Wall clock time and date at job start Mon Mar 8 2021 08:54:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 O 1.42904 * 109.47460 * 329.57915 * 3 2 1 5 5 C 1.42895 * 113.99892 * 180.02562 * 4 3 2 6 6 H 1.08996 * 109.47554 * 30.00144 * 5 4 3 7 7 C 1.52997 * 109.46920 * 150.00077 * 5 4 3 8 8 C 1.53006 * 109.47127 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.46626 * 299.99539 * 8 7 5 10 10 H 1.08993 * 109.47839 * 299.99931 * 9 8 7 11 11 N 1.46506 * 109.46691 * 179.97438 * 9 8 7 12 12 C 1.39145 * 119.99881 * 155.00300 * 11 9 8 13 13 N 1.32346 * 119.71628 * 0.02562 * 12 11 9 14 14 C 1.32014 * 121.64516 * 179.97438 * 13 12 11 15 15 C 1.37984 * 120.90047 * 359.97438 * 14 13 12 16 16 C 1.50702 * 120.32633 * 179.97438 * 15 14 13 17 17 O 1.42896 * 109.46666 * 120.00060 * 16 15 14 18 18 Si 1.86301 * 109.46965 * 0.02562 * 16 15 14 19 19 C 1.38907 * 119.34775 * 0.02562 * 15 14 13 20 20 C 1.38446 * 118.48341 * 359.74723 * 19 15 14 21 21 F 1.35103 * 120.47113 * 180.26971 * 20 19 15 22 22 C 1.52997 * 109.46991 * 60.00378 * 9 8 7 23 23 C 1.52996 * 109.47131 * 299.99311 * 22 9 8 24 24 H 4.38450 * 5.44358 * 179.97438 * 4 1 2 25 25 H 1.09003 * 109.47045 * 209.57754 * 3 2 1 26 26 H 1.09000 * 109.47009 * 89.58278 * 3 2 1 27 27 H 1.09001 * 109.47502 * 60.00157 * 7 5 4 28 28 H 1.09001 * 109.47289 * 299.99954 * 7 5 4 29 29 H 1.08993 * 109.46955 * 60.00011 * 8 7 5 30 30 H 1.09000 * 109.47050 * 179.97438 * 8 7 5 31 31 H 0.97000 * 120.00279 * 335.00513 * 11 9 8 32 32 H 1.07993 * 119.54718 * 180.02562 * 14 13 12 33 33 H 1.08995 * 109.47057 * 240.00654 * 16 15 14 34 34 H 0.96697 * 114.00700 * 299.99831 * 17 16 15 35 35 H 1.48498 * 110.00184 * 58.67961 * 18 16 15 36 36 H 1.48497 * 109.99853 * 180.02562 * 18 16 15 37 37 H 1.07997 * 120.75445 * 179.97438 * 19 15 14 38 38 H 1.09001 * 109.47289 * 179.97438 * 22 9 8 39 39 H 1.09000 * 109.47611 * 59.99933 * 22 9 8 40 40 H 1.08996 * 109.47452 * 300.00000 * 23 22 9 41 41 H 1.09000 * 109.47054 * 180.02562 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1230 -1.1609 0.6822 5 6 4.5475 -1.2572 0.7398 6 1 4.9793 -0.2565 0.7485 7 6 4.9573 -2.0005 2.0127 8 6 6.4827 -2.1031 2.0747 9 6 6.9925 -2.8674 0.8513 10 1 6.5612 -3.8683 0.8424 11 7 8.4531 -2.9651 0.9104 12 6 9.1081 -4.0022 0.2536 13 7 8.4062 -4.8971 -0.4232 14 6 8.9883 -5.8959 -1.0606 15 6 10.3601 -6.0435 -1.0443 16 6 11.0110 -7.1890 -1.7759 17 8 11.9048 -6.6755 -2.7656 18 14 9.6999 -8.2239 -2.6011 19 6 11.1352 -5.1265 -0.3458 20 6 10.4979 -4.0865 0.3092 21 9 11.2129 -3.1688 0.9960 22 6 6.5827 -2.1241 -0.4216 23 6 5.0574 -2.0216 -0.4836 24 1 -1.0497 -0.0002 0.0003 25 1 3.0090 0.8946 0.5073 26 1 3.0093 -0.0067 -1.0276 27 1 4.5256 -3.0014 2.0040 28 1 4.5945 -1.4558 2.8843 29 1 6.9140 -1.1022 2.0836 30 1 6.7747 -2.6322 2.9818 31 1 8.9636 -2.3068 1.4073 32 1 8.3825 -6.6067 -1.6029 33 1 11.5670 -7.8034 -1.0678 34 1 11.4775 -6.1183 -3.4304 35 1 8.9143 -7.3898 -3.5457 36 1 10.3288 -9.3573 -3.3256 37 1 12.2107 -5.2205 -0.3176 38 1 6.9462 -2.6684 -1.2932 39 1 7.0141 -1.1232 -0.4128 40 1 4.6260 -3.0225 -0.4926 41 1 4.7654 -1.4924 -1.3907 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14940686_17656566.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:54:45 Heat of formation + Delta-G solvation = -25.178589 kcal Electronic energy + Delta-G solvation = -24764.599262 eV Core-core repulsion = 20948.208979 eV Total energy + Delta-G solvation = -3816.390283 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.137 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -49.86386 -41.49877 -40.43926 -38.63010 -37.82597 -35.67443 -34.03134 -33.21996 -31.95263 -31.77799 -29.55682 -27.74627 -26.38567 -24.99230 -23.87530 -23.14998 -22.53376 -21.23291 -19.52054 -19.17107 -18.53719 -18.33400 -17.90668 -17.61998 -16.99851 -16.77046 -16.50003 -16.19026 -16.06557 -15.94582 -15.46408 -15.34566 -14.98495 -14.62667 -14.34877 -14.29937 -14.02055 -13.83415 -13.56364 -13.32321 -13.26478 -12.77959 -12.66519 -12.44521 -12.24394 -12.03815 -11.83415 -11.78091 -11.43596 -11.28952 -11.15699 -10.78320 -10.63053 -10.53524 -10.40165 -8.77545 -5.01440 -0.06494 0.12429 1.21438 1.53627 1.54160 1.86857 1.92042 1.93369 2.55491 2.85128 3.04205 3.25158 3.33546 3.47331 3.54763 3.56205 3.66835 3.83442 3.95727 3.97206 4.05252 4.08623 4.16569 4.24695 4.32384 4.36332 4.40696 4.43651 4.45273 4.63513 4.70489 4.73436 4.86880 4.95017 4.97199 4.99171 5.04328 5.08563 5.16912 5.26266 5.42271 5.94804 6.14547 6.16926 6.34430 6.63166 6.95655 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.064 0.936 7 C -0.111 4.111 8 C -0.125 4.125 9 C 0.155 3.845 10 H 0.096 0.904 11 N -0.714 5.714 12 C 0.392 3.608 13 N -0.511 5.511 14 C 0.148 3.852 15 C -0.209 4.209 16 C -0.061 4.061 17 O -0.530 6.530 18 Si 0.682 3.318 19 C -0.038 4.038 20 C -0.021 4.021 21 F -0.134 7.134 22 C -0.126 4.126 23 C -0.138 4.138 24 H 0.222 0.778 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.078 0.922 28 H 0.077 0.923 29 H 0.070 0.930 30 H 0.078 0.922 31 H 0.411 0.589 32 H 0.163 0.837 33 H 0.120 0.880 34 H 0.376 0.624 35 H -0.256 1.256 36 H -0.254 1.254 37 H 0.149 0.851 38 H 0.073 0.927 39 H 0.062 0.938 40 H 0.077 0.923 41 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.347 0.493 0.849 1.666 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.199 4.199 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.082 0.918 7 C -0.149 4.149 8 C -0.163 4.163 9 C 0.050 3.950 10 H 0.114 0.886 11 N -0.346 5.346 12 C 0.154 3.846 13 N -0.227 5.227 14 C -0.009 4.009 15 C -0.214 4.214 16 C -0.172 4.172 17 O -0.336 6.336 18 Si 0.582 3.418 19 C -0.064 4.064 20 C -0.048 4.048 21 F -0.113 7.113 22 C -0.165 4.165 23 C -0.177 4.177 24 H 0.239 0.761 25 H 0.092 0.908 26 H 0.092 0.908 27 H 0.096 0.904 28 H 0.095 0.905 29 H 0.088 0.912 30 H 0.096 0.904 31 H 0.248 0.752 32 H 0.180 0.820 33 H 0.138 0.862 34 H 0.224 0.776 35 H -0.181 1.181 36 H -0.178 1.178 37 H 0.167 0.833 38 H 0.092 0.908 39 H 0.081 0.919 40 H 0.096 0.904 41 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -2.417 -0.160 0.526 2.479 hybrid contribution 1.718 1.521 -0.490 2.346 sum -0.699 1.361 0.036 1.530 Atomic orbital electron populations 1.25044 0.95976 0.97982 0.99609 1.22511 0.93893 1.02121 1.01385 1.19108 0.84826 0.88933 0.97376 1.87995 1.21278 1.43129 1.77066 1.22199 0.80304 0.98929 0.95409 0.91759 1.21495 0.94378 1.02076 0.96946 1.21787 0.95502 1.01045 0.98012 1.21033 0.78645 1.00879 0.94414 0.88565 1.44680 1.06999 1.27734 1.55174 1.18436 0.86408 0.89011 0.90765 1.67330 1.38414 1.04648 1.12358 1.22348 0.91539 0.93195 0.93809 1.20864 0.94542 1.00902 1.05114 1.24824 1.01259 0.97501 0.93594 1.86608 1.36347 1.69543 1.41136 0.95119 0.80139 0.80673 0.85849 1.21278 1.01544 0.91061 0.92513 1.18011 0.88584 0.93832 1.04358 1.91492 1.77718 1.64414 1.77658 1.21895 0.95133 1.00786 0.98674 1.21998 0.95276 1.02234 0.98157 0.76078 0.90813 0.90846 0.90376 0.90471 0.91158 0.90358 0.75164 0.82035 0.86201 0.77596 1.18083 1.17849 0.83333 0.90837 0.91885 0.90419 0.91407 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.21 19.25 29.55 0.57 0.36 16 2 C -0.20 -0.47 13.73 -37.12 -0.51 -0.98 16 3 C 0.17 0.08 6.22 34.37 0.21 0.29 16 4 O -0.38 -0.64 9.95 -35.23 -0.35 -0.99 16 5 C 0.09 -0.07 2.61 -26.73 -0.07 -0.14 16 6 H 0.06 -0.12 7.79 -51.93 -0.40 -0.53 16 7 C -0.11 0.15 5.57 -26.73 -0.15 0.00 16 8 C -0.13 0.29 5.39 -26.73 -0.14 0.15 16 9 C 0.15 -0.17 2.47 -67.93 -0.17 -0.34 16 10 H 0.10 0.02 7.54 -51.93 -0.39 -0.38 16 11 N -0.71 0.31 5.22 -53.85 -0.28 0.03 16 12 C 0.39 0.47 7.47 -154.85 -1.16 -0.69 16 13 N -0.51 -0.64 9.20 -12.36 -0.11 -0.75 16 14 C 0.15 -0.04 9.84 -17.57 -0.17 -0.21 16 15 C -0.21 0.10 5.40 -104.47 -0.56 -0.47 16 16 C -0.06 0.07 2.84 36.01 0.10 0.18 16 17 O -0.53 -0.20 12.78 -35.23 -0.45 -0.65 16 18 Si 0.68 -1.30 29.82 -169.99 -5.07 -6.37 16 19 C -0.04 -0.02 9.75 -39.26 -0.38 -0.40 16 20 C -0.02 -0.03 7.35 -39.10 -0.29 -0.32 16 21 F -0.13 -0.27 16.65 2.25 0.04 -0.23 16 22 C -0.13 0.12 5.51 -26.73 -0.15 -0.02 16 23 C -0.14 0.12 5.54 -26.73 -0.15 -0.02 16 24 H 0.22 -0.49 7.80 -54.10 -0.42 -0.91 16 25 H 0.07 -0.09 8.08 -51.93 -0.42 -0.51 16 26 H 0.07 -0.08 7.87 -51.93 -0.41 -0.49 16 27 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 28 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 29 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 31 H 0.41 -0.61 8.07 -40.82 -0.33 -0.94 16 32 H 0.16 -0.39 4.88 -52.49 -0.26 -0.64 16 33 H 0.12 -0.23 7.96 -51.93 -0.41 -0.65 16 34 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 35 H -0.26 0.01 7.11 56.52 0.40 0.41 16 36 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 37 H 0.15 -0.04 8.06 -52.49 -0.42 -0.47 16 38 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 39 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 -0.07 7.87 -51.93 -0.41 -0.48 16 LS Contribution 348.38 15.07 5.25 5.25 Total: 0.00 -6.30 348.38 -9.63 -15.92 By element: Atomic # 1 Polarization: -3.96 SS G_CDS: -5.64 Total: -9.59 kcal Atomic # 6 Polarization: 0.39 SS G_CDS: -3.01 Total: -2.62 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.40 Total: -0.72 kcal Atomic # 8 Polarization: -0.84 SS G_CDS: -0.80 Total: -1.64 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.04 Total: -0.23 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.07 Total: -6.37 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -6.30 -9.63 -15.92 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14940686_17656566.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.254 kcal (2) G-P(sol) polarization free energy of solvation -6.296 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.550 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.628 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.924 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.179 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds