Wall clock time and date at job start Mon Mar 8 2021 06:09:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.46500 * 120.00074 * 2 1 4 4 C 1.53006 * 109.46998 * 89.99772 * 3 2 1 5 5 H 1.08995 * 112.85092 * 316.19521 * 4 3 2 6 6 C 1.53783 * 113.61172 * 87.50262 * 4 3 2 7 7 C 1.53786 * 87.07879 * 139.97819 * 6 4 3 8 8 H 1.09002 * 113.61184 * 89.11275 * 7 6 4 9 9 O 1.42898 * 113.61612 * 220.01628 * 7 6 4 10 10 C 1.42901 * 114.00053 * 247.49925 * 9 7 6 11 11 C 1.52997 * 109.47166 * 59.99826 * 10 9 7 12 12 C 1.52999 * 109.47087 * 180.02562 * 10 9 7 13 13 C 1.53001 * 109.47003 * 299.99601 * 10 9 7 14 14 C 1.53781 * 113.61256 * 185.00048 * 4 3 2 15 15 C 1.38410 * 120.00088 * 179.97438 * 2 1 3 16 16 N 1.32486 * 119.21961 * 179.73343 * 15 2 1 17 17 C 1.32281 * 120.74348 * 179.72559 * 16 15 2 18 18 C 1.38604 * 119.19381 * 0.54059 * 17 16 15 19 19 C 1.50692 * 120.72076 * 179.75637 * 18 17 16 20 20 O 1.42896 * 109.47280 * 119.98118 * 19 18 17 21 21 Si 1.86305 * 109.47259 * 359.97438 * 19 18 17 22 22 C 1.38603 * 118.55807 * 359.73356 * 18 17 16 23 23 N 1.32277 * 119.19836 * 0.02562 * 22 18 17 24 24 H 1.09002 * 109.47156 * 90.00140 * 1 2 3 25 25 H 1.09002 * 109.47201 * 210.00104 * 1 2 3 26 26 H 1.09001 * 109.47041 * 330.00278 * 1 2 3 27 27 H 1.08993 * 109.47452 * 329.99850 * 3 2 1 28 28 H 1.09000 * 109.47175 * 209.99640 * 3 2 1 29 29 H 1.08996 * 113.61199 * 254.52053 * 6 4 3 30 30 H 1.08996 * 113.61879 * 25.43558 * 6 4 3 31 31 H 1.08999 * 109.46807 * 59.99926 * 11 10 9 32 32 H 1.08999 * 109.46723 * 180.02562 * 11 10 9 33 33 H 1.08994 * 109.47145 * 299.99862 * 11 10 9 34 34 H 1.08998 * 109.47027 * 59.99730 * 12 10 9 35 35 H 1.09003 * 109.47067 * 180.02562 * 12 10 9 36 36 H 1.08999 * 109.46918 * 300.00094 * 12 10 9 37 37 H 1.09008 * 109.47213 * 60.00333 * 13 10 9 38 38 H 1.09000 * 109.47293 * 179.97438 * 13 10 9 39 39 H 1.08998 * 109.47511 * 300.00515 * 13 10 9 40 40 H 1.09007 * 113.61545 * 334.56848 * 14 4 3 41 41 H 1.08996 * 113.61597 * 105.38544 * 14 4 3 42 42 H 1.07994 * 120.40288 * 180.25038 * 17 16 15 43 43 H 1.09008 * 109.47294 * 239.97531 * 19 18 17 44 44 H 0.96699 * 113.99746 * 299.99601 * 20 19 18 45 45 H 1.48494 * 109.99947 * 58.68182 * 21 19 18 46 46 H 1.48497 * 109.99736 * 180.02562 * 21 19 18 47 47 H 1.08008 * 120.40543 * 180.02562 * 22 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4524 1.7104 1.4426 5 1 1.5791 1.5884 2.0832 6 6 3.7452 1.1342 2.0438 7 6 3.9635 2.5109 2.6935 8 1 3.5040 2.6072 3.6773 9 8 5.3245 2.9456 2.6703 10 6 5.9358 3.0114 3.9603 11 6 5.9158 1.6242 4.6055 12 6 7.3830 3.4862 3.8153 13 6 5.1628 3.9949 4.8413 14 6 3.1104 3.0957 1.5554 15 6 2.1570 -1.1987 0.0005 16 7 3.4817 -1.1806 -0.0049 17 6 4.1734 -2.3082 0.0009 18 6 3.4955 -3.5171 0.0013 19 6 4.2490 -4.8222 0.0023 20 8 3.9037 -5.5707 1.1696 21 14 6.0807 -4.4818 0.0020 22 6 2.1096 -3.4997 0.0013 23 7 1.4789 -2.3369 0.0004 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3634 -0.8900 0.5139 26 1 -0.3633 0.8900 0.5138 27 1 1.6085 2.0284 -0.5138 28 1 3.1499 1.1384 -0.5138 29 1 3.5732 0.3341 2.7637 30 1 4.4980 0.8793 1.2979 31 1 6.4665 0.9237 3.9777 32 1 6.3816 1.6746 5.5896 33 1 4.8847 1.2864 4.7088 34 1 7.3968 4.4745 3.3558 35 1 7.8494 3.5360 4.7992 36 1 7.9339 2.7860 3.1874 37 1 4.1316 3.6570 4.9447 38 1 5.6287 4.0447 5.8254 39 1 5.1770 4.9831 4.3817 40 1 3.6896 3.3770 0.6759 41 1 2.4256 3.8793 1.8796 42 1 5.2532 -2.2870 0.0006 43 1 3.9857 -5.3945 -0.8873 44 1 4.1105 -5.1212 2.0004 45 1 6.4475 -3.6750 1.1935 46 1 6.8349 -5.7610 0.0024 47 1 1.5513 -4.4242 0.0020 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15093194_12175864.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:09:18 Heat of formation + Delta-G solvation = 13.409818 kcal Electronic energy + Delta-G solvation = -26564.941308 eV Core-core repulsion = 22944.091832 eV Total energy + Delta-G solvation = -3620.849476 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.189 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.07135 -40.83961 -38.93472 -38.09299 -36.91304 -34.65442 -33.80364 -32.76421 -29.72962 -28.40145 -28.38438 -28.00145 -26.51541 -25.71649 -25.28362 -23.72916 -22.29900 -20.79830 -20.49154 -19.00938 -18.73467 -17.98639 -17.64856 -16.86705 -16.41446 -16.30762 -16.03591 -15.93302 -15.80250 -15.59340 -15.27163 -14.65602 -14.50263 -14.42334 -14.27517 -13.99462 -13.52631 -13.39842 -13.32130 -13.27056 -13.08114 -13.03264 -12.89216 -12.75966 -12.67552 -12.23409 -12.15891 -12.01673 -11.77717 -11.74022 -11.66688 -11.32171 -11.23514 -11.00538 -10.66558 -10.26650 -9.91857 -8.83204 -5.01045 0.13406 0.24108 1.24350 1.54421 1.67393 1.93066 2.76664 2.89799 3.20889 3.33394 3.46353 3.64802 3.69293 3.76300 3.77100 3.86313 3.88066 3.91391 4.01919 4.09742 4.17817 4.25422 4.31088 4.41655 4.47185 4.55131 4.56094 4.57755 4.63617 4.75814 4.77072 4.81775 4.84226 4.87756 4.89777 4.90955 4.93628 4.95474 5.09970 5.13241 5.20826 5.30406 5.31843 5.36566 5.51703 5.82756 5.91801 6.35486 6.44112 6.48512 7.32545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.100 3.900 2 N -0.583 5.583 3 C 0.142 3.858 4 C -0.129 4.129 5 H 0.088 0.912 6 C -0.134 4.134 7 C 0.059 3.941 8 H 0.086 0.914 9 O -0.360 6.360 10 C 0.106 3.894 11 C -0.175 4.175 12 C -0.139 4.139 13 C -0.179 4.179 14 C -0.126 4.126 15 C 0.568 3.432 16 N -0.556 5.556 17 C 0.199 3.801 18 C -0.295 4.295 19 C -0.051 4.051 20 O -0.530 6.530 21 Si 0.676 3.324 22 C 0.222 3.778 23 N -0.569 5.569 24 H 0.054 0.946 25 H 0.080 0.920 26 H 0.070 0.930 27 H 0.080 0.920 28 H 0.093 0.907 29 H 0.055 0.945 30 H 0.100 0.900 31 H 0.064 0.936 32 H 0.064 0.936 33 H 0.056 0.944 34 H 0.063 0.937 35 H 0.069 0.931 36 H 0.063 0.937 37 H 0.058 0.942 38 H 0.066 0.934 39 H 0.065 0.935 40 H 0.093 0.907 41 H 0.071 0.929 42 H 0.165 0.835 43 H 0.119 0.881 44 H 0.375 0.625 45 H -0.258 1.258 46 H -0.253 1.253 47 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.026 1.956 -0.150 1.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.043 4.043 2 N -0.298 5.298 3 C 0.019 3.981 4 C -0.149 4.149 5 H 0.107 0.893 6 C -0.171 4.171 7 C 0.001 3.999 8 H 0.103 0.897 9 O -0.279 6.279 10 C 0.067 3.933 11 C -0.232 4.232 12 C -0.196 4.196 13 C -0.236 4.236 14 C -0.164 4.164 15 C 0.213 3.787 16 N -0.277 5.277 17 C 0.031 3.969 18 C -0.304 4.304 19 C -0.163 4.163 20 O -0.336 6.336 21 Si 0.577 3.423 22 C 0.053 3.947 23 N -0.290 5.290 24 H 0.073 0.927 25 H 0.099 0.901 26 H 0.088 0.912 27 H 0.098 0.902 28 H 0.111 0.889 29 H 0.074 0.926 30 H 0.119 0.881 31 H 0.083 0.917 32 H 0.083 0.917 33 H 0.075 0.925 34 H 0.083 0.917 35 H 0.088 0.912 36 H 0.083 0.917 37 H 0.077 0.923 38 H 0.085 0.915 39 H 0.084 0.916 40 H 0.112 0.888 41 H 0.090 0.910 42 H 0.181 0.819 43 H 0.137 0.863 44 H 0.223 0.777 45 H -0.182 1.182 46 H -0.178 1.178 47 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 0.042 2.570 -0.357 2.595 hybrid contribution -0.310 -1.033 1.459 1.814 sum -0.268 1.537 1.103 1.910 Atomic orbital electron populations 1.21671 0.77438 1.03276 1.01950 1.46088 1.05765 1.01720 1.76233 1.21512 0.97868 0.82901 0.95770 1.22758 0.97887 0.96824 0.97393 0.89328 1.23500 0.97235 0.96087 1.00326 1.23653 0.82922 0.95200 0.98150 0.89667 1.88039 1.24791 1.87184 1.27932 1.21501 0.93827 0.94236 0.83776 1.22454 1.02366 0.97136 1.01291 1.21765 0.93291 1.02110 1.02418 1.22470 1.00580 1.00170 1.00399 1.23198 0.97769 0.96027 0.99455 1.19326 0.85303 0.86354 0.87732 1.67929 1.06824 1.31091 1.21862 1.22767 0.99725 0.86570 0.87877 1.21614 0.97072 0.97437 1.14259 1.24648 1.09386 0.91201 0.91051 1.86604 1.84954 1.46336 1.15741 0.95240 0.74627 0.83016 0.89446 1.22816 0.90927 0.95174 0.85744 1.67989 1.40828 0.97897 1.22311 0.92729 0.90118 0.91177 0.90196 0.88868 0.92632 0.88139 0.91728 0.91671 0.92501 0.91744 0.91181 0.91749 0.92346 0.91464 0.91593 0.88816 0.91014 0.81863 0.86287 0.77724 1.18226 1.17790 0.81465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 -0.05 10.44 59.84 0.62 0.58 16 2 N -0.58 -0.67 2.97 -183.94 -0.55 -1.22 16 3 C 0.14 -0.03 5.25 -4.04 -0.02 -0.05 16 4 C -0.13 0.04 3.96 -89.80 -0.36 -0.31 16 5 H 0.09 -0.01 8.14 -51.93 -0.42 -0.44 16 6 C -0.13 -0.13 6.79 -25.92 -0.18 -0.30 16 7 C 0.06 0.04 2.82 -25.92 -0.07 -0.03 16 8 H 0.09 0.03 5.55 -51.93 -0.29 -0.26 16 9 O -0.36 -0.82 10.00 -35.23 -0.35 -1.18 16 10 C 0.11 0.08 1.11 -90.62 -0.10 -0.02 16 11 C -0.17 -0.06 8.39 37.16 0.31 0.26 16 12 C -0.14 -0.02 8.84 37.16 0.33 0.31 16 13 C -0.18 0.02 8.38 37.16 0.31 0.33 16 14 C -0.13 0.05 7.47 -25.92 -0.19 -0.14 16 15 C 0.57 1.58 8.17 -322.81 -2.64 -1.06 16 16 N -0.56 -1.24 8.06 -13.93 -0.11 -1.35 16 17 C 0.20 0.10 9.92 -17.22 -0.17 -0.07 16 18 C -0.30 -0.03 5.40 -104.36 -0.56 -0.60 16 19 C -0.05 0.05 2.85 36.00 0.10 0.15 16 20 O -0.53 -0.25 12.79 -35.23 -0.45 -0.71 16 21 Si 0.68 -1.00 29.87 -169.99 -5.08 -6.07 16 22 C 0.22 0.28 10.92 -17.23 -0.19 0.09 16 23 N -0.57 -1.68 9.11 -13.93 -0.13 -1.80 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.08 0.04 7.33 -51.93 -0.38 -0.34 16 26 H 0.07 -0.15 8.07 -51.93 -0.42 -0.57 16 27 H 0.08 -0.13 8.07 -51.93 -0.42 -0.55 16 28 H 0.09 0.08 7.03 -51.93 -0.37 -0.29 16 29 H 0.05 0.11 8.14 -51.93 -0.42 -0.31 16 30 H 0.10 0.23 7.53 -51.93 -0.39 -0.16 16 31 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 33 H 0.06 0.03 7.02 -51.93 -0.36 -0.34 16 34 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 35 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.06 -0.01 6.25 -51.92 -0.32 -0.34 16 38 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 40 H 0.09 0.00 8.10 -51.93 -0.42 -0.43 16 41 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.16 -0.28 5.04 -52.49 -0.26 -0.54 16 43 H 0.12 -0.21 7.96 -51.92 -0.41 -0.63 16 44 H 0.38 -0.75 8.70 45.56 0.40 -0.35 16 45 H -0.26 -0.13 7.11 56.52 0.40 0.28 16 46 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 47 H 0.17 -0.07 8.06 -52.48 -0.42 -0.49 16 LS Contribution 372.00 15.07 5.61 5.61 Total: 0.00 -5.60 372.00 -11.79 -17.38 By element: Atomic # 1 Polarization: -1.86 SS G_CDS: -7.93 Total: -9.78 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -2.80 Total: -0.88 kcal Atomic # 7 Polarization: -3.59 SS G_CDS: -0.79 Total: -4.37 kcal Atomic # 8 Polarization: -1.08 SS G_CDS: -0.80 Total: -1.88 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.08 Total: -6.07 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -5.60 -11.79 -17.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15093194_12175864.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.794 kcal (2) G-P(sol) polarization free energy of solvation -5.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.789 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.385 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds