Wall clock time and date at job start Mon Mar 8 2021 06:09:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 C 1.46895 * 110.99996 * 2 1 4 4 C 1.52999 * 109.47056 * 66.04707 * 3 2 1 5 5 H 1.08993 * 112.90825 * 316.24939 * 4 3 2 6 6 C 1.53962 * 113.66529 * 87.55186 * 4 3 2 7 7 C 1.53782 * 87.11063 * 139.88900 * 6 4 3 8 8 H 1.08996 * 113.68722 * 89.19879 * 7 6 4 9 9 O 1.42901 * 113.61110 * 220.08969 * 7 6 4 10 10 C 1.42904 * 113.99605 * 247.49723 * 9 7 6 11 11 C 1.52999 * 109.47242 * 60.00153 * 10 9 7 12 12 C 1.53005 * 109.46933 * 180.02562 * 10 9 7 13 13 C 1.52995 * 109.47278 * 300.00124 * 10 9 7 14 14 C 1.53781 * 87.08260 * 334.63747 * 7 6 4 15 15 C 1.39147 * 110.99872 * 236.04765 * 2 1 3 16 16 N 1.32336 * 119.71989 * 123.67988 * 15 2 1 17 17 C 1.32007 * 121.64937 * 179.71003 * 16 15 2 18 18 C 1.37984 * 120.89950 * 0.56862 * 17 16 15 19 19 C 1.50698 * 120.32729 * 179.74268 * 18 17 16 20 20 O 1.42907 * 109.46809 * 119.97703 * 19 18 17 21 21 Si 1.86298 * 109.47277 * 359.97438 * 19 18 17 22 22 C 1.38906 * 119.34514 * 359.72056 * 18 17 16 23 23 C 1.38439 * 118.48549 * 0.02562 * 22 18 17 24 24 F 1.35103 * 120.47178 * 180.02562 * 23 22 18 25 25 H 1.08999 * 109.47011 * 59.99735 * 1 2 3 26 26 H 1.09000 * 109.47198 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.47190 * 300.00012 * 1 2 3 28 28 H 1.09002 * 109.47616 * 306.04529 * 3 2 1 29 29 H 1.09004 * 109.47026 * 186.04606 * 3 2 1 30 30 H 1.08997 * 113.53543 * 25.33574 * 6 4 3 31 31 H 1.08994 * 113.66446 * 254.45777 * 6 4 3 32 32 H 1.09008 * 109.46788 * 59.99854 * 11 10 9 33 33 H 1.08995 * 109.46967 * 179.97438 * 11 10 9 34 34 H 1.09002 * 109.47088 * 300.00173 * 11 10 9 35 35 H 1.09008 * 109.46839 * 60.00174 * 12 10 9 36 36 H 1.09000 * 109.46906 * 180.02562 * 12 10 9 37 37 H 1.08999 * 109.47243 * 300.00427 * 12 10 9 38 38 H 1.08998 * 109.47614 * 60.00015 * 13 10 9 39 39 H 1.09000 * 109.47201 * 179.97438 * 13 10 9 40 40 H 1.09008 * 109.47321 * 300.00332 * 13 10 9 41 41 H 1.09002 * 113.61445 * 139.98212 * 14 7 6 42 42 H 1.09002 * 113.61408 * 270.79943 * 14 7 6 43 43 H 1.07996 * 119.55373 * 180.29121 * 17 16 15 44 44 H 1.08998 * 109.47057 * 239.97525 * 19 18 17 45 45 H 0.96696 * 113.99664 * 179.97438 * 20 19 18 46 46 H 1.48504 * 109.99748 * 59.99977 * 21 19 18 47 47 H 1.48496 * 109.99936 * 181.31729 * 21 19 18 48 48 H 1.07999 * 120.75722 * 179.97438 * 22 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6314 2.0574 1.3183 5 1 0.6015 1.8718 1.6229 6 6 2.6585 1.8229 2.4411 7 6 2.4533 3.2965 2.8301 8 1 1.6488 3.4516 3.5490 9 8 3.6617 3.9653 3.1967 10 6 3.7281 4.3309 4.5766 11 6 3.6273 3.0738 5.4427 12 6 5.0570 5.0367 4.8538 13 6 2.5708 5.2743 4.9104 14 6 2.0318 3.5412 1.3716 15 6 1.9676 -0.7255 -1.0776 16 7 2.7977 -0.1467 -1.9303 17 6 3.2979 -0.8007 -2.9622 18 6 2.9614 -2.1181 -3.1969 19 6 3.5356 -2.8506 -4.3821 20 8 4.2804 -3.9824 -3.9274 21 14 4.6594 -1.7088 -5.3330 22 6 2.0886 -2.7627 -2.3296 23 6 1.5838 -2.0535 -1.2531 24 9 0.7323 -2.6411 -0.3842 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 1.5611 1.9274 -0.8309 29 1 3.0797 1.3443 -0.1082 30 1 3.6614 1.6036 2.0748 31 1 2.3215 1.1194 3.2023 32 1 4.4519 2.4016 5.2048 33 1 3.6783 3.3526 6.4951 34 1 2.6804 2.5713 5.2451 35 1 5.1283 5.9325 4.2367 36 1 5.1078 5.3152 5.9064 37 1 5.8817 4.3650 4.6158 38 1 1.6238 4.7720 4.7128 39 1 2.6211 5.5528 5.9630 40 1 2.6425 6.1701 4.2933 41 1 1.1889 4.2248 1.2695 42 1 2.8632 3.7931 0.7133 43 1 3.9763 -0.2964 -3.6344 44 1 2.7253 -3.1853 -5.0298 45 1 4.6793 -4.5021 -4.6386 46 1 5.7684 -1.2455 -4.4609 47 1 5.2071 -2.4096 -6.5221 48 1 1.8094 -3.7933 -2.4919 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15093194_17656566.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:09:31 Heat of formation + Delta-G solvation = -40.756616 kcal Electronic energy + Delta-G solvation = -28257.445730 eV Core-core repulsion = 24230.219356 eV Total energy + Delta-G solvation = -4027.226373 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.184 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -49.95259 -41.72286 -40.79820 -39.11462 -38.09719 -37.13552 -33.82060 -33.49235 -31.99537 -29.37746 -28.35944 -28.32820 -27.89680 -26.50196 -25.48350 -24.95476 -23.10478 -22.24362 -20.71495 -20.43262 -18.90745 -18.57802 -18.43161 -17.99521 -17.61026 -17.00764 -16.53265 -16.22552 -16.17899 -16.00218 -15.82917 -15.73726 -15.14594 -14.83214 -14.57696 -14.44154 -14.26703 -14.23794 -14.07744 -13.87952 -13.55252 -13.30369 -13.23675 -13.12746 -12.87594 -12.77379 -12.68728 -12.63251 -12.55482 -12.19714 -12.08266 -11.81152 -11.56522 -11.38051 -11.21036 -11.02130 -10.78506 -10.57818 -10.54031 -10.24376 -9.10255 -5.07852 -0.21827 0.00584 1.12976 1.49465 1.86044 2.22920 2.43313 2.80207 3.05967 3.11879 3.28134 3.55308 3.62074 3.70284 3.77653 3.85189 3.88393 3.94298 3.99178 4.04898 4.12182 4.16856 4.17034 4.24736 4.29787 4.42272 4.51008 4.59209 4.59809 4.65676 4.69422 4.77606 4.79666 4.85077 4.87625 4.90156 4.92975 4.93897 4.96880 4.97946 5.11568 5.15622 5.24644 5.33836 5.34145 5.38354 5.51394 5.60422 5.98517 6.30332 6.50709 6.72707 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 N -0.473 5.473 3 C 0.078 3.922 4 C -0.112 4.112 5 H 0.094 0.906 6 C -0.140 4.140 7 C 0.060 3.940 8 H 0.089 0.911 9 O -0.362 6.362 10 C 0.105 3.895 11 C -0.176 4.176 12 C -0.139 4.139 13 C -0.179 4.179 14 C -0.128 4.128 15 C 0.296 3.704 16 N -0.488 5.488 17 C 0.127 3.873 18 C -0.129 4.129 19 C -0.068 4.068 20 O -0.536 6.536 21 Si 0.681 3.319 22 C -0.058 4.058 23 C 0.033 3.967 24 F -0.122 7.122 25 H 0.043 0.957 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.055 0.945 29 H 0.093 0.907 30 H 0.089 0.911 31 H 0.067 0.933 32 H 0.064 0.936 33 H 0.065 0.935 34 H 0.058 0.942 35 H 0.063 0.937 36 H 0.070 0.930 37 H 0.063 0.937 38 H 0.058 0.942 39 H 0.067 0.933 40 H 0.065 0.935 41 H 0.072 0.928 42 H 0.093 0.907 43 H 0.165 0.835 44 H 0.082 0.918 45 H 0.383 0.617 46 H -0.250 1.250 47 H -0.256 1.256 48 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.573 1.324 -2.433 3.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 N -0.189 5.189 3 C -0.048 4.048 4 C -0.131 4.131 5 H 0.112 0.888 6 C -0.178 4.178 7 C 0.002 3.998 8 H 0.106 0.894 9 O -0.281 6.281 10 C 0.066 3.934 11 C -0.233 4.233 12 C -0.196 4.196 13 C -0.236 4.236 14 C -0.166 4.166 15 C 0.062 3.938 16 N -0.201 5.201 17 C -0.031 4.031 18 C -0.133 4.133 19 C -0.178 4.178 20 O -0.343 6.343 21 Si 0.581 3.419 22 C -0.085 4.085 23 C 0.009 3.991 24 F -0.100 7.100 25 H 0.061 0.939 26 H 0.107 0.893 27 H 0.106 0.894 28 H 0.074 0.926 29 H 0.112 0.888 30 H 0.107 0.893 31 H 0.086 0.914 32 H 0.083 0.917 33 H 0.084 0.916 34 H 0.077 0.923 35 H 0.082 0.918 36 H 0.089 0.911 37 H 0.082 0.918 38 H 0.077 0.923 39 H 0.086 0.914 40 H 0.084 0.916 41 H 0.090 0.910 42 H 0.111 0.889 43 H 0.182 0.818 44 H 0.100 0.900 45 H 0.232 0.768 46 H -0.174 1.174 47 H -0.180 1.180 48 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -1.493 2.411 -1.605 3.258 hybrid contribution -0.473 -2.062 -0.350 2.144 sum -1.965 0.349 -1.955 2.794 Atomic orbital electron populations 1.22764 0.83595 1.04636 1.02514 1.59080 1.09440 1.15996 1.34347 1.22083 1.01775 0.84618 0.96331 1.22452 0.99846 0.95529 0.95266 0.88752 1.23547 0.99897 0.96404 0.97952 1.23630 0.87917 0.92521 0.95724 0.89354 1.88043 1.38240 1.76712 1.25088 1.21519 0.96089 0.93721 0.82095 1.22464 1.02631 0.98004 1.00226 1.21769 0.95346 1.00722 1.01772 1.22467 0.98403 1.00233 1.02488 1.23235 1.01503 0.95543 0.96367 1.20017 0.94285 0.90064 0.89404 1.67752 1.12122 1.36990 1.03262 1.22388 0.96230 0.90972 0.93472 1.20016 0.99706 0.95135 0.98408 1.24631 1.00808 0.94154 0.98223 1.86588 1.70579 1.40080 1.37077 0.95161 0.82365 0.85316 0.79093 1.21378 0.94564 1.00817 0.91720 1.18071 0.97084 0.91587 0.92370 1.91474 1.67429 1.83534 1.67582 0.93860 0.89338 0.89365 0.92646 0.88831 0.89265 0.91376 0.91695 0.91639 0.92297 0.91782 0.91147 0.91786 0.92268 0.91444 0.91636 0.90965 0.88878 0.81838 0.90030 0.76842 1.17386 1.18047 0.83079 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.00 9.05 60.06 0.54 0.54 16 2 N -0.47 -0.89 4.74 -180.96 -0.86 -1.74 16 3 C 0.08 0.08 4.05 -3.83 -0.02 0.06 16 4 C -0.11 0.01 3.71 -89.71 -0.33 -0.32 16 5 H 0.09 -0.08 6.26 -51.93 -0.33 -0.41 16 6 C -0.14 -0.13 7.47 -25.82 -0.19 -0.33 16 7 C 0.06 0.05 2.82 -25.92 -0.07 -0.03 16 8 H 0.09 -0.01 5.54 -51.93 -0.29 -0.29 16 9 O -0.36 -0.93 10.00 -35.23 -0.35 -1.29 16 10 C 0.10 0.10 1.11 -90.62 -0.10 0.00 16 11 C -0.18 -0.06 8.39 37.16 0.31 0.26 16 12 C -0.14 -0.06 8.84 37.16 0.33 0.27 16 13 C -0.18 0.01 8.38 37.16 0.31 0.33 16 14 C -0.13 -0.01 7.47 -25.92 -0.19 -0.20 16 15 C 0.30 0.84 6.41 -154.86 -0.99 -0.15 16 16 N -0.49 -1.29 8.61 -12.37 -0.11 -1.39 16 17 C 0.13 0.13 9.84 -17.57 -0.17 -0.05 16 18 C -0.13 -0.10 5.43 -104.47 -0.57 -0.67 16 19 C -0.07 0.08 2.83 36.00 0.10 0.18 16 20 O -0.54 -0.12 12.75 -35.23 -0.45 -0.57 16 21 Si 0.68 -1.32 29.82 -169.99 -5.07 -6.39 16 22 C -0.06 -0.08 9.75 -39.26 -0.38 -0.47 16 23 C 0.03 0.09 6.99 -39.10 -0.27 -0.19 16 24 F -0.12 -0.37 14.79 2.25 0.03 -0.34 16 25 H 0.04 -0.02 8.14 -51.93 -0.42 -0.44 16 26 H 0.09 0.04 5.61 -51.93 -0.29 -0.25 16 27 H 0.09 -0.12 6.29 -51.93 -0.33 -0.45 16 28 H 0.06 0.05 8.12 -51.93 -0.42 -0.37 16 29 H 0.09 0.22 7.23 -51.93 -0.38 -0.15 16 30 H 0.09 0.21 7.90 -51.93 -0.41 -0.20 16 31 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 32 H 0.06 0.06 8.14 -51.92 -0.42 -0.36 16 33 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 34 H 0.06 0.01 7.02 -51.93 -0.36 -0.35 16 35 H 0.06 0.04 8.14 -51.92 -0.42 -0.38 16 36 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 38 H 0.06 -0.02 6.24 -51.93 -0.32 -0.35 16 39 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.06 0.02 8.14 -51.92 -0.42 -0.40 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.09 0.08 8.10 -51.93 -0.42 -0.34 16 43 H 0.17 -0.23 4.88 -52.49 -0.26 -0.48 16 44 H 0.08 -0.25 7.96 -51.93 -0.41 -0.67 16 45 H 0.38 -1.45 8.74 45.56 0.40 -1.05 16 46 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 47 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 48 H 0.15 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 376.84 15.07 5.68 5.68 Total: 0.00 -5.81 376.84 -10.49 -16.30 By element: Atomic # 1 Polarization: -1.83 SS G_CDS: -7.67 Total: -9.50 kcal Atomic # 6 Polarization: 0.94 SS G_CDS: -1.70 Total: -0.76 kcal Atomic # 7 Polarization: -2.17 SS G_CDS: -0.96 Total: -3.14 kcal Atomic # 8 Polarization: -1.05 SS G_CDS: -0.80 Total: -1.85 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.03 Total: -0.34 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.07 Total: -6.39 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -5.81 -10.49 -16.30 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15093194_17656566.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.455 kcal (2) G-P(sol) polarization free energy of solvation -5.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.267 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.490 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.302 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.757 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds