Wall clock time and date at job start Mon Mar 8 2021 06:09:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.46500 * 119.99794 * 2 1 4 4 C 1.53003 * 109.46711 * 269.99602 * 3 2 1 5 5 H 1.09002 * 112.84873 * 316.19408 * 4 3 2 6 6 C 1.53779 * 113.61494 * 87.50968 * 4 3 2 7 7 C 1.53777 * 87.08456 * 139.97909 * 6 4 3 8 8 H 1.08998 * 113.69322 * 89.12078 * 7 6 4 9 9 O 1.42899 * 113.61274 * 220.02097 * 7 6 4 10 10 C 1.42907 * 113.99702 * 247.49222 * 9 7 6 11 11 C 1.53001 * 109.46666 * 60.00263 * 10 9 7 12 12 C 1.53001 * 109.46832 * 180.02562 * 10 9 7 13 13 C 1.52997 * 109.47163 * 300.00337 * 10 9 7 14 14 C 1.53785 * 113.61104 * 185.00572 * 4 3 2 15 15 C 1.39002 * 119.99848 * 179.97438 * 2 1 3 16 16 N 1.32393 * 119.70320 * 185.00549 * 15 2 1 17 17 C 1.31975 * 121.62238 * 180.02562 * 16 15 2 18 18 C 1.38021 * 120.85607 * 359.97438 * 17 16 15 19 19 C 1.50700 * 120.33803 * 179.97438 * 18 17 16 20 20 O 1.42901 * 109.47511 * 120.02073 * 19 18 17 21 21 Si 1.86297 * 109.46900 * 0.02562 * 19 18 17 22 22 C 1.38885 * 119.33146 * 359.97438 * 18 17 16 23 23 C 1.38298 * 118.50320 * 0.02562 * 22 18 17 24 24 H 1.08997 * 109.47022 * 270.00337 * 1 2 3 25 25 H 1.09003 * 109.46803 * 30.00485 * 1 2 3 26 26 H 1.08996 * 109.47041 * 150.00319 * 1 2 3 27 27 H 1.08991 * 109.47485 * 29.99605 * 3 2 1 28 28 H 1.09000 * 109.46586 * 150.00294 * 3 2 1 29 29 H 1.09006 * 113.61036 * 254.52923 * 6 4 3 30 30 H 1.08995 * 113.61532 * 25.42300 * 6 4 3 31 31 H 1.08990 * 109.47542 * 59.99861 * 11 10 9 32 32 H 1.09003 * 109.46781 * 180.02562 * 11 10 9 33 33 H 1.09003 * 109.46942 * 299.99206 * 11 10 9 34 34 H 1.09002 * 109.47076 * 60.00287 * 12 10 9 35 35 H 1.09003 * 109.46597 * 179.97438 * 12 10 9 36 36 H 1.09004 * 109.46993 * 300.00044 * 12 10 9 37 37 H 1.09002 * 109.47558 * 59.99481 * 13 10 9 38 38 H 1.08998 * 109.46940 * 180.02562 * 13 10 9 39 39 H 1.09002 * 109.47123 * 299.99944 * 13 10 9 40 40 H 1.09003 * 113.61257 * 334.56292 * 14 4 3 41 41 H 1.08994 * 113.61836 * 105.39061 * 14 4 3 42 42 H 1.07998 * 119.57374 * 180.02562 * 17 16 15 43 43 H 1.09000 * 109.47083 * 240.02269 * 19 18 17 44 44 H 0.96699 * 113.99785 * 179.97438 * 20 19 18 45 45 H 1.48502 * 110.00189 * 60.00373 * 21 19 18 46 46 H 1.48501 * 110.00286 * 181.32045 * 21 19 18 47 47 H 1.07994 * 120.75285 * 179.72113 * 22 18 17 48 48 H 1.08004 * 120.45571 * 179.97438 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4525 1.7103 -1.4426 5 1 2.7835 0.8929 -2.0832 6 6 1.3072 2.5419 -2.0439 7 6 2.3903 3.4191 -2.6936 8 1 2.7042 3.0705 -3.6775 9 8 2.0862 4.8152 -2.6704 10 6 1.8376 5.3774 -3.9604 11 6 0.6462 4.6665 -4.6055 12 6 1.5253 6.8682 -3.8154 13 6 3.0757 5.1996 -4.8415 14 6 3.3233 2.9728 -1.5555 15 6 2.1600 -1.2038 0.0005 16 7 3.4801 -1.1991 0.1009 17 6 4.1778 -2.3194 0.1047 18 6 3.5502 -3.5445 0.0040 19 6 4.3583 -4.8165 0.0090 20 8 3.9599 -5.6298 1.1144 21 14 6.1679 -4.4018 0.1638 22 6 2.1662 -3.5933 -0.1020 23 6 1.4621 -2.4030 -0.1033 24 1 -0.3633 0.0001 1.0276 25 1 -0.3633 0.8900 -0.5139 26 1 -0.3633 -0.8900 -0.5138 27 1 1.6085 2.0284 0.5137 28 1 3.1499 1.1383 0.5138 29 1 0.7002 1.9927 -2.7637 30 1 0.7100 3.0662 -1.2979 31 1 -0.2358 4.7932 -3.9779 32 1 0.4569 5.0951 -5.5897 33 1 0.8693 3.6046 -4.7089 34 1 2.3744 7.3743 -3.3560 35 1 1.3361 7.2971 -4.7995 36 1 0.6433 6.9952 -3.1875 37 1 3.2988 4.1376 -4.9448 38 1 2.8862 5.6288 -5.8253 39 1 3.9245 5.7060 -4.3819 40 1 3.2773 3.6151 -0.6760 41 1 4.3443 2.7715 -1.8797 42 1 5.2537 -2.2770 0.1886 43 1 4.1880 -5.3588 -0.9210 44 1 4.4396 -6.4668 1.1799 45 1 6.4132 -3.6622 1.4280 46 1 6.9782 -5.6460 0.1379 47 1 1.6519 -4.5391 -0.1865 48 1 0.3851 -2.4042 -0.1847 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15093194_13915762.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:09:21 Heat of formation + Delta-G solvation = -2.788562 kcal Electronic energy + Delta-G solvation = -25752.187261 eV Core-core repulsion = 22196.061281 eV Total energy + Delta-G solvation = -3556.125979 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.42614 -40.76958 -38.82676 -37.93740 -36.77444 -33.83106 -33.43615 -32.02973 -29.69661 -28.41911 -28.36533 -27.69489 -26.51851 -25.25666 -24.55569 -23.20436 -21.79507 -20.75402 -20.49581 -18.53504 -18.46659 -17.86724 -17.52413 -16.71894 -16.54893 -16.15592 -15.90171 -15.77459 -15.62777 -15.35199 -14.80208 -14.56791 -14.53577 -14.18540 -13.99623 -13.88301 -13.74039 -13.42877 -13.40148 -13.32104 -13.20435 -13.07008 -12.87665 -12.75868 -12.67365 -12.30918 -12.12251 -11.96721 -11.89488 -11.73421 -11.30158 -11.20778 -10.84315 -10.59399 -10.46562 -10.28071 -10.19593 -8.43796 -4.94487 0.34262 0.53063 1.32358 1.61450 1.96041 1.99185 2.76224 2.89918 3.42049 3.50885 3.61439 3.71099 3.83592 3.87845 3.89653 3.91507 4.01549 4.04480 4.09731 4.13884 4.20277 4.24621 4.36829 4.40273 4.46110 4.51523 4.56691 4.62799 4.72704 4.74494 4.75929 4.79839 4.84670 4.85470 4.87703 4.90190 4.93191 4.98157 5.05468 5.08663 5.13369 5.25226 5.30359 5.35491 5.40696 5.47153 5.64016 6.01030 6.43521 6.46988 6.48407 7.23423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.092 3.908 2 N -0.608 5.608 3 C 0.140 3.860 4 C -0.121 4.121 5 H 0.092 0.908 6 C -0.150 4.150 7 C 0.062 3.938 8 H 0.088 0.912 9 O -0.362 6.362 10 C 0.105 3.895 11 C -0.175 4.175 12 C -0.139 4.139 13 C -0.179 4.179 14 C -0.127 4.127 15 C 0.408 3.592 16 N -0.534 5.534 17 C 0.158 3.842 18 C -0.191 4.191 19 C -0.059 4.059 20 O -0.538 6.538 21 Si 0.674 3.326 22 C -0.004 4.004 23 C -0.241 4.241 24 H 0.053 0.947 25 H 0.074 0.926 26 H 0.071 0.929 27 H 0.074 0.926 28 H 0.090 0.910 29 H 0.064 0.936 30 H 0.088 0.912 31 H 0.063 0.937 32 H 0.065 0.935 33 H 0.057 0.943 34 H 0.063 0.937 35 H 0.070 0.930 36 H 0.063 0.937 37 H 0.059 0.941 38 H 0.067 0.933 39 H 0.065 0.935 40 H 0.091 0.909 41 H 0.073 0.927 42 H 0.154 0.846 43 H 0.073 0.927 44 H 0.378 0.622 45 H -0.253 1.253 46 H -0.260 1.260 47 H 0.133 0.867 48 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.002 -0.002 -3.890 4.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 N -0.320 5.320 3 C 0.017 3.983 4 C -0.141 4.141 5 H 0.110 0.890 6 C -0.187 4.187 7 C 0.004 3.996 8 H 0.106 0.894 9 O -0.282 6.282 10 C 0.066 3.934 11 C -0.233 4.233 12 C -0.196 4.196 13 C -0.236 4.236 14 C -0.165 4.165 15 C 0.173 3.827 16 N -0.251 5.251 17 C 0.000 4.000 18 C -0.196 4.196 19 C -0.170 4.170 20 O -0.345 6.345 21 Si 0.575 3.425 22 C -0.030 4.030 23 C -0.265 4.265 24 H 0.072 0.928 25 H 0.092 0.908 26 H 0.089 0.911 27 H 0.092 0.908 28 H 0.109 0.891 29 H 0.083 0.917 30 H 0.106 0.894 31 H 0.083 0.917 32 H 0.084 0.916 33 H 0.076 0.924 34 H 0.082 0.918 35 H 0.089 0.911 36 H 0.082 0.918 37 H 0.078 0.922 38 H 0.086 0.914 39 H 0.084 0.916 40 H 0.109 0.891 41 H 0.092 0.908 42 H 0.171 0.829 43 H 0.091 0.909 44 H 0.226 0.774 45 H -0.178 1.178 46 H -0.185 1.185 47 H 0.151 0.849 48 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.384 1.505 -3.072 3.443 hybrid contribution -0.834 -2.126 0.159 2.289 sum -1.218 -0.621 -2.913 3.218 Atomic orbital electron populations 1.21758 0.78471 1.03186 1.01676 1.46360 1.04995 1.02700 1.77940 1.21400 0.97789 0.83749 0.95373 1.22729 0.97157 0.96474 0.97708 0.88965 1.23621 0.97062 0.97482 1.00573 1.23614 0.96147 0.81426 0.98407 0.89402 1.88039 1.89666 1.22404 1.28054 1.21518 0.93827 0.94321 0.83750 1.22458 0.98733 1.00750 1.01329 1.21769 1.02604 0.92798 1.02432 1.22468 0.98474 1.02310 1.00383 1.23206 0.98261 0.95951 0.99118 1.18370 0.88380 0.85948 0.89965 1.67174 1.06237 1.30887 1.20765 1.22139 0.98943 0.86528 0.92342 1.19900 0.94838 0.94246 1.10590 1.24515 1.09163 0.92050 0.91245 1.86594 1.64386 1.34293 1.49260 0.95269 0.74524 0.84293 0.88379 1.21138 0.92959 0.97897 0.91021 1.21486 1.01193 0.91709 1.12139 0.92833 0.90765 0.91078 0.90798 0.89125 0.91709 0.89372 0.91749 0.91616 0.92373 0.91762 0.91136 0.91806 0.92248 0.91435 0.91595 0.89055 0.90840 0.82903 0.90865 0.77388 1.17760 1.18548 0.84892 0.84795 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.13 10.28 59.85 0.62 0.48 16 2 N -0.61 -0.53 2.99 -181.72 -0.54 -1.08 16 3 C 0.14 0.05 5.31 -4.04 -0.02 0.03 16 4 C -0.12 0.01 3.96 -89.80 -0.36 -0.34 16 5 H 0.09 0.11 8.14 -51.93 -0.42 -0.32 16 6 C -0.15 0.05 7.04 -25.92 -0.18 -0.13 16 7 C 0.06 0.02 2.82 -25.92 -0.07 -0.05 16 8 H 0.09 0.00 5.54 -51.93 -0.29 -0.29 16 9 O -0.36 -0.73 10.00 -35.23 -0.35 -1.09 16 10 C 0.10 0.05 1.11 -90.62 -0.10 -0.05 16 11 C -0.18 0.06 8.39 37.16 0.31 0.37 16 12 C -0.14 0.01 8.84 37.16 0.33 0.34 16 13 C -0.18 0.05 8.38 37.16 0.31 0.36 16 14 C -0.13 -0.01 7.47 -25.91 -0.19 -0.21 16 15 C 0.41 1.06 7.37 -155.02 -1.14 -0.08 16 16 N -0.53 -1.83 9.08 -12.44 -0.11 -1.95 16 17 C 0.16 0.36 9.84 -17.57 -0.17 0.19 16 18 C -0.19 -0.38 5.43 -104.46 -0.57 -0.95 16 19 C -0.06 -0.02 2.83 36.01 0.10 0.08 16 20 O -0.54 -0.82 12.75 -35.23 -0.45 -1.27 16 21 Si 0.67 -0.34 29.82 -169.99 -5.07 -5.41 16 22 C 0.00 -0.01 9.77 -39.32 -0.38 -0.39 16 23 C -0.24 -0.40 9.27 -39.22 -0.36 -0.76 16 24 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 25 H 0.07 -0.18 7.64 -51.93 -0.40 -0.57 16 26 H 0.07 -0.16 5.98 -51.93 -0.31 -0.47 16 27 H 0.07 -0.03 7.77 -51.93 -0.40 -0.44 16 28 H 0.09 0.16 7.30 -51.93 -0.38 -0.22 16 29 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.09 0.00 7.90 -51.93 -0.41 -0.41 16 31 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 32 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.06 -0.02 7.02 -51.93 -0.36 -0.39 16 34 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 37 H 0.06 -0.03 6.24 -51.93 -0.32 -0.35 16 38 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 39 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.09 0.04 8.10 -51.93 -0.42 -0.38 16 41 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 42 H 0.15 0.04 4.88 -52.49 -0.26 -0.21 16 43 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 44 H 0.38 -0.93 8.74 45.56 0.40 -0.54 16 45 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 46 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 47 H 0.13 0.06 8.06 -52.49 -0.42 -0.36 16 48 H 0.13 -0.04 6.03 -52.48 -0.32 -0.36 16 LS Contribution 375.69 15.07 5.66 5.66 Total: 0.00 -5.91 375.69 -10.91 -16.82 By element: Atomic # 1 Polarization: -2.43 SS G_CDS: -8.16 Total: -10.59 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -1.89 Total: -1.11 kcal Atomic # 7 Polarization: -2.37 SS G_CDS: -0.66 Total: -3.02 kcal Atomic # 8 Polarization: -1.55 SS G_CDS: -0.80 Total: -2.35 kcal Atomic # 14 Polarization: -0.34 SS G_CDS: -5.07 Total: -5.41 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -5.91 -10.91 -16.82 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15093194_13915762.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.030 kcal (2) G-P(sol) polarization free energy of solvation -5.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.819 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds