Wall clock time and date at job start Mon Mar 8 2021 06:09:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.46500 * 120.00074 * 2 1 4 4 C 1.53006 * 109.46998 * 89.99772 * 3 2 1 5 5 H 1.08995 * 112.85092 * 316.19521 * 4 3 2 6 6 C 1.53783 * 113.61172 * 87.50262 * 4 3 2 7 7 C 1.53786 * 87.07879 * 139.97819 * 6 4 3 8 8 H 1.09002 * 113.61184 * 89.11275 * 7 6 4 9 9 O 1.42898 * 113.61612 * 220.01628 * 7 6 4 10 10 C 1.42901 * 114.00053 * 247.49925 * 9 7 6 11 11 C 1.52997 * 109.47166 * 59.99826 * 10 9 7 12 12 C 1.52999 * 109.47087 * 180.02562 * 10 9 7 13 13 C 1.53001 * 109.47003 * 299.99601 * 10 9 7 14 14 C 1.53781 * 113.61256 * 185.00048 * 4 3 2 15 15 C 1.38410 * 120.00088 * 179.97438 * 2 1 3 16 16 N 1.32486 * 119.21961 * 179.73343 * 15 2 1 17 17 C 1.32281 * 120.74348 * 179.72559 * 16 15 2 18 18 C 1.38604 * 119.19381 * 0.54059 * 17 16 15 19 19 C 1.50692 * 120.72076 * 179.75637 * 18 17 16 20 20 O 1.42896 * 109.47280 * 119.98118 * 19 18 17 21 21 Si 1.86305 * 109.47259 * 359.97438 * 19 18 17 22 22 C 1.38603 * 118.55807 * 359.73356 * 18 17 16 23 23 N 1.32277 * 119.19836 * 0.02562 * 22 18 17 24 24 H 1.09002 * 109.47156 * 90.00140 * 1 2 3 25 25 H 1.09002 * 109.47201 * 210.00104 * 1 2 3 26 26 H 1.09001 * 109.47041 * 330.00278 * 1 2 3 27 27 H 1.08993 * 109.47452 * 329.99850 * 3 2 1 28 28 H 1.09000 * 109.47175 * 209.99640 * 3 2 1 29 29 H 1.08996 * 113.61199 * 254.52053 * 6 4 3 30 30 H 1.08996 * 113.61879 * 25.43558 * 6 4 3 31 31 H 1.08999 * 109.46807 * 59.99926 * 11 10 9 32 32 H 1.08999 * 109.46723 * 180.02562 * 11 10 9 33 33 H 1.08994 * 109.47145 * 299.99862 * 11 10 9 34 34 H 1.08998 * 109.47027 * 59.99730 * 12 10 9 35 35 H 1.09003 * 109.47067 * 180.02562 * 12 10 9 36 36 H 1.08999 * 109.46918 * 300.00094 * 12 10 9 37 37 H 1.09008 * 109.47213 * 60.00333 * 13 10 9 38 38 H 1.09000 * 109.47293 * 179.97438 * 13 10 9 39 39 H 1.08998 * 109.47511 * 300.00515 * 13 10 9 40 40 H 1.09007 * 113.61545 * 334.56848 * 14 4 3 41 41 H 1.08996 * 113.61597 * 105.38544 * 14 4 3 42 42 H 1.07994 * 120.40288 * 180.25038 * 17 16 15 43 43 H 1.09008 * 109.47294 * 239.97531 * 19 18 17 44 44 H 0.96699 * 113.99746 * 299.99601 * 20 19 18 45 45 H 1.48494 * 109.99947 * 58.68182 * 21 19 18 46 46 H 1.48497 * 109.99736 * 180.02562 * 21 19 18 47 47 H 1.08008 * 120.40543 * 180.02562 * 22 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4524 1.7104 1.4426 5 1 1.5791 1.5884 2.0832 6 6 3.7452 1.1342 2.0438 7 6 3.9635 2.5109 2.6935 8 1 3.5040 2.6072 3.6773 9 8 5.3245 2.9456 2.6703 10 6 5.9358 3.0114 3.9603 11 6 5.9158 1.6242 4.6055 12 6 7.3830 3.4862 3.8153 13 6 5.1628 3.9949 4.8413 14 6 3.1104 3.0957 1.5554 15 6 2.1570 -1.1987 0.0005 16 7 3.4817 -1.1806 -0.0049 17 6 4.1734 -2.3082 0.0009 18 6 3.4955 -3.5171 0.0013 19 6 4.2490 -4.8222 0.0023 20 8 3.9037 -5.5707 1.1696 21 14 6.0807 -4.4818 0.0020 22 6 2.1096 -3.4997 0.0013 23 7 1.4789 -2.3369 0.0004 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3634 -0.8900 0.5139 26 1 -0.3633 0.8900 0.5138 27 1 1.6085 2.0284 -0.5138 28 1 3.1499 1.1384 -0.5138 29 1 3.5732 0.3341 2.7637 30 1 4.4980 0.8793 1.2979 31 1 6.4665 0.9237 3.9777 32 1 6.3816 1.6746 5.5896 33 1 4.8847 1.2864 4.7088 34 1 7.3968 4.4745 3.3558 35 1 7.8494 3.5360 4.7992 36 1 7.9339 2.7860 3.1874 37 1 4.1316 3.6570 4.9447 38 1 5.6287 4.0447 5.8254 39 1 5.1770 4.9831 4.3817 40 1 3.6896 3.3770 0.6759 41 1 2.4256 3.8793 1.8796 42 1 5.2532 -2.2870 0.0006 43 1 3.9857 -5.3945 -0.8873 44 1 4.1105 -5.1212 2.0004 45 1 6.4475 -3.6750 1.1935 46 1 6.8349 -5.7610 0.0024 47 1 1.5513 -4.4242 0.0020 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15093194_12175864.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:09:17 Heat of formation + Delta-G solvation = 20.751150 kcal Electronic energy + Delta-G solvation = -26564.622964 eV Core-core repulsion = 22944.091832 eV Total energy + Delta-G solvation = -3620.531132 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.189 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.13508 -40.88528 -38.96250 -38.10917 -36.93437 -34.74114 -33.86299 -32.80605 -29.72785 -28.40856 -28.39003 -28.01248 -26.55439 -25.75828 -25.30147 -23.75869 -22.33451 -20.83670 -20.51798 -19.05683 -18.78173 -18.01418 -17.69489 -16.90984 -16.43362 -16.32475 -16.05553 -15.97096 -15.82662 -15.61436 -15.29071 -14.68255 -14.53482 -14.44729 -14.28204 -14.05671 -13.51007 -13.39817 -13.32882 -13.30129 -13.10704 -13.00383 -12.90050 -12.76278 -12.69943 -12.30746 -12.18281 -12.04821 -11.86578 -11.76519 -11.71595 -11.34687 -11.26724 -11.03947 -10.67400 -10.33485 -9.99876 -8.86742 -4.93390 0.06953 0.16988 1.30459 1.58494 1.66582 1.95494 2.73300 2.82362 3.18376 3.39433 3.46095 3.63654 3.68138 3.72901 3.76300 3.84373 3.85758 3.89495 3.99895 4.08065 4.16328 4.25290 4.36278 4.42680 4.50055 4.56784 4.58294 4.63225 4.65680 4.74471 4.77328 4.80082 4.83309 4.88171 4.89903 4.90451 4.93680 4.94452 5.06094 5.10110 5.18951 5.28578 5.29786 5.34082 5.47985 5.83599 5.86186 6.37535 6.43745 6.46751 7.24483 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.100 3.900 2 N -0.586 5.586 3 C 0.144 3.856 4 C -0.118 4.118 5 H 0.091 0.909 6 C -0.130 4.130 7 C 0.056 3.944 8 H 0.090 0.910 9 O -0.379 6.379 10 C 0.099 3.901 11 C -0.172 4.172 12 C -0.139 4.139 13 C -0.176 4.176 14 C -0.119 4.119 15 C 0.551 3.449 16 N -0.568 5.568 17 C 0.192 3.808 18 C -0.287 4.287 19 C -0.054 4.054 20 O -0.546 6.546 21 Si 0.754 3.246 22 C 0.211 3.789 23 N -0.588 5.588 24 H 0.056 0.944 25 H 0.068 0.932 26 H 0.089 0.911 27 H 0.098 0.902 28 H 0.081 0.919 29 H 0.041 0.959 30 H 0.086 0.914 31 H 0.054 0.946 32 H 0.075 0.925 33 H 0.053 0.947 34 H 0.060 0.940 35 H 0.083 0.917 36 H 0.057 0.943 37 H 0.059 0.941 38 H 0.076 0.924 39 H 0.062 0.938 40 H 0.090 0.910 41 H 0.083 0.917 42 H 0.182 0.818 43 H 0.131 0.869 44 H 0.384 0.616 45 H -0.282 1.282 46 H -0.297 1.297 47 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.243 2.515 -0.062 2.528 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.042 4.042 2 N -0.301 5.301 3 C 0.022 3.978 4 C -0.138 4.138 5 H 0.109 0.891 6 C -0.168 4.168 7 C -0.001 4.001 8 H 0.108 0.892 9 O -0.298 6.298 10 C 0.060 3.940 11 C -0.229 4.229 12 C -0.196 4.196 13 C -0.233 4.233 14 C -0.157 4.157 15 C 0.196 3.804 16 N -0.290 5.290 17 C 0.024 3.976 18 C -0.295 4.295 19 C -0.164 4.164 20 O -0.354 6.354 21 Si 0.659 3.341 22 C 0.044 3.956 23 N -0.310 5.310 24 H 0.075 0.925 25 H 0.087 0.913 26 H 0.108 0.892 27 H 0.117 0.883 28 H 0.100 0.900 29 H 0.060 0.940 30 H 0.104 0.896 31 H 0.073 0.927 32 H 0.094 0.906 33 H 0.072 0.928 34 H 0.080 0.920 35 H 0.102 0.898 36 H 0.076 0.924 37 H 0.078 0.922 38 H 0.095 0.905 39 H 0.081 0.919 40 H 0.109 0.891 41 H 0.102 0.898 42 H 0.199 0.801 43 H 0.149 0.851 44 H 0.233 0.767 45 H -0.209 1.209 46 H -0.225 1.225 47 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges -0.245 3.142 -0.274 3.163 hybrid contribution -0.185 -1.261 1.461 1.938 sum -0.431 1.881 1.187 2.266 Atomic orbital electron populations 1.21722 0.76662 1.03640 1.02177 1.46290 1.06342 1.01609 1.75900 1.21536 0.97649 0.82868 0.95776 1.22673 0.97219 0.96570 0.97293 0.89088 1.23390 0.97751 0.95892 0.99745 1.23742 0.82623 0.95038 0.98739 0.89240 1.88017 1.25534 1.87315 1.28961 1.21640 0.94169 0.94637 0.83506 1.22419 1.02114 0.96756 1.01609 1.21786 0.93053 1.01680 1.03058 1.22443 1.00634 0.99646 1.00614 1.23143 0.97542 0.96175 0.98829 1.19603 0.85683 0.86895 0.88258 1.67970 1.06818 1.31814 1.22362 1.23122 1.00587 0.86447 0.87438 1.21649 0.96707 0.97684 1.13459 1.24809 1.09645 0.90781 0.91186 1.86580 1.85218 1.47018 1.16573 0.94320 0.72388 0.79742 0.87628 1.23107 0.91617 0.95240 0.85648 1.68001 1.41422 0.98420 1.23162 0.92531 0.91318 0.89205 0.88345 0.90045 0.94046 0.89577 0.92652 0.90613 0.92809 0.92040 0.89845 0.92386 0.92189 0.90504 0.91908 0.89128 0.89795 0.80135 0.85105 0.76667 1.20902 1.22514 0.80288 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 -0.09 10.44 127.77 1.33 1.24 16 2 N -0.59 -1.55 2.97 -735.85 -2.19 -3.73 16 3 C 0.14 -0.06 5.25 86.38 0.45 0.40 16 4 C -0.12 0.07 3.96 -10.26 -0.04 0.03 16 5 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 6 C -0.13 -0.38 6.79 31.12 0.21 -0.16 16 7 C 0.06 0.10 2.82 31.12 0.09 0.19 16 8 H 0.09 0.06 5.55 -2.39 -0.01 0.05 16 9 O -0.38 -1.95 10.00 -148.98 -1.49 -3.44 16 10 C 0.10 0.18 1.11 -10.79 -0.01 0.16 16 11 C -0.17 -0.18 8.39 71.98 0.60 0.43 16 12 C -0.14 -0.07 8.84 71.98 0.64 0.56 16 13 C -0.18 0.08 8.38 71.98 0.60 0.69 16 14 C -0.12 0.13 7.47 31.12 0.23 0.36 16 15 C 0.55 3.49 8.17 261.49 2.14 5.62 16 16 N -0.57 -3.00 8.06 -197.99 -1.60 -4.60 16 17 C 0.19 0.28 9.92 84.71 0.84 1.12 16 18 C -0.29 -0.11 5.40 -19.69 -0.11 -0.22 16 19 C -0.05 0.11 2.85 71.23 0.20 0.32 16 20 O -0.55 -0.50 12.79 -148.98 -1.90 -2.40 16 21 Si 0.75 -2.13 29.87 68.60 2.05 -0.08 16 22 C 0.21 0.62 10.92 84.71 0.93 1.54 16 23 N -0.59 -3.91 9.11 -197.98 -1.80 -5.72 16 24 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 25 H 0.07 0.12 7.33 -2.39 -0.02 0.10 16 26 H 0.09 -0.47 8.07 -2.39 -0.02 -0.49 16 27 H 0.10 -0.41 8.07 -2.39 -0.02 -0.43 16 28 H 0.08 0.19 7.03 -2.39 -0.02 0.17 16 29 H 0.04 0.23 8.14 -2.39 -0.02 0.21 16 30 H 0.09 0.52 7.53 -2.39 -0.02 0.50 16 31 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 32 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 33 H 0.05 0.08 7.02 -2.39 -0.02 0.07 16 34 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 35 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 36 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.06 -0.05 6.25 -2.38 -0.01 -0.07 16 38 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 39 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 40 H 0.09 -0.01 8.10 -2.38 -0.02 -0.03 16 41 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 42 H 0.18 -0.60 5.04 -2.91 -0.01 -0.61 16 43 H 0.13 -0.57 7.96 -2.38 -0.02 -0.59 16 44 H 0.38 -1.47 8.70 -74.06 -0.64 -2.11 16 45 H -0.28 -0.37 7.11 99.48 0.71 0.34 16 46 H -0.30 -1.42 7.11 99.48 0.71 -0.71 16 47 H 0.18 -0.10 8.06 -2.91 -0.02 -0.12 16 Total: 0.00 -13.72 372.00 1.52 -12.19 By element: Atomic # 1 Polarization: -4.84 SS G_CDS: 0.34 Total: -4.50 kcal Atomic # 6 Polarization: 4.17 SS G_CDS: 8.11 Total: 12.28 kcal Atomic # 7 Polarization: -8.46 SS G_CDS: -5.59 Total: -14.05 kcal Atomic # 8 Polarization: -2.45 SS G_CDS: -3.39 Total: -5.85 kcal Atomic # 14 Polarization: -2.13 SS G_CDS: 2.05 Total: -0.08 kcal Total: -13.72 1.52 -12.19 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15093194_12175864.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.946 kcal (2) G-P(sol) polarization free energy of solvation -13.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.195 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds