Wall clock time and date at job start Mon Mar 8 2021 08:54:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 O 1.42902 * 109.47150 * 35.17220 * 3 2 1 5 5 C 1.42895 * 114.00204 * 179.97438 * 4 3 2 6 6 H 1.09002 * 109.47333 * 30.00115 * 5 4 3 7 7 C 1.53002 * 109.47308 * 150.00301 * 5 4 3 8 8 C 1.53000 * 109.47233 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47060 * 299.99657 * 8 7 5 10 10 H 1.09002 * 109.47153 * 300.00319 * 9 8 7 11 11 N 1.46500 * 109.47473 * 180.02562 * 9 8 7 12 12 C 1.39000 * 120.00031 * 154.99837 * 11 9 8 13 13 N 1.32398 * 119.70438 * 180.02562 * 12 11 9 14 14 C 1.31977 * 121.62315 * 179.97438 * 13 12 11 15 15 C 1.38021 * 120.85337 * 359.97438 * 14 13 12 16 16 C 1.50704 * 120.33141 * 180.02562 * 15 14 13 17 17 O 1.42898 * 109.46941 * 244.99903 * 16 15 14 18 18 Si 1.86296 * 109.47170 * 5.00423 * 16 15 14 19 19 C 1.38879 * 119.33244 * 0.02562 * 15 14 13 20 20 C 1.38299 * 118.50559 * 359.72945 * 19 15 14 21 21 C 1.52999 * 109.47317 * 59.99960 * 9 8 7 22 22 C 1.52997 * 109.47503 * 270.00275 * 5 4 3 23 23 H 4.38447 * 5.44425 * 180.02562 * 4 1 2 24 24 H 1.08993 * 109.47264 * 275.17386 * 3 2 1 25 25 H 1.09003 * 109.47375 * 155.16921 * 3 2 1 26 26 H 1.08992 * 109.47063 * 60.00217 * 7 5 4 27 27 H 1.09004 * 109.46733 * 299.99930 * 7 5 4 28 28 H 1.09002 * 109.47398 * 59.99826 * 8 7 5 29 29 H 1.09001 * 109.47194 * 180.02562 * 8 7 5 30 30 H 0.97000 * 119.99491 * 335.00093 * 11 9 8 31 31 H 1.07994 * 119.57189 * 180.02562 * 14 13 12 32 32 H 1.09005 * 109.46694 * 125.00083 * 16 15 14 33 33 H 0.96692 * 114.00067 * 60.00502 * 17 16 15 34 34 H 1.48505 * 110.00198 * 180.02562 * 18 16 15 35 35 H 1.48504 * 109.99887 * 301.31740 * 18 16 15 36 36 H 1.08000 * 120.74666 * 180.02562 * 19 15 14 37 37 H 1.08003 * 120.45275 * 180.28834 * 20 19 15 38 38 H 1.09000 * 109.47486 * 180.02562 * 21 9 8 39 39 H 1.09002 * 109.46716 * 60.00091 * 21 9 8 40 40 H 1.09002 * 109.47153 * 299.99957 * 22 5 4 41 41 H 1.09001 * 109.47289 * 60.00040 * 22 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 8 3.1228 -1.1004 -0.7761 5 6 4.5473 -1.1917 -0.8416 6 1 4.9799 -0.7855 0.0728 7 6 4.9580 -2.6578 -0.9926 8 6 6.4833 -2.7556 -1.0621 9 6 6.9913 -1.9573 -2.2644 10 1 6.5591 -2.3634 -3.1790 11 7 8.4517 -2.0514 -2.3314 12 6 9.1041 -1.8821 -3.5470 13 7 10.4241 -1.9688 -3.6009 14 6 11.0820 -1.8150 -4.7346 15 6 10.4111 -1.5568 -5.9129 16 6 11.1741 -1.3838 -7.2009 17 8 11.0135 -0.0448 -7.6735 18 14 12.9812 -1.7246 -6.9028 19 6 9.0259 -1.4581 -5.8995 20 6 8.3636 -1.6290 -4.6975 21 6 6.5806 -0.4912 -2.1135 22 6 5.0548 -0.3935 -2.0441 23 1 -1.0499 -0.0001 -0.0003 24 1 3.0093 -0.0918 1.0234 25 1 3.0089 0.9335 -0.4316 26 1 4.5256 -3.0640 -1.9069 27 1 4.5965 -3.2265 -0.1358 28 1 6.9155 -2.3496 -0.1475 29 1 6.7759 -3.8001 -1.1701 30 1 8.9634 -2.2319 -1.5273 31 1 12.1591 -1.8930 -4.7406 32 1 10.7911 -2.0807 -7.9465 33 1 11.3336 0.6300 -7.0595 34 1 13.7449 -1.5567 -8.1653 35 1 13.5076 -0.8020 -5.8650 36 1 8.4779 -1.2572 -6.8082 37 1 7.2865 -1.5635 -4.6519 38 1 6.9421 0.0774 -2.9703 39 1 7.0128 -0.0852 -1.1989 40 1 4.6223 -0.7997 -2.9585 41 1 4.7623 0.6510 -1.9366 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14940686_13915762.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:54:36 Heat of formation + Delta-G solvation = 19.894208 kcal Electronic energy + Delta-G solvation = -22311.446932 eV Core-core repulsion = 18966.465128 eV Total energy + Delta-G solvation = -3344.981805 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.146 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.52735 -40.47717 -38.63921 -37.77530 -35.59903 -34.05222 -33.37797 -32.09215 -31.64657 -29.58282 -27.77300 -26.13937 -24.91185 -23.83694 -23.36694 -22.20685 -21.24674 -19.43214 -18.67719 -18.52490 -18.00264 -17.66942 -16.79430 -16.51909 -16.42814 -16.26725 -15.87403 -15.62242 -15.50533 -14.95088 -14.74340 -14.40597 -14.28440 -14.03346 -13.89071 -13.53027 -13.39566 -13.30466 -12.77862 -12.52995 -12.33608 -12.31578 -11.99045 -11.87112 -11.81146 -11.43353 -11.34701 -11.08832 -10.73297 -10.51549 -10.47114 -10.34176 -8.71512 -4.94215 0.26297 0.44285 1.31645 1.50075 1.60382 1.83816 1.98069 2.02413 2.81153 2.86509 3.39444 3.42387 3.43696 3.58294 3.63057 3.78777 3.84818 3.90764 3.97547 4.01993 4.05510 4.11064 4.18638 4.21212 4.27734 4.34166 4.35740 4.54597 4.57077 4.61063 4.73904 4.76727 4.88425 4.94850 4.94986 4.96683 5.01997 5.09826 5.16713 5.33409 5.53071 5.99388 6.09036 6.43428 6.52950 6.60120 7.17416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.200 4.200 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.066 0.934 7 C -0.112 4.112 8 C -0.123 4.123 9 C 0.152 3.848 10 H 0.086 0.914 11 N -0.719 5.719 12 C 0.410 3.590 13 N -0.540 5.540 14 C 0.155 3.845 15 C -0.234 4.234 16 C -0.059 4.059 17 O -0.532 6.532 18 Si 0.680 3.320 19 C -0.005 4.005 20 C -0.240 4.240 21 C -0.133 4.133 22 C -0.140 4.140 23 H 0.223 0.777 24 H 0.075 0.925 25 H 0.074 0.926 26 H 0.077 0.923 27 H 0.078 0.922 28 H 0.073 0.927 29 H 0.080 0.920 30 H 0.405 0.595 31 H 0.155 0.845 32 H 0.116 0.884 33 H 0.375 0.625 34 H -0.256 1.256 35 H -0.259 1.259 36 H 0.135 0.865 37 H 0.134 0.866 38 H 0.072 0.928 39 H 0.070 0.930 40 H 0.075 0.925 41 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.038 -0.954 2.289 2.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.200 4.200 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.031 3.969 6 H 0.084 0.916 7 C -0.150 4.150 8 C -0.161 4.161 9 C 0.047 3.953 10 H 0.104 0.896 11 N -0.351 5.351 12 C 0.174 3.826 13 N -0.257 5.257 14 C -0.003 4.003 15 C -0.239 4.239 16 C -0.170 4.170 17 O -0.338 6.338 18 Si 0.581 3.419 19 C -0.031 4.031 20 C -0.265 4.265 21 C -0.172 4.172 22 C -0.179 4.179 23 H 0.239 0.761 24 H 0.092 0.908 25 H 0.092 0.908 26 H 0.095 0.905 27 H 0.097 0.903 28 H 0.091 0.909 29 H 0.099 0.901 30 H 0.241 0.759 31 H 0.172 0.828 32 H 0.134 0.866 33 H 0.222 0.778 34 H -0.181 1.181 35 H -0.184 1.184 36 H 0.153 0.847 37 H 0.152 0.848 38 H 0.090 0.910 39 H 0.088 0.912 40 H 0.094 0.906 41 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -0.334 -1.237 2.426 2.743 hybrid contribution -0.692 1.537 -0.156 1.693 sum -1.026 0.301 2.270 2.509 Atomic orbital electron populations 1.25054 0.95987 0.98205 0.99258 1.22497 0.93887 1.02049 1.01570 1.19110 0.84848 0.90499 0.95772 1.87995 1.21210 1.48214 1.72059 1.22195 0.80395 0.96470 0.97819 0.91601 1.21515 0.94403 0.95032 1.04079 1.21750 0.95339 1.01149 0.97832 1.21080 0.78972 0.95446 0.99830 0.89611 1.44586 1.05771 1.77486 1.07208 1.18396 0.88276 0.89498 0.86398 1.67170 1.07456 1.21555 1.29539 1.22268 0.99232 0.92142 0.86634 1.20914 0.95428 1.10792 0.96812 1.24758 1.10260 0.86469 0.95505 1.86593 1.84691 1.14924 1.47610 0.95106 0.74465 0.91509 0.80803 1.21199 0.93289 0.91039 0.97553 1.21501 1.01011 1.11471 0.92477 1.22020 0.95246 0.96699 1.03243 1.22033 0.95130 1.01021 0.99677 0.76065 0.90758 0.90831 0.90452 0.90316 0.90861 0.90150 0.75864 0.82837 0.86602 0.77760 1.18087 1.18364 0.84708 0.84845 0.90970 0.91177 0.90580 0.91178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.17 19.25 29.55 0.57 0.40 16 2 C -0.20 -0.41 13.73 -37.12 -0.51 -0.92 16 3 C 0.17 0.00 6.22 34.37 0.21 0.22 16 4 O -0.38 -0.44 9.95 -35.23 -0.35 -0.79 16 5 C 0.09 -0.13 2.61 -26.73 -0.07 -0.20 16 6 H 0.07 -0.17 7.79 -51.93 -0.40 -0.57 16 7 C -0.11 0.24 5.57 -26.73 -0.15 0.09 16 8 C -0.12 0.37 5.39 -26.73 -0.14 0.23 16 9 C 0.15 -0.34 2.14 -67.93 -0.15 -0.48 16 10 H 0.09 -0.17 6.44 -51.93 -0.33 -0.51 16 11 N -0.72 0.49 5.25 -53.93 -0.28 0.21 16 12 C 0.41 0.59 7.63 -155.02 -1.18 -0.60 16 13 N -0.54 -1.43 10.39 -12.44 -0.13 -1.56 16 14 C 0.15 0.19 9.84 -17.57 -0.17 0.02 16 15 C -0.23 -0.14 5.36 -104.46 -0.56 -0.70 16 16 C -0.06 0.01 2.82 36.01 0.10 0.11 16 17 O -0.53 -0.70 12.84 -35.23 -0.45 -1.16 16 18 Si 0.68 -0.55 29.91 -169.99 -5.08 -5.63 16 19 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 20 C -0.24 -0.14 8.85 -39.23 -0.35 -0.49 16 21 C -0.13 0.29 5.43 -26.71 -0.15 0.14 16 22 C -0.14 0.27 5.54 -26.71 -0.15 0.12 16 23 H 0.22 -0.54 7.80 -54.10 -0.42 -0.96 16 24 H 0.07 -0.12 8.08 -51.93 -0.42 -0.54 16 25 H 0.07 -0.11 7.87 -51.93 -0.41 -0.52 16 26 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 29 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.41 -0.46 8.73 -40.82 -0.36 -0.82 16 31 H 0.15 -0.08 4.85 -52.49 -0.25 -0.33 16 32 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 33 H 0.37 -0.49 8.70 45.56 0.40 -0.09 16 34 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 35 H -0.26 -0.28 7.01 56.52 0.40 0.11 16 36 H 0.14 -0.06 8.06 -52.49 -0.42 -0.49 16 37 H 0.13 -0.12 6.10 -52.48 -0.32 -0.44 16 38 H 0.07 -0.09 7.69 -51.93 -0.40 -0.49 16 39 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 -0.13 7.87 -51.93 -0.41 -0.54 16 LS Contribution 339.44 15.07 5.12 5.12 Total: 0.00 -6.57 339.44 -10.17 -16.74 By element: Atomic # 1 Polarization: -4.57 SS G_CDS: -5.91 Total: -10.48 kcal Atomic # 6 Polarization: 0.62 SS G_CDS: -3.08 Total: -2.45 kcal Atomic # 7 Polarization: -0.94 SS G_CDS: -0.41 Total: -1.35 kcal Atomic # 8 Polarization: -1.14 SS G_CDS: -0.80 Total: -1.94 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -5.08 Total: -5.63 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -6.57 -10.17 -16.74 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14940686_13915762.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.632 kcal (2) G-P(sol) polarization free energy of solvation -6.571 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.061 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.166 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.738 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds