Wall clock time and date at job start Mon Mar 8 2021 06:09:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33326 * 125.95736 * 2 1 4 4 C 1.50696 * 122.70738 * 359.96907 * 3 2 1 5 5 O 1.42903 * 109.47131 * 329.72878 * 4 3 2 6 6 Si 1.86305 * 109.47185 * 209.73419 * 4 3 2 7 7 N 1.32121 * 114.58065 * 179.69547 * 3 2 1 8 8 C 1.29687 * 116.86620 * 0.27190 * 7 3 2 9 9 N 1.38610 * 124.94721 * 179.97438 * 8 7 3 10 10 C 1.46502 * 119.99830 * 359.97438 * 9 8 7 11 11 C 1.46497 * 119.99672 * 179.97438 * 9 8 7 12 12 C 1.53003 * 109.47130 * 90.00398 * 11 9 8 13 13 H 1.08996 * 112.85208 * 43.79544 * 12 11 9 14 14 C 1.53785 * 113.61592 * 174.99841 * 12 11 9 15 15 C 1.53784 * 87.07832 * 139.97643 * 14 12 11 16 16 H 1.08999 * 113.61359 * 89.20567 * 15 14 12 17 17 O 1.42908 * 113.61140 * 220.01651 * 15 14 12 18 18 C 1.42900 * 113.99885 * 210.00545 * 17 15 14 19 19 C 1.52996 * 109.47290 * 59.99952 * 18 17 15 20 20 C 1.52995 * 109.47212 * 180.02562 * 18 17 15 21 21 C 1.53002 * 109.46742 * 300.00300 * 18 17 15 22 22 C 1.53769 * 87.08396 * 334.56669 * 15 14 12 23 23 S 1.70964 * 110.09953 * 359.97438 * 8 7 3 24 24 H 1.09001 * 109.46966 * 89.99456 * 1 2 3 25 25 H 1.08993 * 109.47394 * 210.00456 * 1 2 3 26 26 H 1.09008 * 109.46529 * 330.00106 * 1 2 3 27 27 H 1.08999 * 109.47358 * 89.73238 * 4 3 2 28 28 H 0.96700 * 114.00311 * 300.00591 * 5 4 3 29 29 H 1.48499 * 109.99670 * 58.67633 * 6 4 3 30 30 H 1.48497 * 110.00233 * 179.97438 * 6 4 3 31 31 H 1.09003 * 109.46844 * 90.00191 * 10 9 8 32 32 H 1.09003 * 109.46486 * 210.00050 * 10 9 8 33 33 H 1.08998 * 109.47289 * 330.00115 * 10 9 8 34 34 H 1.08999 * 109.47108 * 209.99910 * 11 9 8 35 35 H 1.08995 * 109.47327 * 330.00322 * 11 9 8 36 36 H 1.08999 * 113.61033 * 254.52462 * 14 12 11 37 37 H 1.08998 * 113.61228 * 25.43135 * 14 12 11 38 38 H 1.08998 * 109.47511 * 59.99932 * 19 18 17 39 39 H 1.08996 * 109.47087 * 180.02562 * 19 18 17 40 40 H 1.09003 * 109.47385 * 300.00384 * 19 18 17 41 41 H 1.08993 * 109.47257 * 59.99336 * 20 18 17 42 42 H 1.08997 * 109.47580 * 179.97438 * 20 18 17 43 43 H 1.09006 * 109.46784 * 299.99972 * 20 18 17 44 44 H 1.08999 * 109.47618 * 59.99939 * 21 18 17 45 45 H 1.09007 * 109.46602 * 180.02562 * 21 18 17 46 46 H 1.09001 * 109.46989 * 299.99824 * 21 18 17 47 47 H 1.09001 * 113.61758 * 270.88087 * 22 15 14 48 48 H 1.09002 * 113.61690 * 139.98020 * 22 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2899 1.0792 0.0000 4 6 1.7416 2.4829 -0.0007 5 8 0.4847 2.5030 -0.6804 6 14 2.9367 3.6160 -0.8717 7 7 3.5851 0.8186 0.0064 8 6 3.9315 -0.4312 0.0063 9 7 5.2384 -0.8929 0.0119 10 6 6.3516 0.0594 0.0180 11 6 5.5064 -2.3331 0.0117 12 6 5.6065 -2.8331 -1.4308 13 1 6.1937 -2.1720 -2.0681 14 6 6.0074 -4.3135 -1.5434 15 6 4.9843 -4.4223 -2.6863 16 1 5.4009 -4.1973 -3.6681 17 8 4.2324 -5.6374 -2.6677 18 6 3.8167 -6.0835 -3.9601 19 6 5.0473 -6.3274 -4.8357 20 6 3.0239 -7.3845 -3.8200 21 6 2.9332 -5.0156 -4.6083 22 6 4.2523 -3.2351 -2.0388 23 16 2.5412 -1.4261 -0.0018 24 1 -0.3633 0.0001 -1.0277 25 1 -0.3634 -0.8899 0.5139 26 1 -0.3633 0.8901 0.5139 27 1 1.6045 2.8199 1.0268 28 1 0.5313 2.2144 -1.6022 29 1 3.1567 3.1487 -2.2640 30 1 2.4073 5.0034 -0.8797 31 1 6.6229 0.2946 1.0473 32 1 7.2086 -0.3803 -0.4923 33 1 6.0516 0.9724 -0.4963 34 1 6.4454 -2.5280 0.5297 35 1 4.6955 -2.8536 0.5212 36 1 7.0382 -4.4634 -1.8643 37 1 5.7460 -4.9045 -0.6656 38 1 5.6769 -7.0881 -4.3740 39 1 4.7302 -6.6672 -5.8216 40 1 5.6119 -5.4003 -4.9355 41 1 2.1471 -7.2103 -3.1963 42 1 2.7063 -7.7245 -4.8057 43 1 3.6530 -8.1453 -3.3580 44 1 3.4976 -4.0885 -4.7081 45 1 2.6157 -5.3561 -5.5939 46 1 2.0564 -4.8418 -3.9845 47 1 3.5111 -3.5313 -1.2966 48 1 3.8662 -2.5144 -2.7597 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15093194_15704122.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:09:27 Heat of formation + Delta-G solvation = -2.768899 kcal Electronic energy + Delta-G solvation = -26982.073879 eV Core-core repulsion = 23359.563380 eV Total energy + Delta-G solvation = -3622.510499 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.166 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.18725 -40.84631 -39.06498 -37.91200 -36.74645 -33.87906 -32.81056 -30.00108 -29.44840 -28.44684 -28.42503 -27.30276 -26.60274 -25.51998 -24.19544 -22.60803 -20.88819 -20.76184 -20.01943 -19.14086 -17.98920 -17.74750 -17.25835 -16.93343 -16.50758 -16.19351 -15.84092 -15.76410 -15.61984 -15.33634 -14.68646 -14.60390 -14.41835 -14.10985 -13.80521 -13.66355 -13.57516 -13.56746 -13.45182 -13.38101 -13.25426 -13.02802 -12.98514 -12.83937 -12.71760 -12.70100 -12.28809 -12.26587 -12.10515 -11.85518 -11.75462 -11.44884 -11.29868 -10.77786 -10.48373 -10.41756 -10.29244 -9.87494 -8.41166 -4.65392 0.11039 0.24794 0.88855 1.43126 1.79195 1.85057 2.00930 2.16181 2.68559 3.25280 3.37931 3.52950 3.54879 3.69709 3.72588 3.84937 3.92494 4.01173 4.05211 4.08032 4.20891 4.27601 4.31993 4.42840 4.45068 4.52203 4.59177 4.62254 4.65784 4.70895 4.71952 4.74050 4.78334 4.80521 4.85289 4.85403 4.88152 4.93111 4.96013 5.06392 5.09874 5.19040 5.25609 5.27466 5.32808 5.35689 5.70991 6.04814 6.38904 6.39922 7.02384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 C -0.248 4.248 3 C 0.068 3.932 4 C -0.042 4.042 5 O -0.526 6.526 6 Si 0.720 3.280 7 N -0.539 5.539 8 C 0.322 3.678 9 N -0.582 5.582 10 C 0.100 3.900 11 C 0.135 3.865 12 C -0.133 4.133 13 H 0.098 0.902 14 C -0.127 4.127 15 C 0.063 3.937 16 H 0.090 0.910 17 O -0.360 6.360 18 C 0.106 3.894 19 C -0.179 4.179 20 C -0.139 4.139 21 C -0.176 4.176 22 C -0.150 4.150 23 S 0.100 5.900 24 H 0.067 0.933 25 H 0.059 0.941 26 H 0.090 0.910 27 H 0.123 0.877 28 H 0.375 0.625 29 H -0.268 1.268 30 H -0.261 1.261 31 H 0.055 0.945 32 H 0.069 0.931 33 H 0.080 0.920 34 H 0.093 0.907 35 H 0.079 0.921 36 H 0.075 0.925 37 H 0.094 0.906 38 H 0.065 0.935 39 H 0.067 0.933 40 H 0.058 0.942 41 H 0.064 0.936 42 H 0.070 0.930 43 H 0.063 0.937 44 H 0.057 0.943 45 H 0.065 0.935 46 H 0.064 0.936 47 H 0.093 0.907 48 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.245 -2.617 -0.955 4.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.370 4.370 3 C -0.062 4.062 4 C -0.154 4.154 5 O -0.331 6.331 6 Si 0.621 3.379 7 N -0.265 5.265 8 C -0.047 4.047 9 N -0.301 5.301 10 C -0.044 4.044 11 C 0.012 3.988 12 C -0.153 4.153 13 H 0.116 0.884 14 C -0.165 4.165 15 C 0.005 3.995 16 H 0.107 0.893 17 O -0.280 6.280 18 C 0.067 3.933 19 C -0.236 4.236 20 C -0.196 4.196 21 C -0.234 4.234 22 C -0.187 4.187 23 S 0.351 5.649 24 H 0.085 0.915 25 H 0.078 0.922 26 H 0.109 0.891 27 H 0.141 0.859 28 H 0.223 0.777 29 H -0.193 1.193 30 H -0.187 1.187 31 H 0.074 0.926 32 H 0.088 0.912 33 H 0.099 0.901 34 H 0.112 0.888 35 H 0.097 0.903 36 H 0.094 0.906 37 H 0.112 0.888 38 H 0.084 0.916 39 H 0.086 0.914 40 H 0.077 0.923 41 H 0.083 0.917 42 H 0.089 0.911 43 H 0.083 0.917 44 H 0.076 0.924 45 H 0.084 0.916 46 H 0.084 0.916 47 H 0.111 0.889 48 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 3.529 -2.711 -0.870 4.534 hybrid contribution -0.891 0.329 -0.944 1.339 sum 2.638 -2.382 -1.814 3.990 Atomic orbital electron populations 1.20181 0.86679 1.03093 1.02434 1.25168 1.01291 0.93201 1.17374 1.20063 0.86937 0.96989 1.02235 1.24444 0.92005 0.95538 1.03427 1.86603 1.28721 1.89153 1.28660 0.93699 0.86209 0.76365 0.81663 1.65706 1.16813 1.16420 1.27607 1.23271 0.91254 0.91502 0.98709 1.45879 1.00225 1.05912 1.78051 1.21704 0.87512 0.93170 1.02027 1.21653 1.02948 0.78103 0.96112 1.22876 0.98734 0.96642 0.97092 0.88370 1.23227 0.99059 0.94751 0.99497 1.23583 0.92756 0.84839 0.98312 0.89256 1.88039 1.71822 1.40047 1.28060 1.21522 0.93635 0.94600 0.83592 1.22468 0.98316 1.02367 1.00478 1.21768 1.00122 0.95235 1.02500 1.22469 1.00629 0.98869 1.01391 1.23689 0.96632 0.97598 1.00829 1.84062 0.96457 1.10292 1.74049 0.91463 0.92250 0.89144 0.85909 0.77717 1.19305 1.18705 0.92607 0.91220 0.90118 0.88847 0.90309 0.90637 0.88778 0.91581 0.91386 0.92305 0.91738 0.91099 0.91742 0.92409 0.91574 0.91649 0.88852 0.91415 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.06 8.95 36.01 0.32 0.26 16 2 C -0.25 -0.58 6.50 -36.02 -0.23 -0.82 16 3 C 0.07 0.19 5.92 -84.19 -0.50 -0.31 16 4 C -0.04 -0.07 2.82 36.00 0.10 0.03 16 5 O -0.53 -0.81 9.91 -35.23 -0.35 -1.15 16 6 Si 0.72 1.10 32.08 -169.99 -5.45 -4.36 16 7 N -0.54 -1.63 8.16 -11.36 -0.09 -1.72 16 8 C 0.32 0.66 7.74 -87.68 -0.68 -0.01 16 9 N -0.58 0.04 2.98 -183.92 -0.55 -0.51 16 10 C 0.10 -0.15 10.56 59.85 0.63 0.48 16 11 C 0.13 -0.24 5.22 -4.04 -0.02 -0.26 16 12 C -0.13 0.25 3.97 -89.80 -0.36 -0.11 16 13 H 0.10 -0.17 8.14 -51.93 -0.42 -0.60 16 14 C -0.13 0.22 7.47 -25.92 -0.19 0.02 16 15 C 0.06 -0.03 2.82 -25.92 -0.07 -0.10 16 16 H 0.09 -0.08 5.54 -51.93 -0.29 -0.37 16 17 O -0.36 -0.49 10.00 -35.23 -0.35 -0.84 16 18 C 0.11 0.01 1.11 -90.62 -0.10 -0.09 16 19 C -0.18 0.14 8.38 37.16 0.31 0.45 16 20 C -0.14 0.05 8.84 37.16 0.33 0.38 16 21 C -0.18 0.07 8.38 37.16 0.31 0.38 16 22 C -0.15 0.07 6.40 -25.92 -0.17 -0.09 16 23 S 0.10 0.15 19.39 -107.50 -2.08 -1.93 16 24 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 25 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 26 H 0.09 0.12 6.63 -51.92 -0.34 -0.22 16 27 H 0.12 0.11 7.96 -51.93 -0.41 -0.30 16 28 H 0.38 -0.27 8.68 45.56 0.40 0.12 16 29 H -0.27 -1.14 7.11 56.52 0.40 -0.74 16 30 H -0.26 -0.99 7.11 56.52 0.40 -0.59 16 31 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.07 -0.23 8.07 -51.93 -0.42 -0.65 16 33 H 0.08 -0.04 7.62 -51.93 -0.40 -0.44 16 34 H 0.09 -0.31 8.07 -51.93 -0.42 -0.73 16 35 H 0.08 -0.10 6.75 -51.93 -0.35 -0.45 16 36 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 38 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.06 -0.06 6.24 -51.93 -0.32 -0.39 16 41 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 42 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 43 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 44 H 0.06 -0.02 7.02 -51.93 -0.36 -0.39 16 45 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 46 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 47 H 0.09 0.03 6.67 -51.93 -0.35 -0.32 16 48 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 385.04 15.07 5.80 5.80 Total: 0.00 -4.92 385.04 -11.78 -16.69 By element: Atomic # 1 Polarization: -3.80 SS G_CDS: -8.38 Total: -12.18 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -0.31 Total: 0.21 kcal Atomic # 7 Polarization: -1.59 SS G_CDS: -0.64 Total: -2.23 kcal Atomic # 8 Polarization: -1.29 SS G_CDS: -0.70 Total: -1.99 kcal Atomic # 14 Polarization: 1.10 SS G_CDS: -5.45 Total: -4.36 kcal Atomic # 16 Polarization: 0.15 SS G_CDS: -2.08 Total: -1.93 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -4.92 -11.78 -16.69 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15093194_15704122.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.923 kcal (2) G-P(sol) polarization free energy of solvation -4.916 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.776 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.692 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds