 0.076 0.924 33 H 0.384 0.616 34 H -0.252 1.252 35 H -0.249 1.249 36 H 0.157 0.843 37 H 0.065 0.935 38 H 0.072 0.928 39 H 0.076 0.924 40 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.179 -1.737 -1.218 3.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.199 4.199 3 C 0.097 3.903 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.084 0.916 7 C -0.149 4.149 8 C -0.162 4.162 9 C 0.053 3.947 10 H 0.113 0.887 11 N -0.327 5.327 12 C 0.212 3.788 13 N -0.289 5.289 14 C 0.059 3.941 15 C -0.257 4.257 16 C -0.162 4.162 17 O -0.354 6.354 18 Si 0.581 3.419 19 C 0.026 3.974 20 N -0.282 5.282 21 C -0.165 4.165 22 C -0.177 4.177 23 H 0.239 0.761 24 H 0.092 0.908 25 H 0.092 0.908 26 H 0.096 0.904 27 H 0.097 0.903 28 H 0.097 0.903 29 H 0.091 0.909 30 H 0.252 0.748 31 H 0.189 0.811 32 H 0.094 0.906 33 H 0.232 0.768 34 H -0.177 1.177 35 H -0.173 1.173 36 H 0.174 0.826 37 H 0.083 0.917 38 H 0.090 0.910 39 H 0.095 0.905 40 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 0.273 -0.798 -0.383 0.926 hybrid contribution 0.764 0.135 -0.047 0.778 sum 1.037 -0.663 -0.430 1.304 Atomic orbital electron populations 1.25045 0.95973 0.97531 1.00071 1.22510 0.93892 1.02323 1.01173 1.19111 0.84832 0.86630 0.99694 1.87994 1.21258 1.33221 1.87006 1.22201 0.80321 0.99085 0.95222 0.91640 1.21496 0.94310 1.00553 0.98537 1.21782 0.95511 1.02300 0.96647 1.21059 0.78036 1.00666 0.94949 0.88705 1.44250 1.06661 1.40735 1.41081 1.19368 0.85204 0.87105 0.87165 1.67996 1.08014 1.24985 1.27926 1.22817 1.00444 0.85348 0.85509 1.20727 0.95322 1.05573 1.04090 1.24293 0.99851 0.96371 0.95696 1.86483 1.58638 1.37404 1.52916 0.95088 0.79972 0.83078 0.83770 1.22583 0.91418 0.91171 0.92251 1.67909 1.40270 1.10136 1.09855 1.21902 0.95223 0.99694 0.99704 1.22002 0.95179 1.03000 0.97475 0.76068 0.90769 0.90835 0.90437 0.90346 0.90302 0.90930 0.74807 0.81055 0.90592 0.76828 1.17714 1.17323 0.82646 0.91655 0.90952 0.90494 0.91309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.27 19.25 29.55 0.57 0.30 16 2 C -0.20 -0.55 13.73 -37.13 -0.51 -1.06 16 3 C 0.17 0.15 6.22 34.37 0.21 0.37 16 4 O -0.38 -0.84 9.95 -35.23 -0.35 -1.19 16 5 C 0.09 -0.01 2.61 -26.73 -0.07 -0.08 16 6 H 0.07 -0.09 7.79 -51.93 -0.40 -0.50 16 7 C -0.11 0.08 5.57 -26.73 -0.15 -0.07 16 8 C -0.12 0.20 5.39 -26.73 -0.14 0.05 16 9 C 0.16 0.03 2.45 -67.93 -0.17 -0.14 16 10 H 0.09 0.16 7.50 -51.93 -0.39 -0.23 16 11 N -0.69 -0.87 5.22 -55.80 -0.29 -1.16 16 12 C 0.57 2.17 8.40 -322.81 -2.71 -0.54 16 13 N -0.57 -2.26 10.46 -13.93 -0.15 -2.40 16 14 C 0.23 0.57 10.92 -17.23 -0.19 0.38 16 15 C -0.25 -0.52 5.43 -104.35 -0.57 -1.09 16 16 C -0.05 0.05 2.84 36.01 0.10 0.15 16 17 O -0.55 0.43 12.76 -35.23 -0.45 -0.02 16 18 Si 0.68 -1.23 29.87 -169.99 -5.08 -6.31 16 19 C 0.19 0.61 9.92 -17.23 -0.17 0.44 16 20 N -0.56 -2.37 9.20 -13.93 -0.13 -2.49 16 21 C -0.13 -0.02 5.51 -26.73 -0.15 -0.17 16 22 C -0.14 0.00 5.54 -26.73 -0.15 -0.15 16 23 H 0.22 -0.42 7.80 -54.10 -0.42 -0.84 16 24 H 0.07 -0.06 8.08 -51.93 -0.42 -0.48 16 25 H 0.07 -0.04 7.87 -51.93 -0.41 -0.45 16 26 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 27 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.41 -0.06 8.72 -40.82 -0.36 -0.41 16 31 H 0.17 0.02 8.06 -52.49 -0.42 -0.40 16 32 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 33 H 0.38 -2.21 8.74 45.56 0.40 -1.81 16 34 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 35 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 36 H 0.16 0.29 5.04 -52.49 -0.26 0.03 16 37 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 39 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 40 H 0.07 -0.01 7.87 -51.93 -0.41 -0.42 16 LS Contribution 337.90 15.07 5.09 5.09 Total: 0.00 -7.98 337.90 -11.11 -19.08 By element: Atomic # 1 Polarization: -3.31 SS G_CDS: -5.67 Total: -8.98 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: -4.09 Total: -1.62 kcal Atomic # 7 Polarization: -5.49 SS G_CDS: -0.57 Total: -6.05 kcal Atomic # 8 Polarization: -0.42 SS G_CDS: -0.80 Total: -1.22 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.08 Total: -6.31 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -7.98 -11.11 -19.08 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14940686_12175864.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.904 kcal (2) G-P(sol) polarization free energy of solvation -7.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.107 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.083 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.821 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds